CircRNA Information

General Information
circRNA Basic Information
CircID chr16:89935646|89935809
Strand -
CircType exon
Host Gene ENSG00000198211.8;
Algorism CIRI2;
Sequence ACGGGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGACGCCACGGCCGAGGAAGAGGGCGAGATGTACGAAGACGACGAGGAGGAGTCGGAGGCCCAGGGCCCCAAGTGAAGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr16:89935646|89935809 hsa-miR-1234-3p 0 0 1
chr16:89935646|89935809 hsa-miR-1236-5p 0 0 1
chr16:89935646|89935809 hsa-miR-1236-3p 0 0 1
chr16:89935646|89935809 hsa-miR-1238-5p 0 0 1
chr16:89935646|89935809 hsa-miR-1238-3p 0 0 1
chr16:89935646|89935809 hsa-miR-1206 0 0 1
chr16:89935646|89935809 hsa-miR-1291 0 0 1
chr16:89935646|89935809 hsa-miR-1249-5p 0 0 1
chr16:89935646|89935809 hsa-miR-1249-3p 0 0 1
chr16:89935646|89935809 hsa-miR-1307-5p 0 0 1
chr16:89935646|89935809 hsa-miR-1307-3p 0 0 1
chr16:89935646|89935809 hsa-miR-1234 0 0 1
chr16:89935646|89935809 hsa-miR-138 0 0 1
chr16:89935646|89935809 hsa-miR-4268 1 0 0
chr16:89935646|89935809 hsa-miR-4292 0 1 0
chr16:89935646|89935809 hsa-miR-3615 1 1 0
chr16:89935646|89935809 hsa-miR-3917 0 1 0
chr16:89935646|89935809 hsa-miR-4663 1 0 0
chr16:89935646|89935809 hsa-miR-5193 1 0 0
chr16:89935646|89935809 hsa-miR-12116 1 0 0
chr16:89935646|89935809 hsa-miR-12126 0 1 0
chr16:89935646|89935809 hsa-miR-138-5p 0 1 0
chr16:89935646|89935809 hsa-miR-132-5p 0 1 0
chr16:89935646|89935809 hsa-miR-7155-5p 1 0 0
chr16:89935646|89935809 hsa-miR-4665-3p 1 1 0
chr16:89935646|89935809 hsa-miR-133a-5p 0 1 0
chr16:89935646|89935809 hsa-miR-3692-5p 0 1 0
chr16:89935646|89935809 hsa-miR-6875-3p 0 1 0
chr16:89935646|89935809 hsa-miR-6726-3p 0 1 0
chr16:89935646|89935809 hsa-miR-877-3p 1 0 0
chr16:89935646|89935809 hsa-miR-6868-3p 1 0 0
chr16:89935646|89935809 hsa-miR-6735-3p 1 0 0
chr16:89935646|89935809 hsa-miR-4436b-5p 1 0 0
chr16:89935646|89935809 hsa-miR-939-3p 1 1 0
chr16:89935646|89935809 hsa-miR-5001-3p 1 0 0
chr16:89935646|89935809 hsa-miR-5196-3p 1 0 0
chr16:89935646|89935809 hsa-miR-4733-3p 0 1 0
chr16:89935646|89935809 hsa-miR-4638-5p 1 1 0
chr16:89935646|89935809 hsa-miR-6730-3p 1 0 0
chr16:89935646|89935809 hsa-miR-6872-3p 0 1 0
chr16:89935646|89935809 hsa-miR-6837-3p 0 1 0
chr16:89935646|89935809 hsa-miR-1296-5p 1 0 0
chr16:89935646|89935809 hsa-miR-3184-3p 1 0 0
chr16:89935646|89935809 hsa-miR-7158-5p 1 0 0
chr16:89935646|89935809 hsa-miR-320a-5p 1 0 0
chr16:89935646|89935809 hsa-miR-2682-3p 1 0 0
chr16:89935646|89935809 hsa-miR-4757-5p 1 0 0
chr16:89935646|89935809 hsa-miR-6792-3p 1 0 0
chr16:89935646|89935809 hsa-miR-10401-3p 1 0 0
chr16:89935646|89935809 hsa-miR-6805-3p 1 0 0
chr16:89935646|89935809 hsa-miR-6775-3p 0 1 0
chr16:89935646|89935809 hsa-miR-10392-3p 1 0 0
chr16:89935646|89935809 hsa-miR-330-5p 0 1 0
chr16:89935646|89935809 hsa-miR-6744-3p 1 0 0
chr16:89935646|89935809 hsa-miR-6827-3p 0 1 0
chr16:89935646|89935809 hsa-miR-494-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr16:89935646|89935809
ORF Type ORF1
Protein Length 48
Nucleotide Length 147
Protein Sequence MDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEAQGPK
Nucleotide Sequence ATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGACGCCACGGCCGAGGAAGAGGGCGAGATGTACGAAGACGACGAGGAGGAGTCGGAGGCCCAGGGCCCCAAGTGA

CircID chr16:89935646|89935809
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MGPWASDSSSSSSYISPSSSAVASWYCWYSDTRSFMLLSASVNSISSMPSP
Nucleotide Sequence TTGGGGCCCTGGGCCTCCGACTCCTCCTCGTCGTCTTCGTACATCTCGCCCTCTTCCTCGGCCGTGGCGTCCTGGTACTGCTGGTACTCGGACACCAGGTCGTTCATGTTGCTCTCGGCCTCGGTGAACTCCATCTCGTCCATGCCCTCGCCC

CircID chr16:89935646|89935809
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MGLRLLLVVFVHLALFLGRGVLVLLVLGHQVVHVALGLGELHLVHALAR
Nucleotide Sequence CTGGGCCTCCGACTCCTCCTCGTCGTCTTCGTACATCTCGCCCTCTTCCTCGGCCGTGGCGTCCTGGTACTGCTGGTACTCGGACACCAGGTCGTTCATGTTGCTCTCGGCCTCGGTGAACTCCATCTCGTCCATGCCCTCGCCCGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites