CircRNA Information

General Information
circRNA Basic Information
CircID chr17:1465148|1465243
Strand +
CircType exon
Host Gene ENSG00000197879.13;
Algorism CIRI2;
Sequence CTTGTCTTTCTGTCTGTTTACCTGTCTCCCTGCCTGCCCATCTGCATCTTTTGCAGCCCACTCTGACTTCCATCTGGGGGCTGAGACCACCCTTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:1465148|1465243 hsa-miR-30a-5p 0 0 1
chr17:1465148|1465243 hsa-miR-30a-3p 0 0 1
chr17:1465148|1465243 hsa-miR-30d-5p 0 0 1
chr17:1465148|1465243 hsa-miR-30d-3p 0 0 1
chr17:1465148|1465243 hsa-miR-30b-5p 0 0 1
chr17:1465148|1465243 hsa-miR-30b-3p 0 0 1
chr17:1465148|1465243 hsa-miR-30e-5p 0 0 1
chr17:1465148|1465243 hsa-miR-30e-3p 0 0 1
chr17:1465148|1465243 hsa-miR-940 0 0 1
chr17:1465148|1465243 hsa-miR-1293 0 1 1
chr17:1465148|1465243 hsa-miR-1324 0 0 1
chr17:1465148|1465243 hsa-miR-361-3p 0 1 1
chr17:1465148|1465243 hsa-miR-1207-5p 1 1 1
chr17:1465148|1465243 hsa-miR-323-5p 0 0 1
chr17:1465148|1465243 hsa-miR-30c 0 0 1
chr17:1465148|1465243 hsa-miR-663a 1 0 0
chr17:1465148|1465243 hsa-miR-3141 1 0 0
chr17:1465148|1465243 hsa-miR-3147 1 0 0
chr17:1465148|1465243 hsa-miR-4298 1 0 0
chr17:1465148|1465243 hsa-miR-4270 1 1 0
chr17:1465148|1465243 hsa-miR-3943 0 1 0
chr17:1465148|1465243 hsa-miR-4481 0 1 0
chr17:1465148|1465243 hsa-miR-4483 0 1 0
chr17:1465148|1465243 hsa-miR-4498 1 0 0
chr17:1465148|1465243 hsa-miR-1587 1 0 0
chr17:1465148|1465243 hsa-miR-4644 1 0 0
chr17:1465148|1465243 hsa-miR-4656 1 0 0
chr17:1465148|1465243 hsa-miR-4673 1 0 0
chr17:1465148|1465243 hsa-miR-4688 1 0 0
chr17:1465148|1465243 hsa-miR-4692 1 1 0
chr17:1465148|1465243 hsa-miR-4706 1 0 0
chr17:1465148|1465243 hsa-miR-4739 1 0 0
chr17:1465148|1465243 hsa-miR-4741 1 0 0
chr17:1465148|1465243 hsa-miR-6860 1 0 0
chr17:1465148|1465243 hsa-miR-7150 1 0 0
chr17:1465148|1465243 hsa-miR-4433b-3p 1 0 0
chr17:1465148|1465243 hsa-miR-6861-5p 1 0 0
chr17:1465148|1465243 hsa-miR-3622a-5p 1 0 0
chr17:1465148|1465243 hsa-miR-4695-5p 1 0 0
chr17:1465148|1465243 hsa-miR-4722-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6806-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6871-5p 1 1 0
chr17:1465148|1465243 hsa-miR-6829-5p 0 1 0
chr17:1465148|1465243 hsa-miR-6798-5p 1 1 0
chr17:1465148|1465243 hsa-miR-6760-5p 1 1 0
chr17:1465148|1465243 hsa-miR-6810-5p 1 0 0
chr17:1465148|1465243 hsa-miR-1229-5p 1 0 0
chr17:1465148|1465243 hsa-miR-1908-5p 1 0 0
chr17:1465148|1465243 hsa-miR-1228-5p 1 0 0
chr17:1465148|1465243 hsa-miR-937-5p 1 0 0
chr17:1465148|1465243 hsa-miR-3162-5p 1 0 0
chr17:1465148|1465243 hsa-miR-7112-5p 1 0 0
chr17:1465148|1465243 hsa-miR-423-5p 1 0 0
chr17:1465148|1465243 hsa-miR-654-5p 0 1 0
chr17:1465148|1465243 hsa-miR-7113-5p 1 0 0
chr17:1465148|1465243 hsa-miR-4763-3p 1 0 0
chr17:1465148|1465243 hsa-miR-6816-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6870-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6893-5p 1 1 0
chr17:1465148|1465243 hsa-miR-6743-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6754-5p 1 1 0
chr17:1465148|1465243 hsa-miR-6756-5p 1 0 0
chr17:1465148|1465243 hsa-miR-1249-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6722-3p 1 1 0
chr17:1465148|1465243 hsa-miR-6808-5p 1 1 0
chr17:1465148|1465243 hsa-miR-6879-5p 1 0 0
chr17:1465148|1465243 hsa-miR-3620-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6836-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6862-5p 1 0 0
chr17:1465148|1465243 hsa-miR-1909-3p 1 0 0
chr17:1465148|1465243 hsa-miR-328-5p 1 0 0
chr17:1465148|1465243 hsa-miR-4749-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6738-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6777-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6794-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6848-5p 1 0 0
chr17:1465148|1465243 hsa-miR-3187-5p 1 0 0
chr17:1465148|1465243 hsa-miR-4436b-3p 1 0 0
chr17:1465148|1465243 hsa-miR-4758-5p 1 0 0
chr17:1465148|1465243 hsa-miR-10394-3p 1 0 0
chr17:1465148|1465243 hsa-miR-6511a-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6511b-5p 1 0 0
chr17:1465148|1465243 hsa-miR-4665-5p 1 0 0
chr17:1465148|1465243 hsa-miR-4716-3p 1 0 0
chr17:1465148|1465243 hsa-miR-6785-5p 1 0 0
chr17:1465148|1465243 hsa-miR-6848-3p 0 1 0
chr17:1465148|1465243 hsa-miR-548aj-5p 0 1 0
chr17:1465148|1465243 hsa-miR-548g-5p 0 1 0
chr17:1465148|1465243 hsa-miR-548x-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:1465148|1465243
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence LSFCLFTCLPACPSASFAAHSDFHLGAETTL
Nucleotide Sequence TTGTCTTTCTGTCTGTTTACCTGTCTCCCTGCCTGCCCATCTGCATCTTTTGCAGCCCACTCTGACTTCCATCTGGGGGCTGAGACCACCCTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab