CircNet

General Information

circRNA Basic Information

CircID	chr16:89959026\|89959178
Strand	+
CircType	exon
Host Gene	ENSG00000140995.15;
Algorism	CIRI2;
Sequence	TCCTCGTCTGGGTCTCGGCCCACCTGTGCAGGTGTACCAGGTCTGAATGAGCCCCCAGATGATGGTGTTACACTTGTCACAGGTCTGCTTGACGCTCTTGCTCTTCTCCTTGTAAAAGCGGTGCTCAAGGAGCACTCGGATGTTTGGCTCATC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr16:89959026\|89959178	hsa-miR-335-5p	0	0	1
chr16:89959026\|89959178	hsa-miR-335-3p	0	0	1
chr16:89959026\|89959178	hsa-miR-552-5p	0	0	1
chr16:89959026\|89959178	hsa-miR-552-3p	0	0	1
chr16:89959026\|89959178	hsa-miR-624-5p	0	0	1
chr16:89959026\|89959178	hsa-miR-624-3p	0	0	1
chr16:89959026\|89959178	hsa-miR-631	0	0	1
chr16:89959026\|89959178	hsa-miR-637	1	1	1
chr16:89959026\|89959178	hsa-miR-541-5p	0	0	1
chr16:89959026\|89959178	hsa-miR-541-3p	0	0	1
chr16:89959026\|89959178	hsa-miR-1253	0	0	1
chr16:89959026\|89959178	hsa-miR-654-5p	0	1	1
chr16:89959026\|89959178	hsa-miR-542-3p	0	0	1
chr16:89959026\|89959178	hsa-miR-194	0	0	1
chr16:89959026\|89959178	hsa-miR-3661	0	1	0
chr16:89959026\|89959178	hsa-miR-3684	0	1	0
chr16:89959026\|89959178	hsa-miR-4428	0	1	0
chr16:89959026\|89959178	hsa-miR-4516	1	1	0
chr16:89959026\|89959178	hsa-miR-6760-5p	1	1	0
chr16:89959026\|89959178	hsa-miR-6803-5p	1	0	0
chr16:89959026\|89959178	hsa-miR-1237-5p	1	0	0
chr16:89959026\|89959178	hsa-miR-4725-3p	1	0	0
chr16:89959026\|89959178	hsa-miR-6848-5p	0	1	0
chr16:89959026\|89959178	hsa-miR-6856-5p	1	0	0
chr16:89959026\|89959178	hsa-miR-3173-3p	1	0	0
chr16:89959026\|89959178	hsa-miR-6811-5p	1	0	0
chr16:89959026\|89959178	hsa-miR-21-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr16:89959026\|89959178
ORF Type	ORF1
Protein Length	37
Nucleotide Length	111
Protein Sequence	MNEPPDDGVTLVTGLLDALALLLVKAVLKEHSDVWLI
Nucleotide Sequence	CTGAATGAGCCCCCAGATGATGGTGTTACACTTGTCACAGGTCTGCTTGACGCTCTTGCTCTTCTCCTTGTAAAAGCGGTGCTCAAGGAGCACTCGGATGTTTGGCTCATC

CircID	chr16:89959026\|89959178
ORF Type	ORF2
Protein Length	50
Nucleotide Length	150
Protein Sequence	MSQTSECSLSTAFTRRRARASSRPVTSVTPSSGGSFRPGTPAQVGRDPDE
Nucleotide Sequence	ATGAGCCAAACATCCGAGTGCTCCTTGAGCACCGCTTTTACAAGGAGAAGAGCAAGAGCGTCAAGCAGACCTGTGACAAGTGTAACACCATCATCTGGGGGCTCATTCAGACCTGGTACACCTGCACAGGTGGGCCGAGACCCAGACGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information