CircRNA Information

General Information
circRNA Basic Information
CircID chr16:89645652|89645808
Strand -
CircType exon
Host Gene ENSG00000131165.13;
Algorism CIRI2;
Sequence CTCCTGCCCGCTGAGGTGGTGCGGAGAGGCCTCAGGGAGTTGTTTGGCAACAGGGCAGCCCTGACCCCCTCTGGCTGATGGGAAGCAGCATGTCTGCTGCCCCAGAGTCTGAAGGCCCCCACAGTGCTGGGTGAAAGTCCACAGGGCCCCTCTTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:89645652|89645808 hsa-miR-326 0 0 1
chr16:89645652|89645808 hsa-miR-637 1 1 1
chr16:89645652|89645808 hsa-miR-874-5p 0 0 1
chr16:89645652|89645808 hsa-miR-874-3p 0 0 1
chr16:89645652|89645808 hsa-miR-922 0 0 1
chr16:89645652|89645808 hsa-miR-1291 0 1 1
chr16:89645652|89645808 hsa-miR-491-5p 0 0 1
chr16:89645652|89645808 hsa-miR-486-3p 0 1 1
chr16:89645652|89645808 hsa-miR-146b-3p 0 1 1
chr16:89645652|89645808 hsa-miR-423-5p 0 0 1
chr16:89645652|89645808 hsa-miR-125a-5p 0 1 1
chr16:89645652|89645808 hsa-miR-330-5p 0 0 1
chr16:89645652|89645808 hsa-miR-516a-3p 0 0 1
chr16:89645652|89645808 hsa-miR-220b 0 0 1
chr16:89645652|89645808 hsa-miR-125b 0 0 1
chr16:89645652|89645808 hsa-miR-1274b 0 0 1
chr16:89645652|89645808 hsa-miR-923 0 0 1
chr16:89645652|89645808 hsa-miR-3142 0 1 0
chr16:89645652|89645808 hsa-miR-3166 0 1 0
chr16:89645652|89645808 hsa-miR-4322 1 0 0
chr16:89645652|89645808 hsa-miR-4447 0 1 0
chr16:89645652|89645808 hsa-miR-4688 0 1 0
chr16:89645652|89645808 hsa-miR-4741 1 0 0
chr16:89645652|89645808 hsa-miR-8058 0 1 0
chr16:89645652|89645808 hsa-miR-8089 1 0 0
chr16:89645652|89645808 hsa-miR-134-3p 1 0 0
chr16:89645652|89645808 hsa-miR-3157-5p 0 1 0
chr16:89645652|89645808 hsa-miR-7114-5p 1 0 0
chr16:89645652|89645808 hsa-miR-3189-5p 1 0 0
chr16:89645652|89645808 hsa-miR-6796-5p 0 1 0
chr16:89645652|89645808 hsa-miR-6732-5p 0 1 0
chr16:89645652|89645808 hsa-miR-6786-5p 1 0 0
chr16:89645652|89645808 hsa-miR-3944-3p 1 0 0
chr16:89645652|89645808 hsa-miR-7113-3p 0 1 0
chr16:89645652|89645808 hsa-miR-6501-5p 0 1 0
chr16:89645652|89645808 hsa-miR-106b-3p 1 0 0
chr16:89645652|89645808 hsa-miR-3614-3p 0 1 0
chr16:89645652|89645808 hsa-miR-4649-3p 0 1 0
chr16:89645652|89645808 hsa-miR-514a-5p 0 1 0
chr16:89645652|89645808 hsa-miR-367-5p 0 1 0
chr16:89645652|89645808 hsa-miR-744-3p 0 1 0
chr16:89645652|89645808 hsa-miR-6813-5p 1 0 0
chr16:89645652|89645808 hsa-miR-328-5p 1 0 0
chr16:89645652|89645808 hsa-miR-4745-5p 1 0 0
chr16:89645652|89645808 hsa-miR-6846-5p 1 0 0
chr16:89645652|89645808 hsa-miR-365b-5p 1 0 0
chr16:89645652|89645808 hsa-miR-1914-3p 1 0 0
chr16:89645652|89645808 hsa-miR-2682-3p 0 1 0
chr16:89645652|89645808 hsa-miR-4757-5p 0 1 0
chr16:89645652|89645808 hsa-miR-6862-3p 1 1 0
chr16:89645652|89645808 hsa-miR-5009-5p 0 1 0
chr16:89645652|89645808 hsa-miR-6775-3p 0 1 0
chr16:89645652|89645808 hsa-miR-6769b-3p 0 1 0
chr16:89645652|89645808 hsa-miR-6744-3p 0 1 0
chr16:89645652|89645808 hsa-miR-3619-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:89645652|89645808
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MWGPSDSGAADMLLPISQRGSGLPCCQTTP
Nucleotide Sequence CTGTGGGGGCCTTCAGACTCTGGGGCAGCAGACATGCTGCTTCCCATCAGCCAGAGGGGGTCAGGGCTGCCCTGTTGCCAAACAACTCCCTGA

CircID chr16:89645652|89645808
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MWTFTQHCGGLQTLGQQTCCFPSARGGQGCPVAKQLPEASPHHLSGQE
Nucleotide Sequence CTGTGGACTTTCACCCAGCACTGTGGGGGCCTTCAGACTCTGGGGCAGCAGACATGCTGCTTCCCATCAGCCAGAGGGGGTCAGGGCTGCCCTGTTGCCAAACAACTCCCTGAGGCCTCTCCGCACCACCTCAGCGGGCAGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites