CircRNA Information

General Information
circRNA Basic Information
CircID chr16:85668326|85671030
Strand +
CircType exon
Host Gene ENSG00000131149.16;
Algorism CIRI2;
Sequence ATTGTGTCTGTAACACCTGCCGCTCCAGATTTTGCTCTTCTATGTGTTCCTGGTAAGCTTCAAAAACGGCCTCGATCCCTTGCCACTTGCGCTTGGGGACTTCCTCCTCATCTTCTCCATCTTCATCATCCTCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:85668326|85671030 hsa-miR-31-5p 0 0 1
chr16:85668326|85671030 hsa-miR-31-3p 0 0 1
chr16:85668326|85671030 hsa-miR-376c-5p 0 0 1
chr16:85668326|85671030 hsa-miR-376c-3p 0 0 1
chr16:85668326|85671030 hsa-miR-638 1 1 1
chr16:85668326|85671030 hsa-miR-873-5p 0 0 1
chr16:85668326|85671030 hsa-miR-873-3p 0 0 1
chr16:85668326|85671030 hsa-miR-1253 0 0 1
chr16:85668326|85671030 hsa-miR-1272 0 0 1
chr16:85668326|85671030 hsa-miR-548p 0 0 1
chr16:85668326|85671030 hsa-miR-127-5p 0 0 1
chr16:85668326|85671030 hsa-miR-516b 0 0 1
chr16:85668326|85671030 hsa-miR-765 1 0 0
chr16:85668326|85671030 hsa-miR-3154 1 0 0
chr16:85668326|85671030 hsa-miR-3196 1 0 0
chr16:85668326|85671030 hsa-miR-3197 1 0 0
chr16:85668326|85671030 hsa-miR-4271 1 0 0
chr16:85668326|85671030 hsa-miR-3652 1 0 0
chr16:85668326|85671030 hsa-miR-4430 1 0 0
chr16:85668326|85671030 hsa-miR-4458 1 0 0
chr16:85668326|85671030 hsa-miR-3135b 1 0 0
chr16:85668326|85671030 hsa-miR-2392 1 0 0
chr16:85668326|85671030 hsa-miR-4525 1 0 0
chr16:85668326|85671030 hsa-miR-4534 1 1 0
chr16:85668326|85671030 hsa-miR-3960 1 0 0
chr16:85668326|85671030 hsa-miR-4647 1 1 0
chr16:85668326|85671030 hsa-miR-4739 1 0 0
chr16:85668326|85671030 hsa-miR-5192 1 0 0
chr16:85668326|85671030 hsa-miR-5703 0 1 0
chr16:85668326|85671030 hsa-miR-5787 1 0 0
chr16:85668326|85671030 hsa-miR-6088 1 0 0
chr16:85668326|85671030 hsa-miR-7150 1 0 0
chr16:85668326|85671030 hsa-miR-7704 1 0 0
chr16:85668326|85671030 hsa-miR-8063 0 1 0
chr16:85668326|85671030 hsa-miR-8072 1 0 0
chr16:85668326|85671030 hsa-miR-12114 1 0 0
chr16:85668326|85671030 hsa-miR-12115 1 0 0
chr16:85668326|85671030 hsa-miR-12128 1 0 0
chr16:85668326|85671030 hsa-miR-4433b-3p 1 0 0
chr16:85668326|85671030 hsa-miR-128-1-5p 1 0 0
chr16:85668326|85671030 hsa-miR-504-3p 1 0 0
chr16:85668326|85671030 hsa-miR-1247-3p 1 0 0
chr16:85668326|85671030 hsa-miR-4433a-3p 1 0 0
chr16:85668326|85671030 hsa-miR-6765-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6894-5p 1 1 0
chr16:85668326|85671030 hsa-miR-6510-5p 1 0 0
chr16:85668326|85671030 hsa-miR-766-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6833-5p 1 0 0
chr16:85668326|85671030 hsa-miR-1236-5p 1 0 0
chr16:85668326|85671030 hsa-miR-5187-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6089 1 0 0
chr16:85668326|85671030 hsa-miR-6757-5p 1 0 0
chr16:85668326|85671030 hsa-miR-7154-3p 1 0 0
chr16:85668326|85671030 hsa-miR-6727-5p 1 0 0
chr16:85668326|85671030 hsa-miR-3682-3p 1 0 0
chr16:85668326|85671030 hsa-miR-3605-5p 1 0 0
chr16:85668326|85671030 hsa-miR-3180-3p 1 0 0
chr16:85668326|85671030 hsa-miR-6760-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6782-5p 1 0 0
chr16:85668326|85671030 hsa-miR-3156-5p 1 1 0
chr16:85668326|85671030 hsa-miR-7855-5p 1 0 0
chr16:85668326|85671030 hsa-miR-3691-5p 1 0 0
chr16:85668326|85671030 hsa-miR-877-5p 1 0 0
chr16:85668326|85671030 hsa-miR-4732-5p 1 0 0
chr16:85668326|85671030 hsa-miR-149-3p 1 0 0
chr16:85668326|85671030 hsa-miR-2276-3p 1 0 0
chr16:85668326|85671030 hsa-miR-5010-5p 1 0 0
chr16:85668326|85671030 hsa-miR-7846-3p 1 0 0
chr16:85668326|85671030 hsa-miR-1207-5p 1 0 0
chr16:85668326|85671030 hsa-miR-1233-5p 1 0 0
chr16:85668326|85671030 hsa-miR-4763-3p 1 0 0
chr16:85668326|85671030 hsa-miR-6769b-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6816-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6893-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6743-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6815-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6851-5p 1 0 0
chr16:85668326|85671030 hsa-miR-11181-3p 1 0 0
chr16:85668326|85671030 hsa-miR-1249-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6722-3p 1 0 0
chr16:85668326|85671030 hsa-miR-6808-5p 1 0 0
chr16:85668326|85671030 hsa-miR-7111-5p 1 0 0
chr16:85668326|85671030 hsa-miR-4728-5p 1 0 0
chr16:85668326|85671030 hsa-miR-5196-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6780b-5p 1 0 0
chr16:85668326|85671030 hsa-miR-1909-3p 1 0 0
chr16:85668326|85671030 hsa-miR-328-5p 1 0 0
chr16:85668326|85671030 hsa-miR-4649-5p 1 0 0
chr16:85668326|85671030 hsa-miR-4701-3p 1 0 0
chr16:85668326|85671030 hsa-miR-6729-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6846-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6848-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6858-5p 1 1 0
chr16:85668326|85671030 hsa-miR-6831-5p 1 0 0
chr16:85668326|85671030 hsa-miR-1238-5p 1 0 0
chr16:85668326|85671030 hsa-miR-4769-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6856-5p 1 0 0
chr16:85668326|85671030 hsa-miR-3679-5p 1 0 0
chr16:85668326|85671030 hsa-miR-6884-5p 1 0 0
chr16:85668326|85671030 hsa-miR-1255b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:85668326|85671030
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MPLQILLFYVFLVSFKNGLDPLPLALGDFLLIFSIFIIL
Nucleotide Sequence CTGCCGCTCCAGATTTTGCTCTTCTATGTGTTCCTGGTAAGCTTCAAAAACGGCCTCGATCCCTTGCCACTTGCGCTTGGGGACTTCCTCCTCATCTTCTCCATCTTCATCATCCTC
CircID chr16:85668326|85671030
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MMKMEKMRRKSPSASGKGSRPFLKLTRNT
Nucleotide Sequence ATGATGAAGATGGAGAAGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTTTTTGAAGCTTACCAGGAACACATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab