CircRNA Information

General Information
circRNA Basic Information
CircID chr16:796717|797017
Strand +
CircType exon
Host Gene ENSG00000127586.15;
Algorism CIRI2;
Sequence CCCTTTCTCCCCAATGCCCCCCAGCAGACCCTCGAGCCCTGGGGGGCTCCCATCCACCTGTAGGGAGCAGGCATTGTGAGATCTGGCCACACAGGGATACAGTGGGGATGGTGCACGCCCAGACTGCAACCTGCTCCAGAGCCTGGGTGGGCTCACCTGGGGGCTGTTCTCTACCCGGGCAGAAGCCTCCGCCCGCCGCATCTTCTCCACCTCGATCTCGCGGGCGATGAGCTGCTTCGTCTGGTAGGTGAGGGGCTTGCGGGCAGGCAGCTCAGGGAAGCGGCAGAGTTCCTCCACGTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:796717|797017 hsa-miR-22-5p 0 0 1
chr16:796717|797017 hsa-miR-22-3p 0 0 1
chr16:796717|797017 hsa-miR-484 0 0 1
chr16:796717|797017 hsa-miR-552-5p 0 0 1
chr16:796717|797017 hsa-miR-552-3p 0 0 1
chr16:796717|797017 hsa-miR-558 0 1 1
chr16:796717|797017 hsa-miR-585-5p 0 0 1
chr16:796717|797017 hsa-miR-585-3p 0 0 1
chr16:796717|797017 hsa-miR-612 0 0 1
chr16:796717|797017 hsa-miR-622 0 0 1
chr16:796717|797017 hsa-miR-637 1 1 1
chr16:796717|797017 hsa-miR-646 0 0 1
chr16:796717|797017 hsa-miR-657 0 0 1
chr16:796717|797017 hsa-miR-658 0 0 1
chr16:796717|797017 hsa-miR-765 0 0 1
chr16:796717|797017 hsa-miR-760 1 1 1
chr16:796717|797017 hsa-miR-920 0 0 1
chr16:796717|797017 hsa-miR-939-5p 0 0 1
chr16:796717|797017 hsa-miR-939-3p 0 0 1
chr16:796717|797017 hsa-miR-1182 0 1 1
chr16:796717|797017 hsa-miR-663b 0 0 1
chr16:796717|797017 hsa-miR-1253 0 0 1
chr16:796717|797017 hsa-miR-1256 0 0 1
chr16:796717|797017 hsa-miR-125a-3p 0 1 1
chr16:796717|797017 hsa-miR-1225-3p 0 0 1
chr16:796717|797017 hsa-miR-767-5p 0 0 1
chr16:796717|797017 hsa-miR-339-5p 0 0 1
chr16:796717|797017 hsa-miR-361-3p 0 1 1
chr16:796717|797017 hsa-miR-188-5p 0 0 1
chr16:796717|797017 hsa-miR-324-3p 0 0 1
chr16:796717|797017 hsa-miR-125a-5p 0 0 1
chr16:796717|797017 hsa-miR-342-3p 0 0 1
chr16:796717|797017 hsa-miR-1274a 0 0 1
chr16:796717|797017 hsa-miR-1233 0 0 1
chr16:796717|797017 hsa-miR-125b 0 0 1
chr16:796717|797017 hsa-miR-1274b 0 0 1
chr16:796717|797017 hsa-miR-644 0 0 1
chr16:796717|797017 hsa-miR-1285 0 0 1
chr16:796717|797017 hsa-miR-1268 0 0 1
chr16:796717|797017 hsa-miR-516b 0 0 1
chr16:796717|797017 hsa-miR-768-3p 0 0 1
chr16:796717|797017 hsa-miR-147 0 0 1
chr16:796717|797017 hsa-miR-346 1 1 0
chr16:796717|797017 hsa-miR-596 1 1 0
chr16:796717|797017 hsa-miR-614 1 0 0
chr16:796717|797017 hsa-miR-632 1 1 0
chr16:796717|797017 hsa-miR-638 1 0 0
chr16:796717|797017 hsa-miR-3132 1 1 0
chr16:796717|797017 hsa-miR-3155a 1 1 0
chr16:796717|797017 hsa-miR-3188 0 1 0
chr16:796717|797017 hsa-miR-3943 0 1 0
chr16:796717|797017 hsa-miR-3135b 1 0 0
chr16:796717|797017 hsa-miR-3155b 1 1 0
chr16:796717|797017 hsa-miR-4516 0 1 0
chr16:796717|797017 hsa-miR-3960 1 1 0
chr16:796717|797017 hsa-miR-4673 1 0 0
chr16:796717|797017 hsa-miR-4706 1 0 0
chr16:796717|797017 hsa-miR-4736 1 0 0
chr16:796717|797017 hsa-miR-4767 0 1 0
chr16:796717|797017 hsa-miR-5100 0 1 0
chr16:796717|797017 hsa-miR-5787 1 0 0
chr16:796717|797017 hsa-miR-6081 1 1 0
chr16:796717|797017 hsa-miR-6090 1 0 0
chr16:796717|797017 hsa-miR-6134 0 1 0
chr16:796717|797017 hsa-miR-8072 0 1 0
chr16:796717|797017 hsa-miR-12114 0 1 0
chr16:796717|797017 hsa-miR-4435 0 1 0
chr16:796717|797017 hsa-miR-432-3p 0 1 0
chr16:796717|797017 hsa-miR-4731-5p 0 1 0
chr16:796717|797017 hsa-miR-500b-3p 0 1 0
chr16:796717|797017 hsa-miR-4665-3p 1 0 0
chr16:796717|797017 hsa-miR-671-5p 1 0 0
chr16:796717|797017 hsa-miR-25-5p 0 1 0
chr16:796717|797017 hsa-miR-3692-5p 0 1 0
chr16:796717|797017 hsa-miR-766-5p 0 1 0
chr16:796717|797017 hsa-miR-7114-5p 1 0 0
chr16:796717|797017 hsa-miR-6089 1 0 0
chr16:796717|797017 hsa-miR-6880-5p 1 1 0
chr16:796717|797017 hsa-miR-7847-3p 0 1 0
chr16:796717|797017 hsa-miR-3677-5p 1 0 0
chr16:796717|797017 hsa-miR-3928-3p 0 1 0
chr16:796717|797017 hsa-miR-197-5p 0 1 0
chr16:796717|797017 hsa-miR-3189-5p 1 0 0
chr16:796717|797017 hsa-miR-7108-5p 1 0 0
chr16:796717|797017 hsa-miR-6871-5p 0 1 0
chr16:796717|797017 hsa-miR-6827-5p 1 1 0
chr16:796717|797017 hsa-miR-6782-5p 1 0 0
chr16:796717|797017 hsa-miR-6882-3p 1 1 0
chr16:796717|797017 hsa-miR-5088-5p 0 1 0
chr16:796717|797017 hsa-miR-4763-5p 1 1 0
chr16:796717|797017 hsa-miR-6894-3p 1 1 0
chr16:796717|797017 hsa-miR-4640-5p 1 0 0
chr16:796717|797017 hsa-miR-3691-5p 0 1 0
chr16:796717|797017 hsa-miR-4690-5p 1 0 0
chr16:796717|797017 hsa-miR-146b-3p 0 1 0
chr16:796717|797017 hsa-miR-6769a-3p 0 1 0
chr16:796717|797017 hsa-miR-7112-5p 1 0 0
chr16:796717|797017 hsa-miR-490-3p 1 0 0
chr16:796717|797017 hsa-miR-6743-3p 1 0 0
chr16:796717|797017 hsa-miR-4695-3p 0 1 0
chr16:796717|797017 hsa-miR-3619-3p 1 0 0
chr16:796717|797017 hsa-miR-6856-3p 0 1 0
chr16:796717|797017 hsa-miR-518c-5p 0 1 0
chr16:796717|797017 hsa-miR-1285-5p 0 1 0
chr16:796717|797017 hsa-miR-670-5p 0 1 0
chr16:796717|797017 hsa-miR-6775-5p 0 1 0
chr16:796717|797017 hsa-miR-1343-5p 0 1 0
chr16:796717|797017 hsa-miR-6726-5p 1 0 0
chr16:796717|797017 hsa-miR-6743-5p 1 0 0
chr16:796717|797017 hsa-miR-6756-5p 1 0 0
chr16:796717|797017 hsa-miR-6803-5p 1 0 0
chr16:796717|797017 hsa-miR-7110-5p 0 1 0
chr16:796717|797017 hsa-miR-1915-3p 0 1 0
chr16:796717|797017 hsa-miR-328-5p 1 1 0
chr16:796717|797017 hsa-miR-4685-5p 1 1 0
chr16:796717|797017 hsa-miR-6846-5p 1 0 0
chr16:796717|797017 hsa-miR-6885-5p 0 1 0
chr16:796717|797017 hsa-miR-6750-5p 1 1 0
chr16:796717|797017 hsa-miR-4722-3p 1 0 0
chr16:796717|797017 hsa-miR-6893-3p 1 0 0
chr16:796717|797017 hsa-miR-6862-3p 0 1 0
chr16:796717|797017 hsa-miR-6837-5p 0 1 0
chr16:796717|797017 hsa-miR-6764-5p 1 0 0
chr16:796717|797017 hsa-miR-4315 0 1 0
chr16:796717|797017 hsa-miR-3681-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:796717|797017
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence MQPAPEPGWAHLGAVLYPGRSLRPPHLLHLDLAGDELLRLVGEGLAGRQLREAAEFLHV
Nucleotide Sequence CTGCAACCTGCTCCAGAGCCTGGGTGGGCTCACCTGGGGGCTGTTCTCTACCCGGGCAGAAGCCTCCGCCCGCCGCATCTTCTCCACCTCGATCTCGCGGGCGATGAGCTGCTTCGTCTGGTAGGTGAGGGGCTTGCGGGCAGGCAGCTCAGGGAAGCGGCAGAGTTCCTCCACGTT
CircID chr16:796717|797017
ORF Type ORF2
Protein Length 54
Nucleotide Length 165
Protein Sequence MATQGYSGDGARPDCNLLQSLGGLTWGLFSTRAEASARRIFSTSISRAMSCFVW
Nucleotide Sequence CTGGCCACACAGGGATACAGTGGGGATGGTGCACGCCCAGACTGCAACCTGCTCCAGAGCCTGGGTGGGCTCACCTGGGGGCTGTTCTCTACCCGGGCAGAAGCCTCCGCCCGCCGCATCTTCTCCACCTCGATCTCGCGGGCGATGAGCTGCTTCGTCTGGTAG
CircID chr16:796717|797017
ORF Type ORF3
Protein Length 63
Nucleotide Length 192
Protein Sequence MGGSHPPVGSRHCEIWPHRDTVGMVHAQTATCSRAWVGSPGGCSLPGQKPPPAASSPPRSRGR
Nucleotide Sequence CTGGGGGGCTCCCATCCACCTGTAGGGAGCAGGCATTGTGAGATCTGGCCACACAGGGATACAGTGGGGATGGTGCACGCCCAGACTGCAACCTGCTCCAGAGCCTGGGTGGGCTCACCTGGGGGCTGTTCTCTACCCGGGCAGAAGCCTCCGCCCGCCGCATCTTCTCCACCTCGATCTCGCGGGCGATGA
CircID chr16:796717|797017
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MEQVAVWACTIPTVSLCGQISQCLLPTGGWEPPRARGSAGGHWGER
Nucleotide Sequence CTGGAGCAGGTTGCAGTCTGGGCGTGCACCATCCCCACTGTATCCCTGTGTGGCCAGATCTCACAATGCCTGCTCCCTACAGGTGGATGGGAGCCCCCCAGGGCTCGAGGGTCTGCTGGGGGGCATTGGGGAGAAAGG
CircID chr16:796717|797017
ORF Type ORF5
Protein Length 90
Nucleotide Length 270
Protein Sequence MPARKPLTYQTKQLIAREIEVEKMRRAEASARVENSPQVSPPRLWSRLQSGRAPSPLYPCVARSHNACSLQVDGSPPGLEGLLGGIGEKG
Nucleotide Sequence CTGCCTGCCCGCAAGCCCCTCACCTACCAGACGAAGCAGCTCATCGCCCGCGAGATCGAGGTGGAGAAGATGCGGCGGGCGGAGGCTTCTGCCCGGGTAGAGAACAGCCCCCAGGTGAGCCCACCCAGGCTCTGGAGCAGGTTGCAGTCTGGGCGTGCACCATCCCCACTGTATCCCTGTGTGGCCAGATCTCACAATGCCTGCTCCCTACAGGTGGATGGGAGCCCCCCAGGGCTCGAGGGTCTGCTGGGGGGCATTGGGGAGAAAGGG
CircID chr16:796717|797017
ORF Type ORF6
Protein Length 34
Nucleotide Length 105
Protein Sequence MSCLPASPSPTRRSSSSPARSRWRRCGGRRLLPG
Nucleotide Sequence CTGAGCTGCCTGCCCGCAAGCCCCTCACCTACCAGACGAAGCAGCTCATCGCCCGCGAGATCGAGGTGGAGAAGATGCGGCGGGCGGAGGCTTCTGCCCGGGTAG
CircID chr16:796717|797017
ORF Type ORF7
Protein Length 40
Nucleotide Length 120
Protein Sequence MGVHHPHCIPVWPDLTMPAPYRWMGAPQGSRVCWGALGRK
Nucleotide Sequence CTGGGCGTGCACCATCCCCACTGTATCCCTGTGTGGCCAGATCTCACAATGCCTGCTCCCTACAGGTGGATGGGAGCCCCCCAGGGCTCGAGGGTCTGCTGGGGGGCATTGGGGAGAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab