CircRNA Information

General Information
circRNA Basic Information
CircID chr16:89637834|89638195
Strand -
CircType exon
Host Gene ENSG00000015413.8;
Algorism CIRI2;
Sequence AGGGTCCCTGAGGGGCTGGAGGACGTCTCCAAGTATCCAGACCTGATCGCTGAGCTGCTCAGGAGGAACTGGACGGAGGCGGAGGTCAAGGGCGCACTGGCTGACAACCTGCTGAGGGTCTTCGAGGCTGTGGAACAGGTGAGGATGGGGTGGCCACCTGAGTCTCCCCCACCACCACCAGCAGGCAGGCTGCCCCACCCGTGTCTGTCTGTCCCCAGGCCAGCAACCTCACACAGGCTCCCGAGGAGGAGCCCATCCCGCTGGACCAGCTGGGTGGCTCCTGCAGGACCCATTACGGCTACTCCTCTGGGGCTTCCAGCCTCCATCGCCACTGGGGGCTCCTGCTGGCCTCCCTCGCTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:89637834|89638195 hsa-miR-192-5p 0 0 1
chr16:89637834|89638195 hsa-miR-192-3p 0 0 1
chr16:89637834|89638195 hsa-miR-214-5p 0 0 1
chr16:89637834|89638195 hsa-miR-214-3p 0 0 1
chr16:89637834|89638195 hsa-miR-215-5p 0 0 1
chr16:89637834|89638195 hsa-miR-215-3p 0 0 1
chr16:89637834|89638195 hsa-miR-370-5p 0 0 1
chr16:89637834|89638195 hsa-miR-370-3p 0 0 1
chr16:89637834|89638195 hsa-miR-432-5p 0 0 1
chr16:89637834|89638195 hsa-miR-432-3p 0 0 1
chr16:89637834|89638195 hsa-miR-510-5p 0 0 1
chr16:89637834|89638195 hsa-miR-510-3p 0 0 1
chr16:89637834|89638195 hsa-miR-575 0 0 1
chr16:89637834|89638195 hsa-miR-588 0 0 1
chr16:89637834|89638195 hsa-miR-596 0 0 1
chr16:89637834|89638195 hsa-miR-602 0 1 1
chr16:89637834|89638195 hsa-miR-620 0 0 1
chr16:89637834|89638195 hsa-miR-625-5p 0 0 1
chr16:89637834|89638195 hsa-miR-625-3p 0 0 1
chr16:89637834|89638195 hsa-miR-646 0 0 1
chr16:89637834|89638195 hsa-miR-650 0 0 1
chr16:89637834|89638195 hsa-miR-661 1 0 1
chr16:89637834|89638195 hsa-miR-657 0 1 1
chr16:89637834|89638195 hsa-miR-766-5p 0 0 1
chr16:89637834|89638195 hsa-miR-766-3p 0 0 1
chr16:89637834|89638195 hsa-miR-890 0 1 1
chr16:89637834|89638195 hsa-miR-541-5p 0 0 1
chr16:89637834|89638195 hsa-miR-541-3p 0 0 1
chr16:89637834|89638195 hsa-miR-922 0 0 1
chr16:89637834|89638195 hsa-miR-1200 0 1 1
chr16:89637834|89638195 hsa-miR-1205 0 1 1
chr16:89637834|89638195 hsa-miR-1286 0 0 1
chr16:89637834|89638195 hsa-miR-1294 0 1 1
chr16:89637834|89638195 hsa-miR-1249-5p 0 0 1
chr16:89637834|89638195 hsa-miR-1249-3p 0 0 1
chr16:89637834|89638195 hsa-miR-1266-5p 0 0 1
chr16:89637834|89638195 hsa-miR-1266-3p 0 0 1
chr16:89637834|89638195 hsa-miR-1270 0 0 1
chr16:89637834|89638195 hsa-miR-1275 0 1 1
chr16:89637834|89638195 hsa-miR-1281 0 0 1
chr16:89637834|89638195 hsa-miR-1321 0 0 1
chr16:89637834|89638195 hsa-miR-1324 0 0 1
chr16:89637834|89638195 hsa-miR-1825 0 1 1
chr16:89637834|89638195 hsa-miR-671-5p 1 1 1
chr16:89637834|89638195 hsa-miR-125a-3p 0 0 1
chr16:89637834|89638195 hsa-miR-1225-3p 1 1 1
chr16:89637834|89638195 hsa-miR-145-5p 0 1 1
chr16:89637834|89638195 hsa-miR-486-3p 0 0 1
chr16:89637834|89638195 hsa-miR-485-5p 1 0 1
chr16:89637834|89638195 hsa-miR-654-5p 0 0 1
chr16:89637834|89638195 hsa-miR-361-3p 0 1 1
chr16:89637834|89638195 hsa-miR-1207-3p 0 0 1
chr16:89637834|89638195 hsa-miR-876-3p 0 0 1
chr16:89637834|89638195 hsa-miR-323-5p 0 0 1
chr16:89637834|89638195 hsa-miR-138 0 0 1
chr16:89637834|89638195 hsa-miR-453 0 0 1
chr16:89637834|89638195 hsa-miR-608 1 0 0
chr16:89637834|89638195 hsa-miR-637 1 0 0
chr16:89637834|89638195 hsa-miR-762 1 0 0
chr16:89637834|89638195 hsa-miR-1202 1 0 0
chr16:89637834|89638195 hsa-miR-3176 0 1 0
chr16:89637834|89638195 hsa-miR-4268 0 1 0
chr16:89637834|89638195 hsa-miR-3652 0 1 0
chr16:89637834|89638195 hsa-miR-3943 1 1 0
chr16:89637834|89638195 hsa-miR-4462 1 1 0
chr16:89637834|89638195 hsa-miR-4464 0 1 0
chr16:89637834|89638195 hsa-miR-4530 0 1 0
chr16:89637834|89638195 hsa-miR-4534 0 1 0
chr16:89637834|89638195 hsa-miR-4739 1 1 0
chr16:89637834|89638195 hsa-miR-5090 1 0 0
chr16:89637834|89638195 hsa-miR-5787 1 0 0
chr16:89637834|89638195 hsa-miR-6079 0 1 0
chr16:89637834|89638195 hsa-miR-6090 1 1 0
chr16:89637834|89638195 hsa-miR-6127 0 1 0
chr16:89637834|89638195 hsa-miR-6131 0 1 0
chr16:89637834|89638195 hsa-miR-8082 0 1 0
chr16:89637834|89638195 hsa-miR-8089 1 1 0
chr16:89637834|89638195 hsa-miR-9986 0 1 0
chr16:89637834|89638195 hsa-miR-11399 0 1 0
chr16:89637834|89638195 hsa-miR-12131 0 1 0
chr16:89637834|89638195 hsa-miR-138-5p 1 1 0
chr16:89637834|89638195 hsa-miR-92a-2-5p 0 1 0
chr16:89637834|89638195 hsa-miR-6879-3p 0 1 0
chr16:89637834|89638195 hsa-miR-6894-5p 1 0 0
chr16:89637834|89638195 hsa-miR-4687-3p 1 0 0
chr16:89637834|89638195 hsa-miR-6720-5p 0 1 0
chr16:89637834|89638195 hsa-miR-3692-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6089 1 0 0
chr16:89637834|89638195 hsa-miR-6746-5p 1 1 0
chr16:89637834|89638195 hsa-miR-4722-5p 0 1 0
chr16:89637834|89638195 hsa-miR-6727-5p 1 0 0
chr16:89637834|89638195 hsa-miR-3189-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6796-5p 1 1 0
chr16:89637834|89638195 hsa-miR-4697-3p 1 0 0
chr16:89637834|89638195 hsa-miR-6827-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6798-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6810-5p 1 1 0
chr16:89637834|89638195 hsa-miR-5008-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6852-5p 0 1 0
chr16:89637834|89638195 hsa-miR-939-3p 1 0 0
chr16:89637834|89638195 hsa-miR-1226-5p 1 0 0
chr16:89637834|89638195 hsa-miR-4763-5p 1 0 0
chr16:89637834|89638195 hsa-miR-1229-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6894-3p 1 0 0
chr16:89637834|89638195 hsa-miR-4640-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6803-3p 1 0 0
chr16:89637834|89638195 hsa-miR-5001-3p 1 1 0
chr16:89637834|89638195 hsa-miR-652-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6771-5p 1 0 0
chr16:89637834|89638195 hsa-miR-92b-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6749-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6847-5p 0 1 0
chr16:89637834|89638195 hsa-miR-4787-5p 1 0 0
chr16:89637834|89638195 hsa-miR-5196-3p 0 1 0
chr16:89637834|89638195 hsa-miR-6717-5p 0 1 0
chr16:89637834|89638195 hsa-miR-6813-3p 1 0 0
chr16:89637834|89638195 hsa-miR-4758-3p 1 0 0
chr16:89637834|89638195 hsa-miR-4772-5p 0 1 0
chr16:89637834|89638195 hsa-miR-4802-5p 0 1 0
chr16:89637834|89638195 hsa-miR-1207-5p 1 0 0
chr16:89637834|89638195 hsa-miR-4763-3p 1 0 0
chr16:89637834|89638195 hsa-miR-6870-5p 0 1 0
chr16:89637834|89638195 hsa-miR-5001-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6726-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6743-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6756-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6803-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6813-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6851-5p 1 0 0
chr16:89637834|89638195 hsa-miR-7107-5p 1 0 0
chr16:89637834|89638195 hsa-miR-10401-5p 1 0 0
chr16:89637834|89638195 hsa-miR-7111-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6754-3p 0 1 0
chr16:89637834|89638195 hsa-miR-5189-5p 1 0 0
chr16:89637834|89638195 hsa-miR-328-5p 1 1 0
chr16:89637834|89638195 hsa-miR-4632-5p 1 0 0
chr16:89637834|89638195 hsa-miR-4649-5p 1 0 0
chr16:89637834|89638195 hsa-miR-4726-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6729-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6846-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6848-5p 1 0 0
chr16:89637834|89638195 hsa-miR-4758-5p 1 0 0
chr16:89637834|89638195 hsa-miR-377-5p 0 1 0
chr16:89637834|89638195 hsa-miR-6855-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6877-3p 1 0 0
chr16:89637834|89638195 hsa-miR-4700-5p 0 1 0
chr16:89637834|89638195 hsa-miR-6766-5p 0 1 0
chr16:89637834|89638195 hsa-miR-4667-5p 0 1 0
chr16:89637834|89638195 hsa-miR-5591-5p 1 0 0
chr16:89637834|89638195 hsa-miR-6791-5p 1 1 0
chr16:89637834|89638195 hsa-miR-6792-3p 0 1 0
chr16:89637834|89638195 hsa-miR-6862-3p 1 0 0
chr16:89637834|89638195 hsa-miR-6512-3p 0 1 0
chr16:89637834|89638195 hsa-miR-6884-5p 0 1 0
chr16:89637834|89638195 hsa-miR-4701-5p 0 1 0
chr16:89637834|89638195 hsa-miR-4691-5p 0 1 0
chr16:89637834|89638195 hsa-miR-323b-5p 0 1 0
chr16:89637834|89638195 hsa-miR-3619-5p 0 1 0
chr16:89637834|89638195 hsa-miR-10397-5p 0 1 0
chr16:89637834|89638195 hsa-miR-5195-3p 0 1 0
chr16:89637834|89638195 hsa-miR-494-5p 0 1 0
chr16:89637834|89638195 hsa-miR-412-3p 1 1 0
chr16:89637834|89638195 hsa-miR-410-5p 0 1 0
chr16:89637834|89638195 hsa-miR-4782-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr16:89637834|89638195
ORF Type ORF1
Protein Length 115
Nucleotide Length 345
Protein Sequence MEDVSKYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQVRMGWPPESPPPPPAGRLPHPCLSVPRPATSHRLPRRSPSRWTSWVAPAGPITATPLGLPASIATGGSCWPPSL
Nucleotide Sequence CTGGAGGACGTCTCCAAGTATCCAGACCTGATCGCTGAGCTGCTCAGGAGGAACTGGACGGAGGCGGAGGTCAAGGGCGCACTGGCTGACAACCTGCTGAGGGTCTTCGAGGCTGTGGAACAGGTGAGGATGGGGTGGCCACCTGAGTCTCCCCCACCACCACCAGCAGGCAGGCTGCCCCACCCGTGTCTGTCTGTCCCCAGGCCAGCAACCTCACACAGGCTCCCGAGGAGGAGCCCATCCCGCTGGACCAGCTGGGTGGCTCCTGCAGGACCCATTACGGCTACTCCTCTGGGGCTTCCAGCCTCCATCGCCACTGGGGGCTCCTGCTGGCCTCCCTCGCTC
CircID chr16:89637834|89638195
ORF Type ORF2
Protein Length 68
Nucleotide Length 204
Protein Sequence MSLPHHHQQAGCPTRVCLSPGQQPHTGSRGGAHPAGPAGWLLQDPLRLLLWGFQPPSPLGAPAGLPRS
Nucleotide Sequence CTGAGTCTCCCCCACCACCACCAGCAGGCAGGCTGCCCCACCCGTGTCTGTCTGTCCCCAGGCCAGCAACCTCACACAGGCTCCCGAGGAGGAGCCCATCCCGCTGGACCAGCTGGGTGGCTCCTGCAGGACCCATTACGGCTACTCCTCTGGGGCTTCCAGCCTCCATCGCCACTGGGGGCTCCTGCTGGCCTCCCTCGCTCC
CircID chr16:89637834|89638195
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MDQLGGSCRTHYGYSSGASSLHRHWGLLLASLAP
Nucleotide Sequence CTGGACCAGCTGGGTGGCTCCTGCAGGACCCATTACGGCTACTCCTCTGGGGCTTCCAGCCTCCATCGCCACTGGGGGCTCCTGCTGGCCTCCCTCGCTCCC
CircID chr16:89637834|89638195
ORF Type ORF4
Protein Length 108
Nucleotide Length 324
Protein Sequence MEAGSPRGVAVMGPAGATQLVQRDGLLLGSLCEVAGLGTDRHGWGSLPAGGGGGDSGGHPILTCSTASKTLSRLSASAPLTSASVQFLLSSSAIRSGYLETSSSPSGT
Nucleotide Sequence ATGGAGGCTGGAAGCCCCAGAGGAGTAGCCGTAATGGGTCCTGCAGGAGCCACCCAGCTGGTCCAGCGGGATGGGCTCCTCCTCGGGAGCCTGTGTGAGGTTGCTGGCCTGGGGACAGACAGACACGGGTGGGGCAGCCTGCCTGCTGGTGGTGGTGGGGGAGACTCAGGTGGCCACCCCATCCTCACCTGTTCCACAGCCTCGAAGACCCTCAGCAGGTTGTCAGCCAGTGCGCCCTTGACCTCCGCCTCCGTCCAGTTCCTCCTGAGCAGCTCAGCGATCAGGTCTGGATACTTGGAGACGTCCTCCAGCCCCTCAGGGACC
CircID chr16:89637834|89638195
ORF Type ORF5
Protein Length 66
Nucleotide Length 201
Protein Sequence MQEPPSWSSGMGSSSGACVRLLAWGQTDTGGAACLLVVVGETQVATPSSPVPQPRRPSAGCQPVRP
Nucleotide Sequence CTGCAGGAGCCACCCAGCTGGTCCAGCGGGATGGGCTCCTCCTCGGGAGCCTGTGTGAGGTTGCTGGCCTGGGGACAGACAGACACGGGTGGGGCAGCCTGCCTGCTGGTGGTGGTGGGGGAGACTCAGGTGGCCACCCCATCCTCACCTGTTCCACAGCCTCGAAGACCCTCAGCAGGTTGTCAGCCAGTGCGCCCTTGA
CircID chr16:89637834|89638195
ORF Type ORF6
Protein Length 46
Nucleotide Length 138
Protein Sequence MFHSLEDPQQVVSQCALDLRLRPVPPEQLSDQVWILGDVLQPLRDP
Nucleotide Sequence CTGTTCCACAGCCTCGAAGACCCTCAGCAGGTTGTCAGCCAGTGCGCCCTTGACCTCCGCCTCCGTCCAGTTCCTCCTGAGCAGCTCAGCGATCAGGTCTGGATACTTGGAGACGTCCTCCAGCCCCTCAGGGACCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab