CircRNA Information

General Information
circRNA Basic Information
CircID chr16:84745372|84745535
Strand -
CircType exon
Host Gene ENSG00000103194.14;
Algorism CIRI2;
Sequence AGCTACCAACGGGGTGGAGTTGCACACCACGGAAAGCATAGACTTGGACCCAACCAAACCCGAGAGTGCATCACCTCCTGCTGACGGCACGGGCTCTGCATCAGGCACCCTTCCTGTCAGCCAGCCCAAGTCCTGGGCCAGCCTCTTTCATGATTCTAAGCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:84745372|84745535 hsa-miR-19a-5p 0 0 1
chr16:84745372|84745535 hsa-miR-19a-3p 0 0 1
chr16:84745372|84745535 hsa-miR-214-5p 0 0 1
chr16:84745372|84745535 hsa-miR-214-3p 0 0 1
chr16:84745372|84745535 hsa-miR-583 0 1 1
chr16:84745372|84745535 hsa-miR-635 0 0 1
chr16:84745372|84745535 hsa-miR-659-5p 0 0 1
chr16:84745372|84745535 hsa-miR-659-3p 0 0 1
chr16:84745372|84745535 hsa-miR-891b 0 0 1
chr16:84745372|84745535 hsa-miR-922 0 0 1
chr16:84745372|84745535 hsa-miR-485-5p 0 1 1
chr16:84745372|84745535 hsa-miR-550 0 0 1
chr16:84745372|84745535 hsa-miR-19b 0 0 1
chr16:84745372|84745535 hsa-miR-1201 0 0 1
chr16:84745372|84745535 hsa-miR-762 1 0 0
chr16:84745372|84745535 hsa-miR-2861 1 0 0
chr16:84745372|84745535 hsa-miR-3176 0 1 0
chr16:84745372|84745535 hsa-miR-4259 1 0 0
chr16:84745372|84745535 hsa-miR-3660 0 1 0
chr16:84745372|84745535 hsa-miR-3945 1 0 0
chr16:84745372|84745535 hsa-miR-1268b 1 0 0
chr16:84745372|84745535 hsa-miR-4498 1 1 0
chr16:84745372|84745535 hsa-miR-4507 1 0 0
chr16:84745372|84745535 hsa-miR-4526 0 1 0
chr16:84745372|84745535 hsa-miR-1587 1 1 0
chr16:84745372|84745535 hsa-miR-4538 1 0 0
chr16:84745372|84745535 hsa-miR-4656 1 0 0
chr16:84745372|84745535 hsa-miR-6165 0 1 0
chr16:84745372|84745535 hsa-miR-8083 0 1 0
chr16:84745372|84745535 hsa-miR-92a-1-5p 1 1 0
chr16:84745372|84745535 hsa-miR-6840-3p 0 1 0
chr16:84745372|84745535 hsa-miR-27a-5p 1 1 0
chr16:84745372|84745535 hsa-miR-6089 1 0 0
chr16:84745372|84745535 hsa-miR-4722-5p 0 1 0
chr16:84745372|84745535 hsa-miR-3064-5p 0 1 0
chr16:84745372|84745535 hsa-miR-6772-5p 1 0 0
chr16:84745372|84745535 hsa-miR-6732-5p 1 0 0
chr16:84745372|84745535 hsa-miR-6798-5p 1 0 0
chr16:84745372|84745535 hsa-miR-3691-3p 0 1 0
chr16:84745372|84745535 hsa-miR-4446-3p 1 0 0
chr16:84745372|84745535 hsa-miR-7154-5p 0 1 0
chr16:84745372|84745535 hsa-miR-7160-3p 0 1 0
chr16:84745372|84745535 hsa-miR-664b-5p 1 0 0
chr16:84745372|84745535 hsa-miR-3678-3p 0 1 0
chr16:84745372|84745535 hsa-miR-5001-5p 0 1 0
chr16:84745372|84745535 hsa-miR-6851-5p 1 0 0
chr16:84745372|84745535 hsa-miR-6722-3p 1 0 0
chr16:84745372|84745535 hsa-miR-3620-5p 1 1 0
chr16:84745372|84745535 hsa-miR-6836-5p 1 0 0
chr16:84745372|84745535 hsa-miR-4685-5p 1 1 0
chr16:84745372|84745535 hsa-miR-3940-5p 1 0 0
chr16:84745372|84745535 hsa-miR-1271-3p 0 1 0
chr16:84745372|84745535 hsa-miR-3689d 0 1 0
chr16:84745372|84745535 hsa-miR-550a-3-5p 0 1 0
chr16:84745372|84745535 hsa-miR-550a-5p 0 1 0
chr16:84745372|84745535 hsa-miR-3619-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr16:84745372|84745535
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MHTTESIDLDPTKPESASPPADGTGSASGTLPVSQPKSWASLFHDSKP
Nucleotide Sequence TTGCACACCACGGAAAGCATAGACTTGGACCCAACCAAACCCGAGAGTGCATCACCTCCTGCTGACGGCACGGGCTCTGCATCAGGCACCCTTCCTGTCAGCCAGCCCAAGTCCTGGGCCAGCCTCTTTCATGATTCTAAGCCC
CircID chr16:84745372|84745535
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MLTARALHQAPFLSASPSPGPASFMILSP
Nucleotide Sequence CTGCTGACGGCACGGGCTCTGCATCAGGCACCCTTCCTGTCAGCCAGCCCAAGTCCTGGGCCAGCCTCTTTCATGATTCTAAGCCCT
CircID chr16:84745372|84745535
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MMQSPCRQQEVMHSRVWLGPSLCFPWCATPPRW
Nucleotide Sequence CTGATGCAGAGCCCGTGCCGTCAGCAGGAGGTGATGCACTCTCGGGTTTGGTTGGGTCCAAGTCTATGCTTTCCGTGGTGTGCAACTCCACCCCGTTGGTAG
CircID chr16:84745372|84745535
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MAQDLGWLTGRVPDAEPVPSAGGDALSGLVGSKSMLSVVCNSTPLVA
Nucleotide Sequence CTGGCCCAGGACTTGGGCTGGCTGACAGGAAGGGTGCCTGATGCAGAGCCCGTGCCGTCAGCAGGAGGTGATGCACTCTCGGGTTTGGTTGGGTCCAAGTCTATGCTTTCCGTGGTGTGCAACTCCACCCCGTTGGTAGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab