CircRNA Information

General Information
circRNA Basic Information
CircID chr17:10131092|10131245
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence GACTACTTTCTGAAACTCCTCCCTGACCCCTCCAGGTTACCCAGAACTTTTCTTCCTCCCCAGCGTGCCTCTTGCCACAGCTATATCTAGACCTCGAAGAGCAGCGCTTACTTGGTCTCTGTTTACCTATGATTACTGAGTTTTACTTTCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:10131092|10131245 hsa-miR-30a-5p 0 0 1
chr17:10131092|10131245 hsa-miR-30a-3p 0 0 1
chr17:10131092|10131245 hsa-miR-31-5p 0 0 1
chr17:10131092|10131245 hsa-miR-31-3p 0 0 1
chr17:10131092|10131245 hsa-miR-30d-5p 0 0 1
chr17:10131092|10131245 hsa-miR-30d-3p 0 0 1
chr17:10131092|10131245 hsa-miR-30b-5p 0 0 1
chr17:10131092|10131245 hsa-miR-30b-3p 0 0 1
chr17:10131092|10131245 hsa-miR-30e-5p 0 0 1
chr17:10131092|10131245 hsa-miR-30e-3p 0 0 1
chr17:10131092|10131245 hsa-miR-518e-5p 0 0 1
chr17:10131092|10131245 hsa-miR-518e-3p 0 0 1
chr17:10131092|10131245 hsa-miR-555 0 0 1
chr17:10131092|10131245 hsa-miR-559 0 0 1
chr17:10131092|10131245 hsa-miR-601 1 1 1
chr17:10131092|10131245 hsa-miR-619-5p 0 0 1
chr17:10131092|10131245 hsa-miR-619-3p 0 0 1
chr17:10131092|10131245 hsa-miR-649 0 0 1
chr17:10131092|10131245 hsa-miR-765 1 0 1
chr17:10131092|10131245 hsa-miR-939-5p 0 0 1
chr17:10131092|10131245 hsa-miR-939-3p 0 0 1
chr17:10131092|10131245 hsa-miR-548e-5p 0 0 1
chr17:10131092|10131245 hsa-miR-548e-3p 0 0 1
chr17:10131092|10131245 hsa-miR-548j-5p 0 0 1
chr17:10131092|10131245 hsa-miR-548j-3p 0 0 1
chr17:10131092|10131245 hsa-miR-1321 0 0 1
chr17:10131092|10131245 hsa-miR-490-3p 0 1 1
chr17:10131092|10131245 hsa-miR-548b-5p 0 0 1
chr17:10131092|10131245 hsa-miR-548d-5p 0 0 1
chr17:10131092|10131245 hsa-miR-548a-3p 0 0 1
chr17:10131092|10131245 hsa-miR-548c-5p 0 0 1
chr17:10131092|10131245 hsa-miR-548a-5p 0 0 1
chr17:10131092|10131245 hsa-miR-548i 0 0 1
chr17:10131092|10131245 hsa-miR-30c 0 0 1
chr17:10131092|10131245 hsa-miR-548f 0 0 1
chr17:10131092|10131245 hsa-miR-548h 0 0 1
chr17:10131092|10131245 hsa-miR-650 1 0 0
chr17:10131092|10131245 hsa-miR-3131 1 0 0
chr17:10131092|10131245 hsa-miR-3153 1 0 0
chr17:10131092|10131245 hsa-miR-3175 1 0 0
chr17:10131092|10131245 hsa-miR-3197 1 0 0
chr17:10131092|10131245 hsa-miR-4270 1 0 0
chr17:10131092|10131245 hsa-miR-4271 1 1 0
chr17:10131092|10131245 hsa-miR-3652 1 0 0
chr17:10131092|10131245 hsa-miR-3916 1 1 0
chr17:10131092|10131245 hsa-miR-4441 1 1 0
chr17:10131092|10131245 hsa-miR-4651 1 0 0
chr17:10131092|10131245 hsa-miR-4688 1 0 0
chr17:10131092|10131245 hsa-miR-4706 1 0 0
chr17:10131092|10131245 hsa-miR-4710 1 0 0
chr17:10131092|10131245 hsa-miR-4739 1 1 0
chr17:10131092|10131245 hsa-miR-5194 1 1 0
chr17:10131092|10131245 hsa-miR-5698 1 0 0
chr17:10131092|10131245 hsa-miR-5787 1 0 0
chr17:10131092|10131245 hsa-miR-6090 1 0 0
chr17:10131092|10131245 hsa-miR-6127 1 0 0
chr17:10131092|10131245 hsa-miR-6133 1 0 0
chr17:10131092|10131245 hsa-miR-6165 1 0 0
chr17:10131092|10131245 hsa-miR-6745 1 0 0
chr17:10131092|10131245 hsa-miR-8074 1 0 0
chr17:10131092|10131245 hsa-miR-8085 1 0 0
chr17:10131092|10131245 hsa-miR-8089 1 0 0
chr17:10131092|10131245 hsa-miR-12128 1 1 0
chr17:10131092|10131245 hsa-miR-370-3p 1 0 0
chr17:10131092|10131245 hsa-miR-4731-5p 0 1 0
chr17:10131092|10131245 hsa-miR-6861-5p 1 1 0
chr17:10131092|10131245 hsa-miR-7106-5p 1 1 0
chr17:10131092|10131245 hsa-miR-6825-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6894-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6857-5p 1 0 0
chr17:10131092|10131245 hsa-miR-4687-3p 1 0 0
chr17:10131092|10131245 hsa-miR-6799-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6728-5p 1 0 0
chr17:10131092|10131245 hsa-miR-4786-5p 0 1 0
chr17:10131092|10131245 hsa-miR-7114-5p 1 0 0
chr17:10131092|10131245 hsa-miR-7847-3p 1 0 0
chr17:10131092|10131245 hsa-miR-4695-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6746-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6730-5p 1 0 0
chr17:10131092|10131245 hsa-miR-7154-3p 1 0 0
chr17:10131092|10131245 hsa-miR-6776-5p 1 0 0
chr17:10131092|10131245 hsa-miR-432-5p 1 0 0
chr17:10131092|10131245 hsa-miR-7108-5p 1 0 0
chr17:10131092|10131245 hsa-miR-3180-3p 1 0 0
chr17:10131092|10131245 hsa-miR-6881-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6782-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6786-5p 1 0 0
chr17:10131092|10131245 hsa-miR-5088-5p 1 0 0
chr17:10131092|10131245 hsa-miR-7109-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6740-5p 1 0 0
chr17:10131092|10131245 hsa-miR-1229-5p 1 0 0
chr17:10131092|10131245 hsa-miR-4640-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6771-5p 1 0 0
chr17:10131092|10131245 hsa-miR-3202 1 0 0
chr17:10131092|10131245 hsa-miR-149-3p 1 0 0
chr17:10131092|10131245 hsa-miR-6824-5p 1 0 0
chr17:10131092|10131245 hsa-miR-423-5p 1 0 0
chr17:10131092|10131245 hsa-miR-1225-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6801-5p 1 0 0
chr17:10131092|10131245 hsa-miR-1207-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6870-5p 1 0 0
chr17:10131092|10131245 hsa-miR-1343-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6737-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6743-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6754-5p 1 1 0
chr17:10131092|10131245 hsa-miR-6756-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6803-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6819-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6851-5p 1 0 0
chr17:10131092|10131245 hsa-miR-7110-5p 1 0 0
chr17:10131092|10131245 hsa-miR-11181-3p 1 0 0
chr17:10131092|10131245 hsa-miR-1249-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6722-3p 1 0 0
chr17:10131092|10131245 hsa-miR-6751-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6763-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6779-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6780a-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6797-5p 1 0 0
chr17:10131092|10131245 hsa-miR-7111-5p 1 1 0
chr17:10131092|10131245 hsa-miR-4728-5p 1 0 0
chr17:10131092|10131245 hsa-miR-5196-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6780b-5p 1 0 0
chr17:10131092|10131245 hsa-miR-328-5p 1 0 0
chr17:10131092|10131245 hsa-miR-4725-3p 1 0 0
chr17:10131092|10131245 hsa-miR-6738-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6777-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6795-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6858-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6883-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6887-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6739-5p 0 1 0
chr17:10131092|10131245 hsa-miR-1914-3p 1 0 0
chr17:10131092|10131245 hsa-miR-3116 1 0 0
chr17:10131092|10131245 hsa-miR-4700-5p 1 1 0
chr17:10131092|10131245 hsa-miR-4646-5p 1 0 0
chr17:10131092|10131245 hsa-miR-4747-5p 1 0 0
chr17:10131092|10131245 hsa-miR-4716-3p 1 0 0
chr17:10131092|10131245 hsa-miR-6785-5p 1 0 0
chr17:10131092|10131245 hsa-miR-4667-5p 1 1 0
chr17:10131092|10131245 hsa-miR-6791-5p 1 0 0
chr17:10131092|10131245 hsa-miR-520d-3p 0 1 0
chr17:10131092|10131245 hsa-miR-3619-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6715b-5p 1 0 0
chr17:10131092|10131245 hsa-miR-6733-5p 1 1 0
chr17:10131092|10131245 hsa-miR-518c-3p 0 1 0
chr17:10131092|10131245 hsa-miR-520c-3p 0 1 0
chr17:10131092|10131245 hsa-miR-548aq-5p 0 1 0
chr17:10131092|10131245 hsa-miR-518f-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:10131092|10131245
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MKLLPDPSRLPRTFLPPQRASCHSYI
Nucleotide Sequence CTGAAACTCCTCCCTGACCCCTCCAGGTTACCCAGAACTTTTCTTCCTCCCCAGCGTGCCTCTTGCCACAGCTATATCTAG
CircID chr17:10131092|10131245
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MTPPGYPELFFLPSVPLATAISRPRRAALTWSLFTYDY
Nucleotide Sequence CTGACCCCTCCAGGTTACCCAGAACTTTTCTTCCTCCCCAGCGTGCCTCTTGCCACAGCTATATCTAGACCTCGAAGAGCAGCGCTTACTTGGTCTCTGTTTACCTATGATTACTGA
CircID chr17:10131092|10131245
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MPQLYLDLEEQRLLGLCLPMITEFYFP
Nucleotide Sequence TTGCCACAGCTATATCTAGACCTCGAAGAGCAGCGCTTACTTGGTCTCTGTTTACCTATGATTACTGAGTTTTACTTTCCC
CircID chr17:10131092|10131245
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MWQEARWGGRKVLGNLEGSGRSFRK
Nucleotide Sequence CTGTGGCAAGAGGCACGCTGGGGAGGAAGAAAAGTTCTGGGTAACCTGGAGGGGTCAGGGAGGAGTTTCAGAAAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab