CircRNA Information

General Information
circRNA Basic Information
CircID chr16:89198652|89198912
Strand -
CircType exon
Host Gene ENSG00000259803.5;
Algorism CIRI2;
Sequence CTGTAGCCAGGGAGTTCTCCTCCAAGGAACTGTCCCCGGGGCCCACGCCACTGGCTTCTGCAAAGCGCCACAGGATCTTCCTGGCTCGAGCTACCTGACCTGTGGCCAGCAGCCAGCAGGGAGACTCGGGGAACAGGGCCGGGAACCTGCAGCGTTGGTGAGGATGCCCACGGCTCCCTCCACCTCCTCCTGGAAGGAGAGGCAAAGGCCAGGGCCCCCACCCCACCCCCAGGCTCAGGGGCAGGACATCACTGTAGTTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:89198652|89198912 hsa-miR-146a-5p 0 0 1
chr16:89198652|89198912 hsa-miR-146a-3p 0 0 1
chr16:89198652|89198912 hsa-miR-370-5p 0 0 1
chr16:89198652|89198912 hsa-miR-370-3p 0 0 1
chr16:89198652|89198912 hsa-miR-432-5p 0 0 1
chr16:89198652|89198912 hsa-miR-432-3p 0 0 1
chr16:89198652|89198912 hsa-miR-575 0 0 1
chr16:89198652|89198912 hsa-miR-588 0 1 1
chr16:89198652|89198912 hsa-miR-604 0 0 1
chr16:89198652|89198912 hsa-miR-608 0 1 1
chr16:89198652|89198912 hsa-miR-637 0 1 1
chr16:89198652|89198912 hsa-miR-647 0 0 1
chr16:89198652|89198912 hsa-miR-661 1 0 1
chr16:89198652|89198912 hsa-miR-657 0 1 1
chr16:89198652|89198912 hsa-miR-765 0 1 1
chr16:89198652|89198912 hsa-miR-298 0 1 1
chr16:89198652|89198912 hsa-miR-665 0 1 1
chr16:89198652|89198912 hsa-miR-1205 0 1 1
chr16:89198652|89198912 hsa-miR-1291 0 1 1
chr16:89198652|89198912 hsa-miR-139-5p 0 1 1
chr16:89198652|89198912 hsa-miR-296-5p 0 0 1
chr16:89198652|89198912 hsa-miR-146b-3p 0 0 1
chr16:89198652|89198912 hsa-miR-502-5p 0 0 1
chr16:89198652|89198912 hsa-miR-324-3p 0 0 1
chr16:89198652|89198912 hsa-miR-342-5p 0 0 1
chr16:89198652|89198912 hsa-miR-125a-5p 0 0 1
chr16:89198652|89198912 hsa-miR-146b-5p 0 0 1
chr16:89198652|89198912 hsa-miR-125b 0 0 1
chr16:89198652|89198912 hsa-miR-1274b 0 0 1
chr16:89198652|89198912 hsa-miR-768-5p 0 0 1
chr16:89198652|89198912 hsa-miR-346 1 0 0
chr16:89198652|89198912 hsa-miR-762 1 0 0
chr16:89198652|89198912 hsa-miR-1268a 1 0 0
chr16:89198652|89198912 hsa-miR-1538 1 0 0
chr16:89198652|89198912 hsa-miR-2861 1 1 0
chr16:89198652|89198912 hsa-miR-4298 1 0 0
chr16:89198652|89198912 hsa-miR-4322 1 0 0
chr16:89198652|89198912 hsa-miR-4281 1 0 0
chr16:89198652|89198912 hsa-miR-4292 1 0 0
chr16:89198652|89198912 hsa-miR-1268b 1 0 0
chr16:89198652|89198912 hsa-miR-4447 0 1 0
chr16:89198652|89198912 hsa-miR-4466 1 0 0
chr16:89198652|89198912 hsa-miR-4510 0 1 0
chr16:89198652|89198912 hsa-miR-4651 1 1 0
chr16:89198652|89198912 hsa-miR-4706 1 0 0
chr16:89198652|89198912 hsa-miR-4721 1 0 0
chr16:89198652|89198912 hsa-miR-4739 1 0 0
chr16:89198652|89198912 hsa-miR-4780 1 0 0
chr16:89198652|89198912 hsa-miR-5572 1 0 0
chr16:89198652|89198912 hsa-miR-6072 0 1 0
chr16:89198652|89198912 hsa-miR-6127 0 1 0
chr16:89198652|89198912 hsa-miR-6129 0 1 0
chr16:89198652|89198912 hsa-miR-8089 1 1 0
chr16:89198652|89198912 hsa-miR-12114 0 1 0
chr16:89198652|89198912 hsa-miR-6749-3p 1 0 0
chr16:89198652|89198912 hsa-miR-92a-2-5p 0 1 0
chr16:89198652|89198912 hsa-miR-3692-5p 0 1 0
chr16:89198652|89198912 hsa-miR-6515-5p 0 1 0
chr16:89198652|89198912 hsa-miR-6880-5p 0 1 0
chr16:89198652|89198912 hsa-miR-3064-5p 0 1 0
chr16:89198652|89198912 hsa-miR-6762-3p 0 1 0
chr16:89198652|89198912 hsa-miR-874-3p 1 0 0
chr16:89198652|89198912 hsa-miR-6742-5p 1 1 0
chr16:89198652|89198912 hsa-miR-6796-5p 1 1 0
chr16:89198652|89198912 hsa-miR-6732-5p 1 0 0
chr16:89198652|89198912 hsa-miR-6827-5p 0 1 0
chr16:89198652|89198912 hsa-miR-6782-5p 1 0 0
chr16:89198652|89198912 hsa-miR-3150b-3p 0 1 0
chr16:89198652|89198912 hsa-miR-6786-5p 1 0 0
chr16:89198652|89198912 hsa-miR-4786-3p 0 1 0
chr16:89198652|89198912 hsa-miR-4640-5p 0 1 0
chr16:89198652|89198912 hsa-miR-5580-5p 0 1 0
chr16:89198652|89198912 hsa-miR-7113-3p 0 1 0
chr16:89198652|89198912 hsa-miR-3677-3p 1 1 0
chr16:89198652|89198912 hsa-miR-6749-5p 1 0 0
chr16:89198652|89198912 hsa-miR-3648 1 0 0
chr16:89198652|89198912 hsa-miR-4787-5p 1 0 0
chr16:89198652|89198912 hsa-miR-7160-3p 1 1 0
chr16:89198652|89198912 hsa-miR-1226-3p 0 1 0
chr16:89198652|89198912 hsa-miR-1251-3p 0 1 0
chr16:89198652|89198912 hsa-miR-6759-3p 1 0 0
chr16:89198652|89198912 hsa-miR-219b-5p 0 1 0
chr16:89198652|89198912 hsa-miR-6838-3p 1 0 0
chr16:89198652|89198912 hsa-miR-6769b-5p 1 0 0
chr16:89198652|89198912 hsa-miR-6787-5p 1 0 0
chr16:89198652|89198912 hsa-miR-6816-5p 1 0 0
chr16:89198652|89198912 hsa-miR-6870-5p 0 1 0
chr16:89198652|89198912 hsa-miR-6726-5p 1 0 0
chr16:89198652|89198912 hsa-miR-6737-5p 1 1 0
chr16:89198652|89198912 hsa-miR-6752-5p 1 1 0
chr16:89198652|89198912 hsa-miR-6756-5p 1 1 0
chr16:89198652|89198912 hsa-miR-6769a-5p 1 0 0
chr16:89198652|89198912 hsa-miR-6803-5p 1 1 0
chr16:89198652|89198912 hsa-miR-6819-5p 1 1 0
chr16:89198652|89198912 hsa-miR-6851-5p 0 1 0
chr16:89198652|89198912 hsa-miR-7107-5p 1 0 0
chr16:89198652|89198912 hsa-miR-7110-5p 0 1 0
chr16:89198652|89198912 hsa-miR-11181-3p 0 1 0
chr16:89198652|89198912 hsa-miR-1249-5p 0 1 0
chr16:89198652|89198912 hsa-miR-6751-5p 1 1 0
chr16:89198652|89198912 hsa-miR-328-5p 1 0 0
chr16:89198652|89198912 hsa-miR-4749-5p 1 0 0
chr16:89198652|89198912 hsa-miR-1199-5p 0 1 0
chr16:89198652|89198912 hsa-miR-6773-5p 0 1 0
chr16:89198652|89198912 hsa-miR-4472 0 1 0
chr16:89198652|89198912 hsa-miR-4667-5p 1 0 0
chr16:89198652|89198912 hsa-miR-6724-5p 1 1 0
chr16:89198652|89198912 hsa-miR-6791-5p 1 0 0
chr16:89198652|89198912 hsa-miR-6511a-3p 0 1 0
chr16:89198652|89198912 hsa-miR-10401-3p 1 0 0
chr16:89198652|89198912 hsa-miR-6775-3p 0 1 0
chr16:89198652|89198912 hsa-miR-6511b-3p 0 1 0
chr16:89198652|89198912 hsa-miR-3085-3p 0 1 0
chr16:89198652|89198912 hsa-miR-5581-5p 0 1 0
chr16:89198652|89198912 hsa-miR-10394-5p 0 1 0
chr16:89198652|89198912 hsa-miR-4676-5p 0 1 0
chr16:89198652|89198912 hsa-miR-3922-3p 0 1 0
chr16:89198652|89198912 hsa-miR-3121-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr16:89198652|89198912
ORF Type ORF1
Protein Length 68
Nucleotide Length 204
Protein Sequence MQSATGSSWLELPDLWPAASRETRGTGPGTCSVGEDAHGSLHLLLEGEAKARAPTPPPGSGAGHHCSS
Nucleotide Sequence CTGCAAAGCGCCACAGGATCTTCCTGGCTCGAGCTACCTGACCTGTGGCCAGCAGCCAGCAGGGAGACTCGGGGAACAGGGCCGGGAACCTGCAGCGTTGGTGAGGATGCCCACGGCTCCCTCCACCTCCTCCTGGAAGGAGAGGCAAAGGCCAGGGCCCCCACCCCACCCCCAGGCTCAGGGGCAGGACATCACTGTAGTTCT
CircID chr16:89198652|89198912
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MTCGQQPAGRLGEQGREPAALVRMPTAPSTSSWKERQRPGPPPHPQAQGQDITVV
Nucleotide Sequence CTGACCTGTGGCCAGCAGCCAGCAGGGAGACTCGGGGAACAGGGCCGGGAACCTGCAGCGTTGGTGAGGATGCCCACGGCTCCCTCCACCTCCTCCTGGAAGGAGAGGCAAAGGCCAGGGCCCCCACCCCACCCCCAGGCTCAGGGGCAGGACATCACTGTAGTT
CircID chr16:89198652|89198912
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MAFASPSRRRWREPWASSPTLQVPGPVPRVSLLAAGHRSGSSSQEDPVALCRSQWRGPRGQFLGGELPGY
Nucleotide Sequence CTGGCCTTTGCCTCTCCTTCCAGGAGGAGGTGGAGGGAGCCGTGGGCATCCTCACCAACGCTGCAGGTTCCCGGCCCTGTTCCCCGAGTCTCCCTGCTGGCTGCTGGCCACAGGTCAGGTAGCTCGAGCCAGGAAGATCCTGTGGCGCTTTGCAGAAGCCAGTGGCGTGGGCCCCGGGGACAGTTCCTTGGAGGAGAACTCCCTGGCTAC
CircID chr16:89198652|89198912
ORF Type ORF4
Protein Length 81
Nucleotide Length 243
Protein Sequence MPLSLGVGWGPWPLPLLPGGGGGSRGHPHQRCRFPALFPESPCWLLATGQVARARKILWRFAEASGVGPGDSSLEENSLAT
Nucleotide Sequence CTGCCCCTGAGCCTGGGGGTGGGGTGGGGGCCCTGGCCTTTGCCTCTCCTTCCAGGAGGAGGTGGAGGGAGCCGTGGGCATCCTCACCAACGCTGCAGGTTCCCGGCCCTGTTCCCCGAGTCTCCCTGCTGGCTGCTGGCCACAGGTCAGGTAGCTCGAGCCAGGAAGATCCTGTGGCGCTTTGCAGAAGCCAGTGGCGTGGGCCCCGGGGACAGTTCCTTGGAGGAGAACTCCCTGGCTACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab