CircRNA Information

General Information
circRNA Basic Information
CircID chr16:85806510|85806695
Strand -
CircType exon
Host Gene ENSG00000131143.7;
Algorism CIRI2;
Sequence CTTCTGCTTTTAGCTTATTTTGTTGCTAACTTTTTACAAACAAAGGGCTAATTTTAAAATGTCAGTGTTGTCAGTGGTCAGAAACCGTGTGTTTGAGCGGGTGTTGAGTGGCAGGTGGCTCTGCTGACCTGGTGGCTGGTGTGTCGGGAGGATTTAACCTGTGTGAGGGATTGGCCTAGAAACAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:85806510|85806695 hsa-miR-214-5p 0 0 1
chr16:85806510|85806695 hsa-miR-214-3p 0 0 1
chr16:85806510|85806695 hsa-miR-141-5p 0 0 1
chr16:85806510|85806695 hsa-miR-141-3p 0 0 1
chr16:85806510|85806695 hsa-miR-200a-5p 0 0 1
chr16:85806510|85806695 hsa-miR-200a-3p 0 0 1
chr16:85806510|85806695 hsa-miR-377-5p 0 0 1
chr16:85806510|85806695 hsa-miR-377-3p 0 0 1
chr16:85806510|85806695 hsa-miR-605-5p 0 0 1
chr16:85806510|85806695 hsa-miR-605-3p 0 0 1
chr16:85806510|85806695 hsa-miR-645 0 0 1
chr16:85806510|85806695 hsa-miR-298 0 0 1
chr16:85806510|85806695 hsa-miR-922 0 0 1
chr16:85806510|85806695 hsa-miR-1226-5p 0 0 1
chr16:85806510|85806695 hsa-miR-1226-3p 0 0 1
chr16:85806510|85806695 hsa-miR-342-3p 0 1 1
chr16:85806510|85806695 hsa-miR-362-3p 0 0 1
chr16:85806510|85806695 hsa-miR-371-5p 0 0 1
chr16:85806510|85806695 hsa-miR-129-3p 0 0 1
chr16:85806510|85806695 hsa-miR-329 0 0 1
chr16:85806510|85806695 hsa-miR-549 0 0 1
chr16:85806510|85806695 hsa-miR-4252 0 1 0
chr16:85806510|85806695 hsa-miR-4526 1 0 0
chr16:85806510|85806695 hsa-miR-5704 0 1 0
chr16:85806510|85806695 hsa-miR-668-3p 1 0 0
chr16:85806510|85806695 hsa-miR-181a-2-3p 0 1 0
chr16:85806510|85806695 hsa-miR-3194-5p 1 1 0
chr16:85806510|85806695 hsa-miR-4691-3p 0 1 0
chr16:85806510|85806695 hsa-miR-4733-3p 0 1 0
chr16:85806510|85806695 hsa-miR-6743-3p 1 0 0
chr16:85806510|85806695 hsa-miR-6730-3p 0 1 0
chr16:85806510|85806695 hsa-miR-6804-3p 0 1 0
chr16:85806510|85806695 hsa-miR-3180-5p 1 0 0
chr16:85806510|85806695 hsa-miR-597-5p 1 0 0
chr16:85806510|85806695 hsa-miR-767-3p 0 1 0
chr16:85806510|85806695 hsa-miR-4722-3p 0 1 0
chr16:85806510|85806695 hsa-miR-6727-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr16:85806510|85806695
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MLLTFYKQRANFKMSVLSVVRNRVFERVLSGRWLC
Nucleotide Sequence TTGTTGCTAACTTTTTACAAACAAAGGGCTAATTTTAAAATGTCAGTGTTGTCAGTGGTCAGAAACCGTGTGTTTGAGCGGGTGTTGAGTGGCAGGTGGCTCTGCTGA

CircID chr16:85806510|85806695
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MPLNTRSNTRFLTTDNTDILKLALCL
Nucleotide Sequence CTGCCACTCAACACCCGCTCAAACACACGGTTTCTGACCACTGACAACACTGACATTTTAAAATTAGCCCTTTGTTTGTAA

CircID chr16:85806510|85806695
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence LFLGQSLTQVKSSRHTSHQVSRATCHSTPAQTHGF
Nucleotide Sequence TTGTTTCTAGGCCAATCCCTCACACAGGTTAAATCCTCCCGACACACCAGCCACCAGGTCAGCAGAGCCACCTGCCACTCAACACCCGCTCAAACACACGGTTTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites