CircRNA Information

General Information
circRNA Basic Information
CircID chr16:85905564|85905726
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGACCGAGGTTGACTTCATCCAACAGCCAAAGATCTATCCGGCCAACGTCACAGAGACAGGCCTCTCAGAGGATGGATGGGAAGAAGCATAGCTCAGGGAAGCACATGATGGGCTCTTGCTGGCGCCATGTCTCCACCGGCACTGGTGGCCCTCCCGATGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:85905564|85905726 hsa-miR-335-5p 0 0 1
chr16:85905564|85905726 hsa-miR-335-3p 0 0 1
chr16:85905564|85905726 hsa-miR-593-5p 0 0 1
chr16:85905564|85905726 hsa-miR-593-3p 0 0 1
chr16:85905564|85905726 hsa-miR-610 0 0 1
chr16:85905564|85905726 hsa-miR-636 0 0 1
chr16:85905564|85905726 hsa-miR-647 0 0 1
chr16:85905564|85905726 hsa-miR-652-5p 0 0 1
chr16:85905564|85905726 hsa-miR-652-3p 0 0 1
chr16:85905564|85905726 hsa-miR-1255a 0 0 1
chr16:85905564|85905726 hsa-miR-1306-5p 0 0 1
chr16:85905564|85905726 hsa-miR-1306-3p 0 0 1
chr16:85905564|85905726 hsa-miR-1825 0 0 1
chr16:85905564|85905726 hsa-miR-566 0 0 1
chr16:85905564|85905726 hsa-miR-125a-5p 0 1 1
chr16:85905564|85905726 hsa-miR-516a-3p 0 0 1
chr16:85905564|85905726 hsa-miR-1274a 0 0 1
chr16:85905564|85905726 hsa-miR-125b 0 0 1
chr16:85905564|85905726 hsa-miR-1255b 0 0 1
chr16:85905564|85905726 hsa-miR-9 0 0 1
chr16:85905564|85905726 hsa-miR-218 0 0 1
chr16:85905564|85905726 hsa-miR-371-3p 0 0 1
chr16:85905564|85905726 hsa-miR-4319 0 1 0
chr16:85905564|85905726 hsa-miR-4721 1 1 0
chr16:85905564|85905726 hsa-miR-451b 0 1 0
chr16:85905564|85905726 hsa-miR-12119 1 0 0
chr16:85905564|85905726 hsa-miR-4687-3p 1 1 0
chr16:85905564|85905726 hsa-miR-6089 1 0 0
chr16:85905564|85905726 hsa-miR-6880-5p 0 1 0
chr16:85905564|85905726 hsa-miR-6875-3p 0 1 0
chr16:85905564|85905726 hsa-miR-3189-5p 1 0 0
chr16:85905564|85905726 hsa-miR-6810-5p 0 1 0
chr16:85905564|85905726 hsa-miR-6786-5p 1 0 0
chr16:85905564|85905726 hsa-miR-7161-3p 0 1 0
chr16:85905564|85905726 hsa-miR-6771-5p 1 1 0
chr16:85905564|85905726 hsa-miR-4743-5p 0 1 0
chr16:85905564|85905726 hsa-miR-149-3p 0 1 0
chr16:85905564|85905726 hsa-miR-6781-5p 1 0 0
chr16:85905564|85905726 hsa-miR-7151-5p 0 1 0
chr16:85905564|85905726 hsa-miR-3670 0 1 0
chr16:85905564|85905726 hsa-miR-670-5p 0 1 0
chr16:85905564|85905726 hsa-miR-4712-3p 0 1 0
chr16:85905564|85905726 hsa-miR-6815-5p 1 0 0
chr16:85905564|85905726 hsa-miR-6779-5p 1 0 0
chr16:85905564|85905726 hsa-miR-10396b-5p 1 0 0
chr16:85905564|85905726 hsa-miR-6885-5p 1 0 0
chr16:85905564|85905726 hsa-miR-6785-5p 1 1 0
chr16:85905564|85905726 hsa-miR-6753-3p 1 1 0
chr16:85905564|85905726 hsa-miR-5699-3p 0 1 0
chr16:85905564|85905726 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:85905564|85905726
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence LTEVDFIQQPKIYPANVTETGLSEDGWEEA
Nucleotide Sequence CTGACCGAGGTTGACTTCATCCAACAGCCAAAGATCTATCCGGCCAACGTCACAGAGACAGGCCTCTCAGAGGATGGATGGGAAGAAGCATAG

CircID chr16:85905564|85905726
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MTSSNSQRSIRPTSQRQASQRMDGKKHSSGKHMMGSCWRHVSTGTGGPPDG
Nucleotide Sequence TTGACTTCATCCAACAGCCAAAGATCTATCCGGCCAACGTCACAGAGACAGGCCTCTCAGAGGATGGATGGGAAGAAGCATAGCTCAGGGAAGCACATGATGGGCTCTTGCTGGCGCCATGTCTCCACCGGCACTGGTGGCCCTCCCGATGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites