CircRNA Information

General Information
circRNA Basic Information
CircID chr16:766668|766911
Strand +
CircType exon
Host Gene ENSG00000102854.13;
Algorism CIRI2;
Sequence GTGTCCAGGTCCTGGGGCCTGACCGCCCAGATGCTGCTGGGGGGCACGGAGCTCAGCTCCTCGGGGCTGAGGGAGCACAGGTACCCAGGGTAGAAGGCGGTCAGGGTGTCTAGGGTGTCTTTGTCTAGCTGGCCCCTTCCCTTCACAAAGCGGTCGATCAGGGTGGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:766668|766911 hsa-miR-15a-5p 0 0 1
chr16:766668|766911 hsa-miR-15a-3p 0 0 1
chr16:766668|766911 hsa-miR-107 0 0 1
chr16:766668|766911 hsa-miR-10a-5p 0 0 1
chr16:766668|766911 hsa-miR-10a-3p 0 0 1
chr16:766668|766911 hsa-miR-10b-5p 0 0 1
chr16:766668|766911 hsa-miR-10b-3p 0 0 1
chr16:766668|766911 hsa-miR-15b-5p 0 0 1
chr16:766668|766911 hsa-miR-15b-3p 0 0 1
chr16:766668|766911 hsa-miR-195-5p 0 0 1
chr16:766668|766911 hsa-miR-195-3p 0 0 1
chr16:766668|766911 hsa-miR-424-5p 0 0 1
chr16:766668|766911 hsa-miR-424-3p 0 0 1
chr16:766668|766911 hsa-miR-492 0 0 1
chr16:766668|766911 hsa-miR-497-5p 0 0 1
chr16:766668|766911 hsa-miR-497-3p 0 0 1
chr16:766668|766911 hsa-miR-588 0 0 1
chr16:766668|766911 hsa-miR-612 0 0 1
chr16:766668|766911 hsa-miR-619-5p 0 0 1
chr16:766668|766911 hsa-miR-619-3p 0 0 1
chr16:766668|766911 hsa-miR-631 0 0 1
chr16:766668|766911 hsa-miR-758-5p 0 0 1
chr16:766668|766911 hsa-miR-758-3p 0 0 1
chr16:766668|766911 hsa-miR-708-5p 0 0 1
chr16:766668|766911 hsa-miR-708-3p 0 0 1
chr16:766668|766911 hsa-miR-1225-5p 0 0 1
chr16:766668|766911 hsa-miR-361-3p 0 0 1
chr16:766668|766911 hsa-miR-28-5p 0 0 1
chr16:766668|766911 hsa-miR-369-5p 0 1 1
chr16:766668|766911 hsa-miR-151-5p 0 0 1
chr16:766668|766911 hsa-miR-103 0 0 1
chr16:766668|766911 hsa-miR-16 0 0 1
chr16:766668|766911 hsa-miR-1285 0 0 1
chr16:766668|766911 hsa-miR-151b 0 1 0
chr16:766668|766911 hsa-miR-4305 0 1 0
chr16:766668|766911 hsa-miR-4313 1 0 0
chr16:766668|766911 hsa-miR-4663 0 1 0
chr16:766668|766911 hsa-miR-7515 0 1 0
chr16:766668|766911 hsa-miR-9899 1 0 0
chr16:766668|766911 hsa-miR-6840-3p 0 1 0
chr16:766668|766911 hsa-miR-4665-3p 1 0 0
chr16:766668|766911 hsa-miR-6861-5p 0 1 0
chr16:766668|766911 hsa-miR-874-5p 0 1 0
chr16:766668|766911 hsa-miR-4728-3p 1 0 0
chr16:766668|766911 hsa-miR-345-3p 1 0 0
chr16:766668|766911 hsa-miR-939-3p 1 0 0
chr16:766668|766911 hsa-miR-1908-3p 1 0 0
chr16:766668|766911 hsa-miR-4638-3p 1 1 0
chr16:766668|766911 hsa-miR-6742-3p 0 1 0
chr16:766668|766911 hsa-miR-6786-3p 1 0 0
chr16:766668|766911 hsa-miR-6864-5p 0 1 0
chr16:766668|766911 hsa-miR-4776-3p 1 0 0
chr16:766668|766911 hsa-miR-7106-3p 1 1 0
chr16:766668|766911 hsa-miR-4732-3p 0 1 0
chr16:766668|766911 hsa-miR-6871-3p 1 0 0
chr16:766668|766911 hsa-miR-3605-3p 0 1 0
chr16:766668|766911 hsa-miR-4632-3p 1 0 0
chr16:766668|766911 hsa-miR-6865-3p 1 0 0
chr16:766668|766911 hsa-miR-6880-3p 0 1 0
chr16:766668|766911 hsa-miR-3620-3p 1 1 0
chr16:766668|766911 hsa-miR-1343-5p 1 0 0
chr16:766668|766911 hsa-miR-6797-5p 1 1 0
chr16:766668|766911 hsa-miR-5196-5p 0 1 0
chr16:766668|766911 hsa-miR-6889-5p 0 1 0
chr16:766668|766911 hsa-miR-6845-5p 0 1 0
chr16:766668|766911 hsa-miR-939-5p 1 1 0
chr16:766668|766911 hsa-miR-10396a-3p 0 1 0
chr16:766668|766911 hsa-miR-10396b-3p 0 1 0
chr16:766668|766911 hsa-miR-5008-3p 0 1 0
chr16:766668|766911 hsa-miR-4747-5p 0 1 0
chr16:766668|766911 hsa-miR-10392-3p 1 0 0
chr16:766668|766911 hsa-miR-3150b-5p 1 0 0
chr16:766668|766911 hsa-miR-4701-5p 0 1 0
chr16:766668|766911 hsa-miR-6764-5p 0 1 0
chr16:766668|766911 hsa-miR-151a-5p 0 1 0
chr16:766668|766911 hsa-miR-6737-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:766668|766911
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MGPDRPDAAGGHGAQLLGAEGAQVPRVEGGQGV
Nucleotide Sequence CTGGGGCCTGACCGCCCAGATGCTGCTGGGGGGCACGGAGCTCAGCTCCTCGGGGCTGAGGGAGCACAGGTACCCAGGGTAGAAGGCGGTCAGGGTGTCTAG
CircID chr16:766668|766911
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MIDRFVKGRGQLDKDTLDTLTAFYPGYLCSLSPEELSSVPPSSIWAVRPQDLD
Nucleotide Sequence CTGATCGACCGCTTTGTGAAGGGAAGGGGCCAGCTAGACAAAGACACCCTAGACACCCTGACCGCCTTCTACCCTGGGTACCTGTGCTCCCTCAGCCCCGAGGAGCTGAGCTCCGTGCCCCCCAGCAGCATCTGGGCGGTCAGGCCCCAGGACCTGGAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab