CircRNA Information

General Information
circRNA Basic Information
CircID chr16:88738051|88738379
Strand +
CircType exon
Host Gene ENSG00000103335.18;
Algorism CIRI2;
Sequence CTGGTGGGCCTGCCACTTTCCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGTGGGGTGCTTCGGCGCCGGCCATCTCATCTGCCTCTACTGCTACCAGATGCCCTTGGCACAGGCTCTGCTCCCGCCTGCCGGCATCTGGGCTAGGTAACGGCTTGCCACACAGCCCCTTTTTCCTGCCACCCTGGTCCCGCCCACCTGGCTCGTCTAGCCCCTGTGGCCCCACTGCCTCTGGGGTGGTAGGCTGTGACGGGTCTTCTCTGGACAGGGTGCTGGGTCTCAAGGACTTCGTGGGTCCCACCAACTGCTCCAGCCCCCACGCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:88738051|88738379 hsa-miR-31-5p 0 0 1
chr16:88738051|88738379 hsa-miR-31-3p 0 0 1
chr16:88738051|88738379 hsa-miR-198 0 1 1
chr16:88738051|88738379 hsa-miR-10a-5p 0 0 1
chr16:88738051|88738379 hsa-miR-10a-3p 0 0 1
chr16:88738051|88738379 hsa-miR-10b-5p 0 0 1
chr16:88738051|88738379 hsa-miR-10b-3p 0 0 1
chr16:88738051|88738379 hsa-miR-34a-5p 0 0 1
chr16:88738051|88738379 hsa-miR-34a-3p 0 0 1
chr16:88738051|88738379 hsa-miR-143-5p 0 0 1
chr16:88738051|88738379 hsa-miR-143-3p 0 0 1
chr16:88738051|88738379 hsa-miR-449a 0 0 1
chr16:88738051|88738379 hsa-miR-449b-5p 0 0 1
chr16:88738051|88738379 hsa-miR-449b-3p 0 0 1
chr16:88738051|88738379 hsa-miR-541-5p 0 0 1
chr16:88738051|88738379 hsa-miR-541-3p 0 0 1
chr16:88738051|88738379 hsa-miR-936 0 1 1
chr16:88738051|88738379 hsa-miR-1227-5p 0 0 1
chr16:88738051|88738379 hsa-miR-1227-3p 0 0 1
chr16:88738051|88738379 hsa-miR-1253 0 0 1
chr16:88738051|88738379 hsa-miR-1827 0 0 1
chr16:88738051|88738379 hsa-miR-769-5p 0 0 1
chr16:88738051|88738379 hsa-miR-512-3p 0 0 1
chr16:88738051|88738379 hsa-miR-339-5p 0 1 1
chr16:88738051|88738379 hsa-miR-654-5p 0 0 1
chr16:88738051|88738379 hsa-miR-525-5p 0 0 1
chr16:88738051|88738379 hsa-miR-1207-5p 0 0 1
chr16:88738051|88738379 hsa-miR-520a-5p 0 0 1
chr16:88738051|88738379 hsa-miR-34c-5p 0 0 1
chr16:88738051|88738379 hsa-miR-1280 0 0 1
chr16:88738051|88738379 hsa-miR-220c 0 0 1
chr16:88738051|88738379 hsa-miR-644 0 0 1
chr16:88738051|88738379 hsa-miR-147 0 0 1
chr16:88738051|88738379 hsa-miR-608 1 0 0
chr16:88738051|88738379 hsa-miR-662 1 0 0
chr16:88738051|88738379 hsa-miR-663a 1 0 0
chr16:88738051|88738379 hsa-miR-762 1 1 0
chr16:88738051|88738379 hsa-miR-1293 1 0 0
chr16:88738051|88738379 hsa-miR-1538 1 0 0
chr16:88738051|88738379 hsa-miR-2278 0 1 0
chr16:88738051|88738379 hsa-miR-711 0 1 0
chr16:88738051|88738379 hsa-miR-2861 1 0 0
chr16:88738051|88738379 hsa-miR-3141 1 0 0
chr16:88738051|88738379 hsa-miR-3148 0 1 0
chr16:88738051|88738379 hsa-miR-3153 0 1 0
chr16:88738051|88738379 hsa-miR-3196 1 0 0
chr16:88738051|88738379 hsa-miR-4321 1 0 0
chr16:88738051|88738379 hsa-miR-3936 1 0 0
chr16:88738051|88738379 hsa-miR-3937 1 1 0
chr16:88738051|88738379 hsa-miR-4447 0 1 0
chr16:88738051|88738379 hsa-miR-3135b 1 1 0
chr16:88738051|88738379 hsa-miR-4489 0 1 0
chr16:88738051|88738379 hsa-miR-4492 0 1 0
chr16:88738051|88738379 hsa-miR-4498 1 1 0
chr16:88738051|88738379 hsa-miR-4507 1 0 0
chr16:88738051|88738379 hsa-miR-4508 1 0 0
chr16:88738051|88738379 hsa-miR-4530 1 0 0
chr16:88738051|88738379 hsa-miR-1587 1 0 0
chr16:88738051|88738379 hsa-miR-4651 1 0 0
chr16:88738051|88738379 hsa-miR-4656 1 0 0
chr16:88738051|88738379 hsa-miR-4675 0 1 0
chr16:88738051|88738379 hsa-miR-4741 1 1 0
chr16:88738051|88738379 hsa-miR-4751 0 1 0
chr16:88738051|88738379 hsa-miR-5682 0 1 0
chr16:88738051|88738379 hsa-miR-6081 1 1 0
chr16:88738051|88738379 hsa-miR-6085 1 1 0
chr16:88738051|88738379 hsa-miR-7150 0 1 0
chr16:88738051|88738379 hsa-miR-7706 1 0 0
chr16:88738051|88738379 hsa-miR-7974 1 0 0
chr16:88738051|88738379 hsa-miR-8075 1 1 0
chr16:88738051|88738379 hsa-miR-12122 0 1 0
chr16:88738051|88738379 hsa-miR-127-5p 0 1 0
chr16:88738051|88738379 hsa-miR-6765-5p 1 0 0
chr16:88738051|88738379 hsa-miR-671-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4687-3p 1 0 0
chr16:88738051|88738379 hsa-miR-6089 1 0 0
chr16:88738051|88738379 hsa-miR-1225-3p 1 0 0
chr16:88738051|88738379 hsa-miR-4695-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4722-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4655-5p 1 0 0
chr16:88738051|88738379 hsa-miR-7108-5p 1 0 0
chr16:88738051|88738379 hsa-miR-3151-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6748-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6796-5p 0 1 0
chr16:88738051|88738379 hsa-miR-185-3p 0 1 0
chr16:88738051|88738379 hsa-miR-6732-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6798-5p 1 0 0
chr16:88738051|88738379 hsa-miR-2467-3p 0 1 0
chr16:88738051|88738379 hsa-miR-6782-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6821-5p 0 1 0
chr16:88738051|88738379 hsa-miR-5008-5p 1 0 0
chr16:88738051|88738379 hsa-miR-5006-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6786-5p 1 1 0
chr16:88738051|88738379 hsa-miR-7109-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4640-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6753-5p 1 1 0
chr16:88738051|88738379 hsa-miR-1228-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6823-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4787-5p 1 0 0
chr16:88738051|88738379 hsa-miR-149-3p 1 0 0
chr16:88738051|88738379 hsa-miR-6824-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6789-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6781-5p 1 0 0
chr16:88738051|88738379 hsa-miR-194-3p 0 1 0
chr16:88738051|88738379 hsa-miR-4776-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6866-5p 0 1 0
chr16:88738051|88738379 hsa-miR-3678-3p 0 1 0
chr16:88738051|88738379 hsa-miR-744-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6871-3p 0 1 0
chr16:88738051|88738379 hsa-miR-1914-5p 0 1 0
chr16:88738051|88738379 hsa-miR-1296-3p 0 1 0
chr16:88738051|88738379 hsa-miR-1287-3p 0 1 0
chr16:88738051|88738379 hsa-miR-4796-3p 0 1 0
chr16:88738051|88738379 hsa-miR-5007-5p 0 1 0
chr16:88738051|88738379 hsa-miR-10400-5p 1 0 0
chr16:88738051|88738379 hsa-miR-1233-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4763-3p 1 0 0
chr16:88738051|88738379 hsa-miR-6769b-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6778-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6787-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6816-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6865-5p 1 1 0
chr16:88738051|88738379 hsa-miR-5001-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6743-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6752-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6754-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6756-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6813-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6842-5p 1 0 0
chr16:88738051|88738379 hsa-miR-1249-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6722-3p 1 1 0
chr16:88738051|88738379 hsa-miR-6779-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6797-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6808-5p 0 1 0
chr16:88738051|88738379 hsa-miR-6875-5p 1 0 0
chr16:88738051|88738379 hsa-miR-3620-5p 1 0 0
chr16:88738051|88738379 hsa-miR-10396a-5p 1 0 0
chr16:88738051|88738379 hsa-miR-10396b-5p 1 0 0
chr16:88738051|88738379 hsa-miR-10526-3p 1 1 0
chr16:88738051|88738379 hsa-miR-1237-5p 1 0 0
chr16:88738051|88738379 hsa-miR-328-5p 1 0 0
chr16:88738051|88738379 hsa-miR-449c-5p 0 1 0
chr16:88738051|88738379 hsa-miR-4685-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4726-5p 1 1 0
chr16:88738051|88738379 hsa-miR-4745-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4749-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6729-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6795-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6846-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6848-5p 1 1 0
chr16:88738051|88738379 hsa-miR-6885-5p 1 0 0
chr16:88738051|88738379 hsa-miR-4758-5p 1 0 0
chr16:88738051|88738379 hsa-miR-1910-3p 0 1 0
chr16:88738051|88738379 hsa-miR-6511a-5p 1 1 0
chr16:88738051|88738379 hsa-miR-10396a-3p 1 0 0
chr16:88738051|88738379 hsa-miR-10396b-3p 1 0 0
chr16:88738051|88738379 hsa-miR-6773-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6766-5p 0 1 0
chr16:88738051|88738379 hsa-miR-3184-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6762-5p 1 1 0
chr16:88738051|88738379 hsa-miR-769-3p 0 1 0
chr16:88738051|88738379 hsa-miR-3928-5p 1 0 0
chr16:88738051|88738379 hsa-miR-6837-5p 1 0 0
chr16:88738051|88738379 hsa-miR-10392-3p 1 0 0
chr16:88738051|88738379 hsa-miR-125a-5p 0 1 0
chr16:88738051|88738379 hsa-miR-3130-5p 0 1 0
chr16:88738051|88738379 hsa-miR-498-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:88738051|88738379
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence LVGLPLSHQHSGLQQTLRRGGVLRRRPSHLPLLLPDALGTGSAPACRHLG
Nucleotide Sequence CTGGTGGGCCTGCCACTTTCCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGTGGGGTGCTTCGGCGCCGGCCATCTCATCTGCCTCTACTGCTACCAGATGCCCTTGGCACAGGCTCTGCTCCCGCCTGCCGGCATCTGGGCTAG
CircID chr16:88738051|88738379
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence MPASGLGNGLPHSPFFLPPWSRPPGSSSPCGPTASGVVGCDGSSLDRVLGLKDFVGPTNCSSPHA
Nucleotide Sequence CTGCCGGCATCTGGGCTAGGTAACGGCTTGCCACACAGCCCCTTTTTCCTGCCACCCTGGTCCCGCCCACCTGGCTCGTCTAGCCCCTGTGGCCCCACTGCCTCTGGGGTGGTAGGCTGTGACGGGTCTTCTCTGGACAGGGTGCTGGGTCTCAAGGACTTCGTGGGTCCCACCAACTGCTCCAGCCCCCACGCG
CircID chr16:88738051|88738379
ORF Type ORF3
Protein Length 106
Nucleotide Length 318
Protein Sequence MEQLVGPTKSLRPSTLSREDPSQPTTPEAVGPQGLDEPGGRDQGGRKKGLCGKPLPSPDAGRREQSLCQGHLVAVEADEMAGAEAPHRDAESAEAPSADGKVAGPP
Nucleotide Sequence CTGGAGCAGTTGGTGGGACCCACGAAGTCCTTGAGACCCAGCACCCTGTCCAGAGAAGACCCGTCACAGCCTACCACCCCAGAGGCAGTGGGGCCACAGGGGCTAGACGAGCCAGGTGGGCGGGACCAGGGTGGCAGGAAAAAGGGGCTGTGTGGCAAGCCGTTACCTAGCCCAGATGCCGGCAGGCGGGAGCAGAGCCTGTGCCAAGGGCATCTGGTAGCAGTAGAGGCAGATGAGATGGCCGGCGCCGAAGCACCCCACCGCGACGCAGAGTCTGCTGAAGCCCCGAGTGCTGATGGGAAAGTGGCAGGCCCACCA
CircID chr16:88738051|88738379
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MRWPAPKHPTATQSLLKPRVLMGKWQAHQ
Nucleotide Sequence ATGAGATGGCCGGCGCCGAAGCACCCCACCGCGACGCAGAGTCTGCTGAAGCCCCGAGTGCTGATGGGAAAGTGGCAGGCCCACCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab