CircRNA Information

General Information
circRNA Basic Information
CircID chr16:75647849|75648040
Strand +
CircType exon
Host Gene ENSG00000166848.5;
Algorism CIRI2;
Sequence ACGGTGCCGCCGCCGTGCAGGATGAGCGTCGACAGCCGACGCTTGGCCGGGCTGGGCCGCACGTAGAAGGACATGGAGCTGCCGTCGTCCCTCACGAACAGAGTCGAGGAATGGGTGGGCCCGTTGGGGTCTTTGCCCAAATCCATCGCCTCCGCCATGTCTGACGCCGAGCACTACTAGAAGAGCTACCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:75647849|75648040 hsa-miR-325 0 0 1
chr16:75647849|75648040 hsa-miR-520f-5p 0 0 1
chr16:75647849|75648040 hsa-miR-520f-3p 0 0 1
chr16:75647849|75648040 hsa-miR-658 0 0 1
chr16:75647849|75648040 hsa-miR-660-5p 0 0 1
chr16:75647849|75648040 hsa-miR-660-3p 0 0 1
chr16:75647849|75648040 hsa-miR-1237-5p 0 0 1
chr16:75647849|75648040 hsa-miR-1237-3p 0 0 1
chr16:75647849|75648040 hsa-miR-1238-5p 0 0 1
chr16:75647849|75648040 hsa-miR-1238-3p 0 0 1
chr16:75647849|75648040 hsa-miR-1290 0 0 1
chr16:75647849|75648040 hsa-miR-1246 0 0 1
chr16:75647849|75648040 hsa-miR-1248 0 0 1
chr16:75647849|75648040 hsa-miR-1307-5p 0 0 1
chr16:75647849|75648040 hsa-miR-1307-3p 0 0 1
chr16:75647849|75648040 hsa-miR-1324 0 0 1
chr16:75647849|75648040 hsa-miR-512-3p 0 0 1
chr16:75647849|75648040 hsa-miR-423-3p 0 0 1
chr16:75647849|75648040 hsa-miR-628-3p 0 0 1
chr16:75647849|75648040 hsa-miR-1244 0 0 1
chr16:75647849|75648040 hsa-miR-574-3p 0 0 1
chr16:75647849|75648040 hsa-miR-876-5p 0 0 1
chr16:75647849|75648040 hsa-miR-663a 1 0 0
chr16:75647849|75648040 hsa-miR-1469 1 0 0
chr16:75647849|75648040 hsa-miR-4660 1 0 0
chr16:75647849|75648040 hsa-miR-7974 1 0 0
chr16:75647849|75648040 hsa-miR-12115 1 0 0
chr16:75647849|75648040 hsa-miR-6894-5p 1 0 0
chr16:75647849|75648040 hsa-miR-197-5p 1 0 0
chr16:75647849|75648040 hsa-miR-2467-5p 1 0 0
chr16:75647849|75648040 hsa-miR-149-3p 1 0 0
chr16:75647849|75648040 hsa-miR-6869-5p 1 0 0
chr16:75647849|75648040 hsa-miR-10400-5p 1 0 0
chr16:75647849|75648040 hsa-miR-6729-5p 1 0 0
chr16:75647849|75648040 hsa-miR-939-5p 1 0 0
chr16:75647849|75648040 hsa-miR-4659b-3p 1 0 0
chr16:75647849|75648040 hsa-miR-4659a-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr16:75647849|75648040
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MELPSSLTNRVEEWVGPLGSLPKSIASAMSDAEHY
Nucleotide Sequence ATGGAGCTGCCGTCGTCCCTCACGAACAGAGTCGAGGAATGGGTGGGCCCGTTGGGGTCTTTGCCCAAATCCATCGCCTCCGCCATGTCTGACGCCGAGCACTACTAG

CircID chr16:75647849|75648040
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MAEAMDLGKDPNGPTHSSTLFVRDDGSSMSFYVRPSPAKRRLSTLILHGGGT
Nucleotide Sequence ATGGCGGAGGCGATGGATTTGGGCAAAGACCCCAACGGGCCCACCCATTCCTCGACTCTGTTCGTGAGGGACGACGGCAGCTCCATGTCCTTCTACGTGCGGCCCAGCCCGGCCAAGCGTCGGCTGTCGACGCTCATCCTGCACGGCGGCGGCACC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites