CircRNA Information

General Information
circRNA Basic Information
CircID chr16:88738314|88738665
Strand +
CircType exon
Host Gene ENSG00000103335.18;
Algorism CIRI2;
Sequence ACGGAGGTCACGGCTGGCCGCTCGTTTCCGAGTCACGGCCCACTGGCTGCTGGTGGCGGCTGGGCGGGTCCTGGCCGTAACACTGCTTGCACTGGCAGGTACGCACCGAGGCAGGGGGCACTGGCAGTCACACTGGGAGGGGTCTTGGGAGTTCCCTGATGACTGTGGAGACAGCGGGACACATGGCACTGGCCAGGTACCACCCTGTGTGCCCCTGCCCCGCAGGCATCGCCCACCCCTCGGCCCTCTCCAGTGTCTACCTGCTGCTCTTCCTGGCCCTCTGCACCTGGTGGGCCTGCCACTTTCCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGTGGGGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:88738314|88738665 hsa-miR-15a-5p 0 0 1
chr16:88738314|88738665 hsa-miR-15a-3p 0 0 1
chr16:88738314|88738665 hsa-miR-148a-5p 0 0 1
chr16:88738314|88738665 hsa-miR-148a-3p 0 0 1
chr16:88738314|88738665 hsa-miR-214-5p 0 0 1
chr16:88738314|88738665 hsa-miR-214-3p 0 0 1
chr16:88738314|88738665 hsa-miR-15b-5p 0 0 1
chr16:88738314|88738665 hsa-miR-15b-3p 0 0 1
chr16:88738314|88738665 hsa-miR-130a-5p 0 0 1
chr16:88738314|88738665 hsa-miR-130a-3p 0 0 1
chr16:88738314|88738665 hsa-miR-152-5p 0 0 1
chr16:88738314|88738665 hsa-miR-152-3p 0 0 1
chr16:88738314|88738665 hsa-miR-134-5p 0 0 1
chr16:88738314|88738665 hsa-miR-134-3p 0 0 1
chr16:88738314|88738665 hsa-miR-150-5p 0 0 1
chr16:88738314|88738665 hsa-miR-150-3p 0 0 1
chr16:88738314|88738665 hsa-miR-185-5p 0 0 1
chr16:88738314|88738665 hsa-miR-185-3p 0 0 1
chr16:88738314|88738665 hsa-miR-195-5p 0 0 1
chr16:88738314|88738665 hsa-miR-195-3p 0 0 1
chr16:88738314|88738665 hsa-miR-301a-5p 0 0 1
chr16:88738314|88738665 hsa-miR-301a-3p 0 0 1
chr16:88738314|88738665 hsa-miR-130b-5p 0 0 1
chr16:88738314|88738665 hsa-miR-130b-3p 0 0 1
chr16:88738314|88738665 hsa-miR-379-5p 0 0 1
chr16:88738314|88738665 hsa-miR-379-3p 0 0 1
chr16:88738314|88738665 hsa-miR-148b-5p 0 0 1
chr16:88738314|88738665 hsa-miR-148b-3p 0 0 1
chr16:88738314|88738665 hsa-miR-424-5p 0 0 1
chr16:88738314|88738665 hsa-miR-424-3p 0 0 1
chr16:88738314|88738665 hsa-miR-497-5p 0 0 1
chr16:88738314|88738665 hsa-miR-497-3p 0 0 1
chr16:88738314|88738665 hsa-miR-575 0 0 1
chr16:88738314|88738665 hsa-miR-608 1 0 1
chr16:88738314|88738665 hsa-miR-619-5p 0 0 1
chr16:88738314|88738665 hsa-miR-619-3p 0 0 1
chr16:88738314|88738665 hsa-miR-626 0 0 1
chr16:88738314|88738665 hsa-miR-634 0 0 1
chr16:88738314|88738665 hsa-miR-454-5p 0 0 1
chr16:88738314|88738665 hsa-miR-454-3p 0 0 1
chr16:88738314|88738665 hsa-miR-541-5p 0 0 1
chr16:88738314|88738665 hsa-miR-541-3p 0 0 1
chr16:88738314|88738665 hsa-miR-744-5p 0 0 1
chr16:88738314|88738665 hsa-miR-744-3p 0 0 1
chr16:88738314|88738665 hsa-miR-301b-5p 0 0 1
chr16:88738314|88738665 hsa-miR-301b-3p 0 0 1
chr16:88738314|88738665 hsa-miR-1226-5p 0 0 1
chr16:88738314|88738665 hsa-miR-1226-3p 0 0 1
chr16:88738314|88738665 hsa-miR-1293 0 0 1
chr16:88738314|88738665 hsa-miR-1250-5p 0 0 1
chr16:88738314|88738665 hsa-miR-1250-3p 0 0 1
chr16:88738314|88738665 hsa-miR-1263 0 0 1
chr16:88738314|88738665 hsa-miR-1825 0 0 1
chr16:88738314|88738665 hsa-miR-512-3p 0 0 1
chr16:88738314|88738665 hsa-miR-486-3p 0 0 1
chr16:88738314|88738665 hsa-miR-199a-5p 0 0 1
chr16:88738314|88738665 hsa-miR-654-5p 0 0 1
chr16:88738314|88738665 hsa-miR-199b-5p 0 0 1
chr16:88738314|88738665 hsa-miR-1207-5p 1 0 1
chr16:88738314|88738665 hsa-miR-1280 0 0 1
chr16:88738314|88738665 hsa-miR-16 0 0 1
chr16:88738314|88738665 hsa-miR-220c 0 0 1
chr16:88738314|88738665 hsa-miR-602 1 0 0
chr16:88738314|88738665 hsa-miR-658 1 0 0
chr16:88738314|88738665 hsa-miR-762 1 0 0
chr16:88738314|88738665 hsa-miR-760 1 0 0
chr16:88738314|88738665 hsa-miR-1470 1 0 0
chr16:88738314|88738665 hsa-miR-1471 1 0 0
chr16:88738314|88738665 hsa-miR-2861 1 0 0
chr16:88738314|88738665 hsa-miR-3153 1 0 0
chr16:88738314|88738665 hsa-miR-4270 1 0 0
chr16:88738314|88738665 hsa-miR-3665 1 0 0
chr16:88738314|88738665 hsa-miR-3135b 1 0 0
chr16:88738314|88738665 hsa-miR-4481 1 0 0
chr16:88738314|88738665 hsa-miR-4651 1 0 0
chr16:88738314|88738665 hsa-miR-4656 1 0 0
chr16:88738314|88738665 hsa-miR-4688 1 0 0
chr16:88738314|88738665 hsa-miR-4706 1 0 0
chr16:88738314|88738665 hsa-miR-4710 1 0 0
chr16:88738314|88738665 hsa-miR-4721 1 0 0
chr16:88738314|88738665 hsa-miR-6081 1 0 0
chr16:88738314|88738665 hsa-miR-6125 1 0 0
chr16:88738314|88738665 hsa-miR-6165 1 0 0
chr16:88738314|88738665 hsa-miR-6860 1 0 0
chr16:88738314|88738665 hsa-miR-8089 1 0 0
chr16:88738314|88738665 hsa-miR-6749-3p 1 0 0
chr16:88738314|88738665 hsa-miR-4731-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6892-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6510-5p 1 0 0
chr16:88738314|88738665 hsa-miR-8071 1 0 0
chr16:88738314|88738665 hsa-miR-1227-5p 1 0 0
chr16:88738314|88738665 hsa-miR-1225-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6873-5p 1 0 0
chr16:88738314|88738665 hsa-miR-7160-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6806-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4655-5p 1 0 0
chr16:88738314|88738665 hsa-miR-197-5p 1 0 0
chr16:88738314|88738665 hsa-miR-7845-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4697-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6805-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6798-5p 1 0 0
chr16:88738314|88738665 hsa-miR-2467-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6782-5p 1 0 0
chr16:88738314|88738665 hsa-miR-5008-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4713-5p 1 0 0
chr16:88738314|88738665 hsa-miR-1229-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4783-3p 1 0 0
chr16:88738314|88738665 hsa-miR-4640-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6753-5p 1 0 0
chr16:88738314|88738665 hsa-miR-1228-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6771-5p 1 0 0
chr16:88738314|88738665 hsa-miR-3648 1 0 0
chr16:88738314|88738665 hsa-miR-149-3p 1 0 0
chr16:88738314|88738665 hsa-miR-3616-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6781-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6877-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6895-5p 1 0 0
chr16:88738314|88738665 hsa-miR-423-5p 1 0 0
chr16:88738314|88738665 hsa-miR-3944-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4758-3p 1 0 0
chr16:88738314|88738665 hsa-miR-4749-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6846-3p 1 0 0
chr16:88738314|88738665 hsa-miR-16-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4763-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6816-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6775-5p 1 0 0
chr16:88738314|88738665 hsa-miR-1343-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6743-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6752-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6756-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6803-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6851-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6722-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6751-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6763-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6779-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6879-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4728-5p 1 0 0
chr16:88738314|88738665 hsa-miR-5196-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6780b-5p 1 0 0
chr16:88738314|88738665 hsa-miR-1909-3p 1 0 0
chr16:88738314|88738665 hsa-miR-328-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4632-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4649-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4726-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6729-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6735-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6738-5p 1 0 0
chr16:88738314|88738665 hsa-miR-675-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6794-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6858-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6883-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6845-5p 1 0 0
chr16:88738314|88738665 hsa-miR-10396a-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6731-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6758-5p 1 0 0
chr16:88738314|88738665 hsa-miR-1271-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6785-5p 1 0 0
chr16:88738314|88738665 hsa-miR-6762-5p 1 0 0
chr16:88738314|88738665 hsa-miR-4722-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6893-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6756-3p 1 0 0
chr16:88738314|88738665 hsa-miR-3085-3p 1 0 0
chr16:88738314|88738665 hsa-miR-6820-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:88738314|88738665
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MAAGGGWAGPGRNTACTGRYAPRQGALAVTLGGVLGVP
Nucleotide Sequence CTGGCTGCTGGTGGCGGCTGGGCGGGTCCTGGCCGTAACACTGCTTGCACTGGCAGGTACGCACCGAGGCAGGGGGCACTGGCAGTCACACTGGGAGGGGTCTTGGGAGTTCCCTGA
CircID chr16:88738314|88738665
ORF Type ORF2
Protein Length 63
Nucleotide Length 189
Protein Sequence MWRQRDTWHWPGTTLCAPAPQASPTPRPSPVSTCCSSWPSAPGGPATFPSALGASADSASRWG
Nucleotide Sequence CTGTGGAGACAGCGGGACACATGGCACTGGCCAGGTACCACCCTGTGTGCCCCTGCCCCGCAGGCATCGCCCACCCCTCGGCCCTCTCCAGTGTCTACCTGCTGCTCTTCCTGGCCCTCTGCACCTGGTGGGCCTGCCACTTTCCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGTGGGGT
CircID chr16:88738314|88738665
ORF Type ORF3
Protein Length 113
Nucleotide Length 339
Protein Sequence MAARFRVTAHWLLVAAGRVLAVTLLALAGTHRGRGHWQSHWEGSWEFPDDCGDSGTHGTGQVPPCVPLPRRHRPPLGPLQCLPAALPGPLHLVGLPLSHQHSGLQQTLRRGGV
Nucleotide Sequence CTGGCCGCTCGTTTCCGAGTCACGGCCCACTGGCTGCTGGTGGCGGCTGGGCGGGTCCTGGCCGTAACACTGCTTGCACTGGCAGGTACGCACCGAGGCAGGGGGCACTGGCAGTCACACTGGGAGGGGTCTTGGGAGTTCCCTGATGACTGTGGAGACAGCGGGACACATGGCACTGGCCAGGTACCACCCTGTGTGCCCCTGCCCCGCAGGCATCGCCCACCCCTCGGCCCTCTCCAGTGTCTACCTGCTGCTCTTCCTGGCCCTCTGCACCTGGTGGGCCTGCCACTTTCCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGTGGGGTG
CircID chr16:88738314|88738665
ORF Type ORF4
Protein Length 88
Nucleotide Length 264
Protein Sequence MHWQVRTEAGGTGSHTGRGLGSSLMTVETAGHMALARYHPVCPCPAGIAHPSALSSVYLLLFLALCTWWACHFPISTRGFSRLCVAVG
Nucleotide Sequence TTGCACTGGCAGGTACGCACCGAGGCAGGGGGCACTGGCAGTCACACTGGGAGGGGTCTTGGGAGTTCCCTGATGACTGTGGAGACAGCGGGACACATGGCACTGGCCAGGTACCACCCTGTGTGCCCCTGCCCCGCAGGCATCGCCCACCCCTCGGCCCTCTCCAGTGTCTACCTGCTGCTCTTCCTGGCCCTCTGCACCTGGTGGGCCTGCCACTTTCCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGTGGGG
CircID chr16:88738314|88738665
ORF Type ORF5
Protein Length 41
Nucleotide Length 126
Protein Sequence MERAEGWAMPAGQGHTGWYLASAMCPAVSTVIRELPRPLPV
Nucleotide Sequence CTGGAGAGGGCCGAGGGGTGGGCGATGCCTGCGGGGCAGGGGCACACAGGGTGGTACCTGGCCAGTGCCATGTGTCCCGCTGTCTCCACAGTCATCAGGGAACTCCCAAGACCCCTCCCAGTGTGA
CircID chr16:88738314|88738665
ORF Type ORF6
Protein Length 39
Nucleotide Length 120
Protein Sequence MPVPPASVRTCQCKQCYGQDPPSRHQQPVGRDSETSGQP
Nucleotide Sequence CTGCCAGTGCCCCCTGCCTCGGTGCGTACCTGCCAGTGCAAGCAGTGTTACGGCCAGGACCCGCCCAGCCGCCACCAGCAGCCAGTGGGCCGTGACTCGGAAACGAGCGGCCAGCCGTGA
CircID chr16:88738314|88738665
ORF Type ORF7
Protein Length 75
Nucleotide Length 225
Protein Sequence MRGRGTQGGTWPVPCVPLSPQSSGNSQDPSQCDCQCPLPRCVPASASSVTARTRPAATSSQWAVTRKRAASRDLR
Nucleotide Sequence CTGCGGGGCAGGGGCACACAGGGTGGTACCTGGCCAGTGCCATGTGTCCCGCTGTCTCCACAGTCATCAGGGAACTCCCAAGACCCCTCCCAGTGTGACTGCCAGTGCCCCCTGCCTCGGTGCGTACCTGCCAGTGCAAGCAGTGTTACGGCCAGGACCCGCCCAGCCGCCACCAGCAGCCAGTGGGCCGTGACTCGGAAACGAGCGGCCAGCCGTGACCTCCGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab