CircNet

General Information

circRNA Basic Information

CircID	chr16:88822589\|88842829
Strand	-
CircType	exon
Host Gene	ENSG00000141012.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATGGGATGGGGTGACCTCGGGGTGTATGGAGAGCCCTCCAGAGAGACCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCACCAACGCCCATGCCAGAAACGGGCATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAGGTTCCCCCTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:88822589\|88842829	hsa-miR-7-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:88822589\|88842829
ORF Type	ORF1
Protein Length	98
Nucleotide Length	294
Protein Sequence	MESPPERPRIWTGWLQKGCFSQTSILPTLCARHRGRHCSQDGYPSAMASTPPTPMPETGIDFCPGQNVSGVTTHNLEDHTKLPLIFHLGRDPGERFPL
Nucleotide Sequence	ATGGAGAGCCCTCCAGAGAGACCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCACCAACGCCCATGCCAGAAACGGGCATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGATCTTCCACCTGGGACGGGACCCAGGGGAGAGGTTCCCCCTC

CircID	chr16:88822589\|88842829
ORF Type	ORF2
Protein Length	69
Nucleotide Length	207
Protein Sequence	MGWGDLGVYGEPSRETPNLDRMAAEGLLFPNFYSANPLCSPSRAALLTGRLPIRNGFYTTNAHARNGH*
Nucleotide Sequence	ATGGGATGGGGTGACCTCGGGGTGTATGGAGAGCCCTCCAGAGAGACCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCCCAAACTTCTATTCTGCCAACCCTCTGTGCTCGCCATCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCACCAACGCCCATGCCAGAAACGGGCATTGA

CircID	chr16:88822589\|88842829
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MASTEGWQNRSLGKAALLQPSGPNSGSLWRALHTPRGHPIP
Nucleotide Sequence	ATGGCGAGCACAGAGGGTTGGCAGAATAGAAGTTTGGGAAAAGCAGCCCTTCTGCAGCCATCCGGTCCAAATTCGGGGTCTCTCTGGAGGGCTCTCCATACACCCCGAGGTCACCCCATCCCA

CircID	chr16:88822589\|88842829
ORF Type	ORF4
Protein Length	55
Nucleotide Length	165
Protein Sequence	VLAIEGGTAHRTATHPQWLLHHQRPCQKRALISALGRTFQGSQLTIWKTTRSCP*
Nucleotide Sequence	GTGCTCGCCATCGAGGGCGGCACTGCTCACAGGACGGCTACCCATCCGCAATGGCTTCTACACCACCAACGCCCATGCCAGAAACGGGCATTGATTTCTGCCCTGGGCAGAACGTTTCAGGGGTCACAACTCACAATCTGGAAGACCACACGAAGCTGCCCCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr16:88822589\|88842829	AGGF1	2	0	0
chr16:88822589\|88842829	NOP56	2	0	1
chr16:88822589\|88842829	FUS	2	3	0
chr16:88822589\|88842829	ZRANB2	1	10	1
chr16:88822589\|88842829	SF3B4	3	0	1
chr16:88822589\|88842829	HNRNPUL1	1	0	0
chr16:88822589\|88842829	METAP2	1	0	0
chr16:88822589\|88842829	KHDRBS1	1	0	0
chr16:88822589\|88842829	AARS	3	0	0
chr16:88822589\|88842829	PRPF8	0	1	0
chr16:88822589\|88842829	TAF15	0	2	0
chr16:88822589\|88842829	DHX30	2	0	0
chr16:88822589\|88842829	LARP4	1	0	0
chr16:88822589\|88842829	GEMIN5	1	0	0
chr16:88822589\|88842829	DGCR8	1	1	0
chr16:88822589\|88842829	SRSF7	0	0	1
chr16:88822589\|88842829	DROSHA	2	8	0
chr16:88822589\|88842829	SRSF1	2	0	1
chr16:88822589\|88842829	NOP58	2	1	0
chr16:88822589\|88842829	RBM27	4	0	0
chr16:88822589\|88842829	U2AF1	0	0	2
chr16:88822589\|88842829	U2AF2	6	0	5
chr16:88822589\|88842829	DDX54	3	0	6
chr16:88822589\|88842829	LSM11	2	0	0
chr16:88822589\|88842829	AKAP8L	5	0	0
chr16:88822589\|88842829	HNRNPK	1	11	2
chr16:88822589\|88842829	HNRNPA2B1	1	0	0
chr16:88822589\|88842829	AUH	1	0	0
chr16:88822589\|88842829	HNRNPC	0	1	0
chr16:88822589\|88842829	TRA2A	1	0	0
chr16:88822589\|88842829	FAM120A	2	0	0
chr16:88822589\|88842829	DDX3X	0	0	1
chr16:88822589\|88842829	SMNDC1	7	0	1
chr16:88822589\|88842829	TBRG4	1	0	0
chr16:88822589\|88842829	MSI1	1	0	0
chr16:88822589\|88842829	RBM10	1	0	0
chr16:88822589\|88842829	LIN28B	0	0	1
chr16:88822589\|88842829	MTPAP	1	1	0
chr16:88822589\|88842829	SND1	0	1	1
chr16:88822589\|88842829	UCHL5	1	1	0
chr16:88822589\|88842829	FASTKD2	1	0	0
chr16:88822589\|88842829	IGF2BP2	2	0	2
chr16:88822589\|88842829	FTO	1	0	0
chr16:88822589\|88842829	TARDBP	1	2	0
chr16:88822589\|88842829	GTF2F1	4	10	1
chr16:88822589\|88842829	RBFOX2	2	1	0
chr16:88822589\|88842829	SLTM	3	4	0
chr16:88822589\|88842829	DDX42	1	0	0
chr16:88822589\|88842829	CSTF2T	2	19	2
chr16:88822589\|88842829	TIA1	1	0	0
chr16:88822589\|88842829	NONO	8	0	0
chr16:88822589\|88842829	EIF4A3	5	3	6
chr16:88822589\|88842829	DKC1	1	0	0
chr16:88822589\|88842829	YWHAG	0	1	0
chr16:88822589\|88842829	EWSR1	10	0	1
chr16:88822589\|88842829	ILF3	1	15	2
chr16:88822589\|88842829	FBL	3	3	1

CircRNA Information