CircRNA Information

General Information
circRNA Basic Information
CircID chr16:83888|83997
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCTTTGATCACTTCCTGCCAAACCTCCCTTTCCTCACCGACTCCTCCGCCGACCCTAAGTCCCCCTGCTGTGCCCACTGCTCCATCCTTGGCAACCTGACCACGCTGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:83888|83997 hsa-miR-96-5p 0 0 1
chr16:83888|83997 hsa-miR-96-3p 0 0 1
chr16:83888|83997 hsa-miR-182-5p 0 0 1
chr16:83888|83997 hsa-miR-182-3p 0 0 1
chr16:83888|83997 hsa-miR-214-5p 0 0 1
chr16:83888|83997 hsa-miR-214-3p 0 0 1
chr16:83888|83997 hsa-miR-503-5p 0 0 1
chr16:83888|83997 hsa-miR-503-3p 0 0 1
chr16:83888|83997 hsa-miR-658 1 1 1
chr16:83888|83997 hsa-miR-1271-5p 0 0 1
chr16:83888|83997 hsa-miR-1271-3p 0 0 1
chr16:83888|83997 hsa-miR-765 1 1 1
chr16:83888|83997 hsa-miR-1182 1 0 1
chr16:83888|83997 hsa-miR-1321 1 0 1
chr16:83888|83997 hsa-miR-1207-5p 1 1 1
chr16:83888|83997 hsa-miR-886-5p 0 0 1
chr16:83888|83997 hsa-miR-1245 0 0 1
chr16:83888|83997 hsa-miR-663a 1 0 0
chr16:83888|83997 hsa-miR-761 0 1 0
chr16:83888|83997 hsa-miR-1268a 1 0 0
chr16:83888|83997 hsa-miR-1469 1 0 0
chr16:83888|83997 hsa-miR-3132 1 0 0
chr16:83888|83997 hsa-miR-3147 1 0 0
chr16:83888|83997 hsa-miR-3154 1 0 0
chr16:83888|83997 hsa-miR-3196 1 0 0
chr16:83888|83997 hsa-miR-3936 1 0 0
chr16:83888|83997 hsa-miR-3945 1 0 0
chr16:83888|83997 hsa-miR-1268b 1 0 0
chr16:83888|83997 hsa-miR-4443 1 0 0
chr16:83888|83997 hsa-miR-4450 1 0 0
chr16:83888|83997 hsa-miR-3135b 1 0 0
chr16:83888|83997 hsa-miR-4467 1 0 0
chr16:83888|83997 hsa-miR-3689c 1 0 0
chr16:83888|83997 hsa-miR-2392 1 1 0
chr16:83888|83997 hsa-miR-4507 1 0 0
chr16:83888|83997 hsa-miR-4510 1 0 0
chr16:83888|83997 hsa-miR-4519 1 1 0
chr16:83888|83997 hsa-miR-4534 1 1 0
chr16:83888|83997 hsa-miR-4651 1 0 0
chr16:83888|83997 hsa-miR-4656 1 0 0
chr16:83888|83997 hsa-miR-4688 1 0 0
chr16:83888|83997 hsa-miR-4689 1 0 0
chr16:83888|83997 hsa-miR-4706 1 0 0
chr16:83888|83997 hsa-miR-4710 1 1 0
chr16:83888|83997 hsa-miR-4721 1 0 0
chr16:83888|83997 hsa-miR-4739 1 1 0
chr16:83888|83997 hsa-miR-4748 1 1 0
chr16:83888|83997 hsa-miR-4784 1 0 0
chr16:83888|83997 hsa-miR-5090 1 0 0
chr16:83888|83997 hsa-miR-5194 1 0 0
chr16:83888|83997 hsa-miR-5572 1 0 0
chr16:83888|83997 hsa-miR-5698 1 0 0
chr16:83888|83997 hsa-miR-5703 1 0 0
chr16:83888|83997 hsa-miR-5787 1 0 0
chr16:83888|83997 hsa-miR-6081 1 1 0
chr16:83888|83997 hsa-miR-6124 1 0 0
chr16:83888|83997 hsa-miR-6127 1 0 0
chr16:83888|83997 hsa-miR-6129 1 0 0
chr16:83888|83997 hsa-miR-6133 1 0 0
chr16:83888|83997 hsa-miR-6165 1 0 0
chr16:83888|83997 hsa-miR-7150 0 1 0
chr16:83888|83997 hsa-miR-7704 1 0 0
chr16:83888|83997 hsa-miR-8072 1 0 0
chr16:83888|83997 hsa-miR-8082 1 1 0
chr16:83888|83997 hsa-miR-12114 1 0 0
chr16:83888|83997 hsa-miR-12115 1 0 0
chr16:83888|83997 hsa-miR-150-3p 1 0 0
chr16:83888|83997 hsa-miR-4433b-3p 1 0 0
chr16:83888|83997 hsa-miR-7106-5p 1 0 0
chr16:83888|83997 hsa-miR-6825-5p 1 0 0
chr16:83888|83997 hsa-miR-6894-5p 1 0 0
chr16:83888|83997 hsa-miR-6857-5p 1 0 0
chr16:83888|83997 hsa-miR-25-5p 1 0 0
chr16:83888|83997 hsa-miR-6799-5p 1 1 0
chr16:83888|83997 hsa-miR-6510-5p 1 1 0
chr16:83888|83997 hsa-miR-6728-5p 1 0 0
chr16:83888|83997 hsa-miR-8071 1 0 0
chr16:83888|83997 hsa-miR-766-5p 1 0 0
chr16:83888|83997 hsa-miR-3622a-5p 1 0 0
chr16:83888|83997 hsa-miR-6757-5p 1 0 0
chr16:83888|83997 hsa-miR-6880-5p 1 0 0
chr16:83888|83997 hsa-miR-7847-3p 1 0 0
chr16:83888|83997 hsa-miR-4722-5p 1 0 0
chr16:83888|83997 hsa-miR-7154-3p 1 0 0
chr16:83888|83997 hsa-miR-6721-5p 1 0 0
chr16:83888|83997 hsa-miR-197-5p 1 0 0
chr16:83888|83997 hsa-miR-6716-5p 1 0 0
chr16:83888|83997 hsa-miR-1292-5p 1 0 0
chr16:83888|83997 hsa-miR-6793-5p 1 0 0
chr16:83888|83997 hsa-miR-6732-5p 1 0 0
chr16:83888|83997 hsa-miR-6805-5p 1 0 0
chr16:83888|83997 hsa-miR-6798-5p 1 0 0
chr16:83888|83997 hsa-miR-1224-5p 1 0 0
chr16:83888|83997 hsa-miR-486-3p 1 0 0
chr16:83888|83997 hsa-miR-6760-5p 1 0 0
chr16:83888|83997 hsa-miR-6782-5p 1 0 0
chr16:83888|83997 hsa-miR-6514-5p 1 0 0
chr16:83888|83997 hsa-miR-3150b-3p 1 0 0
chr16:83888|83997 hsa-miR-6821-5p 1 0 0
chr16:83888|83997 hsa-miR-6810-5p 1 0 0
chr16:83888|83997 hsa-miR-5006-5p 1 1 0
chr16:83888|83997 hsa-miR-3934-3p 1 0 0
chr16:83888|83997 hsa-miR-6786-5p 1 1 0
chr16:83888|83997 hsa-miR-1226-5p 1 0 0
chr16:83888|83997 hsa-miR-1229-5p 1 0 0
chr16:83888|83997 hsa-miR-885-3p 1 0 0
chr16:83888|83997 hsa-miR-1908-5p 1 0 0
chr16:83888|83997 hsa-miR-296-3p 1 0 0
chr16:83888|83997 hsa-miR-6823-5p 1 0 0
chr16:83888|83997 hsa-miR-877-5p 1 0 0
chr16:83888|83997 hsa-miR-4732-5p 1 0 0
chr16:83888|83997 hsa-miR-6834-5p 1 0 0
chr16:83888|83997 hsa-miR-6501-5p 0 1 0
chr16:83888|83997 hsa-miR-4787-5p 1 0 0
chr16:83888|83997 hsa-miR-149-3p 1 0 0
chr16:83888|83997 hsa-miR-6824-5p 1 0 0
chr16:83888|83997 hsa-miR-6802-5p 1 0 0
chr16:83888|83997 hsa-miR-5010-5p 1 0 0
chr16:83888|83997 hsa-miR-6869-5p 1 0 0
chr16:83888|83997 hsa-miR-3191-3p 1 0 0
chr16:83888|83997 hsa-miR-1225-5p 1 0 0
chr16:83888|83997 hsa-miR-3177-3p 1 0 0
chr16:83888|83997 hsa-miR-10400-5p 1 0 0
chr16:83888|83997 hsa-miR-1233-5p 1 0 0
chr16:83888|83997 hsa-miR-1273h-5p 1 0 0
chr16:83888|83997 hsa-miR-3689b-3p 1 0 0
chr16:83888|83997 hsa-miR-4763-3p 1 1 0
chr16:83888|83997 hsa-miR-6769b-5p 1 0 0
chr16:83888|83997 hsa-miR-6778-5p 1 0 0
chr16:83888|83997 hsa-miR-6787-5p 1 0 0
chr16:83888|83997 hsa-miR-6870-5p 1 0 0
chr16:83888|83997 hsa-miR-5001-5p 1 0 0
chr16:83888|83997 hsa-miR-6737-5p 1 0 0
chr16:83888|83997 hsa-miR-6743-5p 1 0 0
chr16:83888|83997 hsa-miR-6752-5p 1 0 0
chr16:83888|83997 hsa-miR-6754-5p 1 0 0
chr16:83888|83997 hsa-miR-6756-5p 1 0 0
chr16:83888|83997 hsa-miR-6769a-5p 1 0 0
chr16:83888|83997 hsa-miR-6851-5p 1 0 0
chr16:83888|83997 hsa-miR-7110-5p 1 0 0
chr16:83888|83997 hsa-miR-10401-5p 1 0 0
chr16:83888|83997 hsa-miR-11181-3p 1 1 0
chr16:83888|83997 hsa-miR-1249-5p 1 0 0
chr16:83888|83997 hsa-miR-6722-3p 1 1 0
chr16:83888|83997 hsa-miR-6763-5p 1 0 0
chr16:83888|83997 hsa-miR-6797-5p 1 0 0
chr16:83888|83997 hsa-miR-6808-5p 1 0 0
chr16:83888|83997 hsa-miR-6879-5p 1 0 0
chr16:83888|83997 hsa-miR-7111-5p 1 0 0
chr16:83888|83997 hsa-miR-4728-5p 1 0 0
chr16:83888|83997 hsa-miR-5189-5p 1 1 0
chr16:83888|83997 hsa-miR-5196-5p 1 0 0
chr16:83888|83997 hsa-miR-6836-5p 1 0 0
chr16:83888|83997 hsa-miR-10396a-5p 1 0 0
chr16:83888|83997 hsa-miR-10396b-5p 1 0 0
chr16:83888|83997 hsa-miR-1909-3p 1 0 0
chr16:83888|83997 hsa-miR-328-5p 1 0 0
chr16:83888|83997 hsa-miR-3689a-3p 1 0 0
chr16:83888|83997 hsa-miR-4685-5p 1 0 0
chr16:83888|83997 hsa-miR-6738-5p 1 0 0
chr16:83888|83997 hsa-miR-675-5p 1 0 0
chr16:83888|83997 hsa-miR-6777-5p 1 0 0
chr16:83888|83997 hsa-miR-6794-5p 1 1 0
chr16:83888|83997 hsa-miR-6795-5p 1 0 0
chr16:83888|83997 hsa-miR-6846-5p 1 0 0
chr16:83888|83997 hsa-miR-6848-5p 1 0 0
chr16:83888|83997 hsa-miR-6858-5p 1 0 0
chr16:83888|83997 hsa-miR-6883-5p 1 0 0
chr16:83888|83997 hsa-miR-6887-5p 1 0 0
chr16:83888|83997 hsa-miR-6889-5p 1 0 0
chr16:83888|83997 hsa-miR-4723-5p 1 0 0
chr16:83888|83997 hsa-miR-939-5p 1 0 0
chr16:83888|83997 hsa-miR-365a-5p 1 1 0
chr16:83888|83997 hsa-miR-365b-5p 1 1 0
chr16:83888|83997 hsa-miR-3940-5p 1 0 0
chr16:83888|83997 hsa-miR-6758-5p 1 0 0
chr16:83888|83997 hsa-miR-1914-3p 1 0 0
chr16:83888|83997 hsa-miR-4665-5p 1 0 0
chr16:83888|83997 hsa-miR-4747-5p 1 0 0
chr16:83888|83997 hsa-miR-4716-3p 1 0 0
chr16:83888|83997 hsa-miR-541-3p 1 1 0
chr16:83888|83997 hsa-miR-6785-5p 1 0 0
chr16:83888|83997 hsa-miR-6718-5p 0 1 0
chr16:83888|83997 hsa-miR-3619-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:83888|83997
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MPNLPFLTDSSADPKSPCCAHCSILGNLTTL
Nucleotide Sequence CTGCCAAACCTCCCTTTCCTCACCGACTCCTCCGCCGACCCTAAGTCCCCCTGCTGTGCCCACTGCTCCATCCTTGGCAACCTGACCACGCTG
CircID chr16:83888|83997
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MITSCQTSLSSPTPPPTLSPPAVPTAPSLAT
Nucleotide Sequence TTGATCACTTCCTGCCAAACCTCCCTTTCCTCACCGACTCCTCCGCCGACCCTAAGTCCCCCTGCTGTGCCCACTGCTCCATCCTTGGCAACCTGA
CircID chr16:83888|83997
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MPRMEQWAQQGDLGSAEESVRKGRFGRK
Nucleotide Sequence TTGCCAAGGATGGAGCAGTGGGCACAGCAGGGGGACTTAGGGTCGGCGGAGGAGTCGGTGAGGAAAGGGAGGTTTGGCAGGAAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab