CircRNA Information

General Information
circRNA Basic Information
CircID chr17:1100700|1109050
Strand -
CircType exon
Host Gene ENSG00000159842.13;
Algorism CIRI2;
Sequence CAGCTTCCTCATCTCCAGGCCTTTCCCTGCTTCCACCTTCACAGCCACCAGGAAGGGGGACCCTGAGCCGGGGCTGGTCGGGGTTCCCAGCTCGCACTCCTCCAGGAGAAACACATCTTCGTCCTCCAGAACCTTGTCCAGCAAGCCTATCGC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:1100700|1109050 hsa-miR-143-5p 0 0 1
chr17:1100700|1109050 hsa-miR-143-3p 0 0 1
chr17:1100700|1109050 hsa-miR-493-5p 0 0 1
chr17:1100700|1109050 hsa-miR-493-3p 0 0 1
chr17:1100700|1109050 hsa-miR-620 0 0 1
chr17:1100700|1109050 hsa-miR-624-5p 0 0 1
chr17:1100700|1109050 hsa-miR-624-3p 0 0 1
chr17:1100700|1109050 hsa-miR-765 0 0 1
chr17:1100700|1109050 hsa-miR-1287-5p 0 0 1
chr17:1100700|1109050 hsa-miR-1287-3p 0 0 1
chr17:1100700|1109050 hsa-miR-1299 0 0 1
chr17:1100700|1109050 hsa-miR-1266-5p 0 0 1
chr17:1100700|1109050 hsa-miR-1266-3p 0 0 1
chr17:1100700|1109050 hsa-miR-1270 0 1 1
chr17:1100700|1109050 hsa-miR-1292-5p 0 0 1
chr17:1100700|1109050 hsa-miR-1292-3p 0 0 1
chr17:1100700|1109050 hsa-miR-671-5p 1 0 1
chr17:1100700|1109050 hsa-miR-576-3p 0 0 1
chr17:1100700|1109050 hsa-miR-516b 0 0 1
chr17:1100700|1109050 hsa-miR-1254 0 0 1
chr17:1100700|1109050 hsa-miR-24 0 0 1
chr17:1100700|1109050 hsa-miR-612 1 1 0
chr17:1100700|1109050 hsa-miR-1261 0 1 0
chr17:1100700|1109050 hsa-miR-1268a 1 0 0
chr17:1100700|1109050 hsa-miR-2861 1 0 0
chr17:1100700|1109050 hsa-miR-378c 1 0 0
chr17:1100700|1109050 hsa-miR-4327 1 0 0
chr17:1100700|1109050 hsa-miR-4270 1 0 0
chr17:1100700|1109050 hsa-miR-3654 1 0 0
chr17:1100700|1109050 hsa-miR-1268b 1 0 0
chr17:1100700|1109050 hsa-miR-4456 0 1 0
chr17:1100700|1109050 hsa-miR-4498 1 0 0
chr17:1100700|1109050 hsa-miR-4505 1 0 0
chr17:1100700|1109050 hsa-miR-4533 1 0 0
chr17:1100700|1109050 hsa-miR-4657 1 0 0
chr17:1100700|1109050 hsa-miR-4658 1 0 0
chr17:1100700|1109050 hsa-miR-4675 1 0 0
chr17:1100700|1109050 hsa-miR-4706 1 0 0
chr17:1100700|1109050 hsa-miR-4739 1 0 0
chr17:1100700|1109050 hsa-miR-6132 1 0 0
chr17:1100700|1109050 hsa-miR-6133 1 0 0
chr17:1100700|1109050 hsa-miR-6165 1 0 0
chr17:1100700|1109050 hsa-miR-6745 1 0 0
chr17:1100700|1109050 hsa-miR-6860 1 1 0
chr17:1100700|1109050 hsa-miR-12114 1 1 0
chr17:1100700|1109050 hsa-miR-12118 1 0 0
chr17:1100700|1109050 hsa-miR-12128 0 1 0
chr17:1100700|1109050 hsa-miR-370-3p 1 0 0
chr17:1100700|1109050 hsa-miR-4433b-3p 0 1 0
chr17:1100700|1109050 hsa-miR-504-3p 0 1 0
chr17:1100700|1109050 hsa-miR-7106-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6894-5p 1 1 0
chr17:1100700|1109050 hsa-miR-4687-3p 1 0 0
chr17:1100700|1109050 hsa-miR-6799-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6510-5p 1 1 0
chr17:1100700|1109050 hsa-miR-8071 1 0 0
chr17:1100700|1109050 hsa-miR-6804-5p 1 1 0
chr17:1100700|1109050 hsa-miR-6833-5p 1 0 0
chr17:1100700|1109050 hsa-miR-7114-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6089 1 0 0
chr17:1100700|1109050 hsa-miR-6880-5p 1 0 0
chr17:1100700|1109050 hsa-miR-7847-3p 1 1 0
chr17:1100700|1109050 hsa-miR-4695-5p 1 0 0
chr17:1100700|1109050 hsa-miR-7154-3p 0 1 0
chr17:1100700|1109050 hsa-miR-6875-3p 1 0 0
chr17:1100700|1109050 hsa-miR-3605-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6748-5p 1 0 0
chr17:1100700|1109050 hsa-miR-3190-3p 1 1 0
chr17:1100700|1109050 hsa-miR-6798-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6760-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6881-5p 1 0 0
chr17:1100700|1109050 hsa-miR-885-3p 1 0 0
chr17:1100700|1109050 hsa-miR-4690-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6749-5p 1 0 0
chr17:1100700|1109050 hsa-miR-149-3p 1 0 0
chr17:1100700|1109050 hsa-miR-6828-5p 1 1 0
chr17:1100700|1109050 hsa-miR-516b-5p 0 1 0
chr17:1100700|1109050 hsa-miR-4707-5p 0 1 0
chr17:1100700|1109050 hsa-miR-4732-3p 0 1 0
chr17:1100700|1109050 hsa-miR-6792-5p 1 0 0
chr17:1100700|1109050 hsa-miR-1207-5p 1 1 0
chr17:1100700|1109050 hsa-miR-1233-5p 1 0 0
chr17:1100700|1109050 hsa-miR-4763-3p 1 0 0
chr17:1100700|1109050 hsa-miR-6769b-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6778-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6893-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6726-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6752-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6754-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6851-5p 1 1 0
chr17:1100700|1109050 hsa-miR-7107-5p 1 1 0
chr17:1100700|1109050 hsa-miR-11181-3p 1 0 0
chr17:1100700|1109050 hsa-miR-1249-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6722-3p 1 0 0
chr17:1100700|1109050 hsa-miR-6797-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6808-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6879-5p 1 0 0
chr17:1100700|1109050 hsa-miR-7111-5p 1 0 0
chr17:1100700|1109050 hsa-miR-3127-3p 0 1 0
chr17:1100700|1109050 hsa-miR-4685-3p 1 1 0
chr17:1100700|1109050 hsa-miR-3620-5p 1 0 0
chr17:1100700|1109050 hsa-miR-5189-5p 1 0 0
chr17:1100700|1109050 hsa-miR-5196-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6780b-5p 1 1 0
chr17:1100700|1109050 hsa-miR-6836-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6862-5p 1 0 0
chr17:1100700|1109050 hsa-miR-4749-5p 1 1 0
chr17:1100700|1109050 hsa-miR-6794-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6846-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6848-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6858-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6831-5p 1 0 0
chr17:1100700|1109050 hsa-miR-4665-5p 1 0 0
chr17:1100700|1109050 hsa-miR-4700-5p 0 1 0
chr17:1100700|1109050 hsa-miR-3173-3p 1 0 0
chr17:1100700|1109050 hsa-miR-6891-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6750-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6785-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6790-5p 1 0 0
chr17:1100700|1109050 hsa-miR-6756-3p 0 1 0
chr17:1100700|1109050 hsa-miR-10392-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:1100700|1109050
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MVGVPSSHSSRRNTSSSSRTLSSKPI
Nucleotide Sequence CTGGTCGGGGTTCCCAGCTCGCACTCCTCCAGGAGAAACACATCTTCGTCCTCCAGAACCTTGTCCAGCAAGCCTATC
CircID chr17:1100700|1109050
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MLPPSQPPGRGTLSRGWSGFPARTPPGETHLRPPEPCPASLS
Nucleotide Sequence CTGCTTCCACCTTCACAGCCACCAGGAAGGGGGACCCTGAGCCGGGGCTGGTCGGGGTTCCCAGCTCGCACTCCTCCAGGAGAAACACATCTTCGTCCTCCAGAACCTTGTCCAGCAAGCCTATCG
CircID chr17:1100700|1109050
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MLDKVLEDEDVFLLEECELGTPTSPGSGSPFLVAVKVEAGKGLEMRKL
Nucleotide Sequence TTGCTGGACAAGGTTCTGGAGGACGAAGATGTGTTTCTCCTGGAGGAGTGCGAGCTGGGAACCCCGACCAGCCCCGGCTCAGGGTCCCCCTTCCTGGTGGCTGTGAAGGTGGAAGCAGGGAAAGGCCTGGAGATGAGGAAGCTG
CircID chr17:1100700|1109050
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MCFSWRSASWEPRPAPAQGPPSWWL
Nucleotide Sequence ATGTGTTTCTCCTGGAGGAGTGCGAGCTGGGAACCCCGACCAGCCCCGGCTCAGGGTCCCCCTTCCTGGTGGCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab