CircRNA Information

General Information
circRNA Basic Information
CircID chr17:1464483|1464693
Strand +
CircType exon
Host Gene ENSG00000197879.13;
Algorism CIRI2;
Sequence AGAGCAGAAGACAGATGCCCAAACAGGAGAAGGCACTTGCCCACGGTCATACGGCAGGTTGCCACAAAACCAAGATGGCAGCCCTTCCTCAGCGTGCCTCACTGCCACTCCCAGAGCCAGGGAGCCCCATAAAACCCACATCATGTCTTAAGAGTATATCTGGCTCCTTGACCAGCAATCGGCCCTGGGAGCCACCAGGTGGGAAAAGCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:1464483|1464693 hsa-miR-208a-5p 0 0 1
chr17:1464483|1464693 hsa-miR-208a-3p 0 0 1
chr17:1464483|1464693 hsa-miR-34a-5p 0 0 1
chr17:1464483|1464693 hsa-miR-34a-3p 0 0 1
chr17:1464483|1464693 hsa-miR-149-5p 0 0 1
chr17:1464483|1464693 hsa-miR-149-3p 0 0 1
chr17:1464483|1464693 hsa-miR-326 0 0 1
chr17:1464483|1464693 hsa-miR-449a 0 0 1
chr17:1464483|1464693 hsa-miR-519e-5p 0 0 1
chr17:1464483|1464693 hsa-miR-519e-3p 0 0 1
chr17:1464483|1464693 hsa-miR-629-5p 0 0 1
chr17:1464483|1464693 hsa-miR-629-3p 0 0 1
chr17:1464483|1464693 hsa-miR-641 0 0 1
chr17:1464483|1464693 hsa-miR-449b-5p 0 0 1
chr17:1464483|1464693 hsa-miR-449b-3p 0 0 1
chr17:1464483|1464693 hsa-miR-760 0 0 1
chr17:1464483|1464693 hsa-miR-208b-5p 0 0 1
chr17:1464483|1464693 hsa-miR-208b-3p 0 0 1
chr17:1464483|1464693 hsa-miR-1827 0 0 1
chr17:1464483|1464693 hsa-miR-299-3p 0 0 1
chr17:1464483|1464693 hsa-miR-1224-3p 0 0 1
chr17:1464483|1464693 hsa-miR-767-3p 0 0 1
chr17:1464483|1464693 hsa-miR-188-3p 0 0 1
chr17:1464483|1464693 hsa-miR-330-5p 0 0 1
chr17:1464483|1464693 hsa-miR-515-3p 1 0 1
chr17:1464483|1464693 hsa-miR-34c-5p 1 0 1
chr17:1464483|1464693 hsa-miR-1260 0 0 1
chr17:1464483|1464693 hsa-miR-1280 0 0 1
chr17:1464483|1464693 hsa-miR-138 0 0 1
chr17:1464483|1464693 hsa-miR-499-5p 0 0 1
chr17:1464483|1464693 hsa-miR-608 1 0 0
chr17:1464483|1464693 hsa-miR-1268a 1 0 0
chr17:1464483|1464693 hsa-miR-3147 1 0 0
chr17:1464483|1464693 hsa-miR-4270 1 0 0
chr17:1464483|1464693 hsa-miR-1268b 1 0 0
chr17:1464483|1464693 hsa-miR-4498 1 0 0
chr17:1464483|1464693 hsa-miR-4651 1 0 0
chr17:1464483|1464693 hsa-miR-4706 1 0 0
chr17:1464483|1464693 hsa-miR-4721 1 0 0
chr17:1464483|1464693 hsa-miR-4433b-3p 1 0 0
chr17:1464483|1464693 hsa-miR-3692-5p 1 0 0
chr17:1464483|1464693 hsa-miR-3192-5p 1 0 0
chr17:1464483|1464693 hsa-miR-7160-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6716-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6871-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6732-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6782-5p 1 0 0
chr17:1464483|1464693 hsa-miR-1226-5p 1 0 0
chr17:1464483|1464693 hsa-miR-204-3p 1 0 0
chr17:1464483|1464693 hsa-miR-4787-5p 1 0 0
chr17:1464483|1464693 hsa-miR-194-3p 1 0 0
chr17:1464483|1464693 hsa-miR-1207-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6865-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6743-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6752-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6803-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6851-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6751-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6763-5p 1 0 0
chr17:1464483|1464693 hsa-miR-4728-5p 1 0 0
chr17:1464483|1464693 hsa-miR-328-5p 1 0 0
chr17:1464483|1464693 hsa-miR-449c-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6777-5p 1 0 0
chr17:1464483|1464693 hsa-miR-6858-5p 1 0 0
chr17:1464483|1464693 hsa-miR-34b-5p 1 0 0
chr17:1464483|1464693 hsa-miR-3940-5p 1 0 0
chr17:1464483|1464693 hsa-miR-4646-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:1464483|1464693
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MPTVIRQVATKPRWQPFLSVPHCHSQSQGAP
Nucleotide Sequence TTGCCCACGGTCATACGGCAGGTTGCCACAAAACCAAGATGGCAGCCCTTCCTCAGCGTGCCTCACTGCCACTCCCAGAGCCAGGGAGCCCCATAA
CircID chr17:1464483|1464693
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MPQNQDGSPSSACLTATPRAREPHKTHIMS
Nucleotide Sequence TTGCCACAAAACCAAGATGGCAGCCCTTCCTCAGCGTGCCTCACTGCCACTCCCAGAGCCAGGGAGCCCCATAAAACCCACATCATGTCTTAA
CircID chr17:1464483|1464693
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MPKQEKALAHGHTAGCHKTKMAALPQRASLPLPEPGSPIKPTSCLKSISGSLTSNRPWEPPGGKS
Nucleotide Sequence ATGCCCAAACAGGAGAAGGCACTTGCCCACGGTCATACGGCAGGTTGCCACAAAACCAAGATGGCAGCCCTTCCTCAGCGTGCCTCACTGCCACTCCCAGAGCCAGGGAGCCCCATAAAACCCACATCATGTCTTAAGAGTATATCTGGCTCCTTGACCAGCAATCGGCCCTGGGAGCCACCAGGTGGGAAAAGC
CircID chr17:1464483|1464693
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MLVKEPDILLRHDVGFMGLPGSGSGSEAR
Nucleotide Sequence TTGCTGGTCAAGGAGCCAGATATACTCTTAAGACATGATGTGGGTTTTATGGGGCTCCCTGGCTCTGGGAGTGGCAGTGAGGCACGCTGA
CircID chr17:1464483|1464693
ORF Type ORF5
Protein Length 48
Nucleotide Length 144
Protein Sequence MMWVLWGSLALGVAVRHAEEGLPSWFCGNLPYDRGQVPSPVWASVFCS
Nucleotide Sequence ATGATGTGGGTTTTATGGGGCTCCCTGGCTCTGGGAGTGGCAGTGAGGCACGCTGAGGAAGGGCTGCCATCTTGGTTTTGTGGCAACCTGCCGTATGACCGTGGGCAAGTGCCTTCTCCTGTTTGGGCATCTGTCTTCTGCTCT
CircID chr17:1464483|1464693
ORF Type ORF6
Protein Length 30
Nucleotide Length 90
Protein Sequence MRKGCHLGFVATCRMTVGKCLLLFGHLSSA
Nucleotide Sequence CTGAGGAAGGGCTGCCATCTTGGTTTTGTGGCAACCTGCCGTATGACCGTGGGCAAGTGCCTTCTCCTGTTTGGGCATCTGTCTTCTGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab