CircRNA Information

General Information
circRNA Basic Information
CircID chr17:1470435|1470664
Strand -
CircType exon
Host Gene ENSG00000197879.13;
Algorism CIRI2;
Sequence CGCCGGATGGTCTGTGCCGCCCACTTCCTCTTGGCTGCCTTCCTCCGGCCCAGTGTTCCACGCCACCACGACTGGATGCAGATGGCTGTCGTGGAGACCACAGATGGCTGAACTCTATCTTCTTACCATGGTGGCCCCCCCTGGCCCCAGACCCCGCCCCTCCTGAACACCCATGGGCCCGCGAACCTGATCTCTTCACCCGGAGGAATTTCTGCCGCCAGTGAAAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:1470435|1470664 hsa-miR-141-5p 0 0 1
chr17:1470435|1470664 hsa-miR-141-3p 0 0 1
chr17:1470435|1470664 hsa-miR-200a-5p 0 0 1
chr17:1470435|1470664 hsa-miR-200a-3p 0 0 1
chr17:1470435|1470664 hsa-miR-609 0 0 1
chr17:1470435|1470664 hsa-miR-637 0 0 1
chr17:1470435|1470664 hsa-miR-324-5p 0 0 1
chr17:1470435|1470664 hsa-miR-423-5p 0 0 1
chr17:1470435|1470664 hsa-miR-1308 0 0 1
chr17:1470435|1470664 hsa-miR-663 0 0 1
chr17:1470435|1470664 hsa-miR-206 1 0 0
chr17:1470435|1470664 hsa-miR-608 1 0 0
chr17:1470435|1470664 hsa-miR-638 1 0 0
chr17:1470435|1470664 hsa-miR-663a 1 0 0
chr17:1470435|1470664 hsa-miR-762 1 1 0
chr17:1470435|1470664 hsa-miR-1268a 1 0 0
chr17:1470435|1470664 hsa-miR-3141 1 0 0
chr17:1470435|1470664 hsa-miR-3196 1 1 0
chr17:1470435|1470664 hsa-miR-4298 1 0 0
chr17:1470435|1470664 hsa-miR-3621 1 0 0
chr17:1470435|1470664 hsa-miR-3911 1 0 0
chr17:1470435|1470664 hsa-miR-3916 0 1 0
chr17:1470435|1470664 hsa-miR-1268b 1 0 0
chr17:1470435|1470664 hsa-miR-4437 1 0 0
chr17:1470435|1470664 hsa-miR-4440 0 1 0
chr17:1470435|1470664 hsa-miR-4466 1 0 0
chr17:1470435|1470664 hsa-miR-4488 1 0 0
chr17:1470435|1470664 hsa-miR-4651 1 0 0
chr17:1470435|1470664 hsa-miR-4654 1 0 0
chr17:1470435|1470664 hsa-miR-4689 1 0 0
chr17:1470435|1470664 hsa-miR-4706 1 0 0
chr17:1470435|1470664 hsa-miR-4734 1 0 0
chr17:1470435|1470664 hsa-miR-4739 1 0 0
chr17:1470435|1470664 hsa-miR-5194 1 0 0
chr17:1470435|1470664 hsa-miR-5787 1 0 0
chr17:1470435|1470664 hsa-miR-6081 1 0 0
chr17:1470435|1470664 hsa-miR-6125 1 0 0
chr17:1470435|1470664 hsa-miR-6127 1 1 0
chr17:1470435|1470664 hsa-miR-8089 1 0 0
chr17:1470435|1470664 hsa-miR-12115 1 0 0
chr17:1470435|1470664 hsa-miR-12118 0 1 0
chr17:1470435|1470664 hsa-miR-4433b-3p 1 0 0
chr17:1470435|1470664 hsa-miR-7155-5p 1 0 0
chr17:1470435|1470664 hsa-miR-4433a-3p 1 0 0
chr17:1470435|1470664 hsa-miR-7106-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6894-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6799-5p 1 0 0
chr17:1470435|1470664 hsa-miR-1227-5p 0 1 0
chr17:1470435|1470664 hsa-miR-6089 1 0 0
chr17:1470435|1470664 hsa-miR-6757-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6880-5p 1 0 0
chr17:1470435|1470664 hsa-miR-7847-3p 1 0 0
chr17:1470435|1470664 hsa-miR-4695-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6746-5p 1 0 0
chr17:1470435|1470664 hsa-miR-4722-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6741-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6759-5p 1 0 0
chr17:1470435|1470664 hsa-miR-197-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6871-5p 1 0 0
chr17:1470435|1470664 hsa-miR-3180-3p 1 1 0
chr17:1470435|1470664 hsa-miR-6748-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6772-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6793-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6796-5p 1 0 0
chr17:1470435|1470664 hsa-miR-3190-3p 1 0 0
chr17:1470435|1470664 hsa-miR-6805-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6827-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6798-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6782-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6850-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6786-5p 1 0 0
chr17:1470435|1470664 hsa-miR-5088-5p 1 0 0
chr17:1470435|1470664 hsa-miR-1226-5p 1 0 0
chr17:1470435|1470664 hsa-miR-4640-5p 1 1 0
chr17:1470435|1470664 hsa-miR-885-3p 1 0 0
chr17:1470435|1470664 hsa-miR-1908-5p 0 1 0
chr17:1470435|1470664 hsa-miR-1228-5p 1 1 0
chr17:1470435|1470664 hsa-miR-6771-5p 1 0 0
chr17:1470435|1470664 hsa-miR-3677-3p 1 0 0
chr17:1470435|1470664 hsa-miR-4717-3p 1 0 0
chr17:1470435|1470664 hsa-miR-6749-5p 1 0 0
chr17:1470435|1470664 hsa-miR-4743-5p 1 1 0
chr17:1470435|1470664 hsa-miR-149-3p 1 1 0
chr17:1470435|1470664 hsa-miR-6789-5p 1 0 0
chr17:1470435|1470664 hsa-miR-7156-3p 1 0 0
chr17:1470435|1470664 hsa-miR-6781-5p 1 1 0
chr17:1470435|1470664 hsa-miR-6877-5p 1 0 0
chr17:1470435|1470664 hsa-miR-744-5p 1 0 0
chr17:1470435|1470664 hsa-miR-605-3p 0 1 0
chr17:1470435|1470664 hsa-miR-2277-5p 1 0 0
chr17:1470435|1470664 hsa-miR-10400-5p 1 0 0
chr17:1470435|1470664 hsa-miR-1233-5p 1 0 0
chr17:1470435|1470664 hsa-miR-4763-3p 1 0 0
chr17:1470435|1470664 hsa-miR-6769b-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6787-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6812-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6816-5p 1 1 0
chr17:1470435|1470664 hsa-miR-5001-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6737-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6743-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6752-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6754-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6756-5p 1 1 0
chr17:1470435|1470664 hsa-miR-6815-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6819-5p 1 0 0
chr17:1470435|1470664 hsa-miR-1249-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6779-5p 0 1 0
chr17:1470435|1470664 hsa-miR-6797-5p 1 1 0
chr17:1470435|1470664 hsa-miR-6808-5p 1 0 0
chr17:1470435|1470664 hsa-miR-3620-5p 1 0 0
chr17:1470435|1470664 hsa-miR-5196-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6780b-5p 1 0 0
chr17:1470435|1470664 hsa-miR-10396a-5p 1 0 0
chr17:1470435|1470664 hsa-miR-10396b-5p 1 1 0
chr17:1470435|1470664 hsa-miR-1237-5p 1 0 0
chr17:1470435|1470664 hsa-miR-1909-3p 1 0 0
chr17:1470435|1470664 hsa-miR-328-5p 1 1 0
chr17:1470435|1470664 hsa-miR-4632-5p 1 0 0
chr17:1470435|1470664 hsa-miR-4649-5p 1 0 0
chr17:1470435|1470664 hsa-miR-4701-3p 1 0 0
chr17:1470435|1470664 hsa-miR-4725-3p 1 0 0
chr17:1470435|1470664 hsa-miR-4726-5p 1 1 0
chr17:1470435|1470664 hsa-miR-4745-5p 1 0 0
chr17:1470435|1470664 hsa-miR-4749-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6735-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6738-5p 1 0 0
chr17:1470435|1470664 hsa-miR-675-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6846-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6848-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6858-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6883-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6885-5p 0 1 0
chr17:1470435|1470664 hsa-miR-6773-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6736-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6876-5p 0 1 0
chr17:1470435|1470664 hsa-miR-6891-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6785-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6724-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6762-5p 1 1 0
chr17:1470435|1470664 hsa-miR-6529-5p 0 1 0
chr17:1470435|1470664 hsa-miR-6718-5p 1 0 0
chr17:1470435|1470664 hsa-miR-3059-5p 1 0 0
chr17:1470435|1470664 hsa-miR-6859-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:1470435|1470664
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MVCAAHFLLAAFLRPSVPRHHDWMQMAVVETTDG
Nucleotide Sequence ATGGTCTGTGCCGCCCACTTCCTCTTGGCTGCCTTCCTCCGGCCCAGTGTTCCACGCCACCACGACTGGATGCAGATGGCTGTCGTGGAGACCACAGATGGCTGA
CircID chr17:1470435|1470664
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MPSSGPVFHATTTGCRWLSWRPQMAELYLLTMVAPPGPRPRPS
Nucleotide Sequence CTGCCTTCCTCCGGCCCAGTGTTCCACGCCACCACGACTGGATGCAGATGGCTGTCGTGGAGACCACAGATGGCTGAACTCTATCTTCTTACCATGGTGGCCCCCCCTGGCCCCAGACCCCGCCCCTCCTGA
CircID chr17:1470435|1470664
ORF Type ORF3
Protein Length 70
Nucleotide Length 213
Protein Sequence MCRPLPLGCLPPAQCSTPPRLDADGCRGDHRWLNSIFLPWWPPLAPDPAPPEHPWAREPDLFTRRNFCRQ
Nucleotide Sequence CTGTGCCGCCCACTTCCTCTTGGCTGCCTTCCTCCGGCCCAGTGTTCCACGCCACCACGACTGGATGCAGATGGCTGTCGTGGAGACCACAGATGGCTGAACTCTATCTTCTTACCATGGTGGCCCCCCCTGGCCCCAGACCCCGCCCCTCCTGAACACCCATGGGCCCGCGAACCTGATCTCTTCACCCGGAGGAATTTCTGCCGCCAGTGA
CircID chr17:1470435|1470664
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MAAEIPPGEEIRFAGPWVFRRGGVWGQGGPPW
Nucleotide Sequence CTGGCGGCAGAAATTCCTCCGGGTGAAGAGATCAGGTTCGCGGGCCCATGGGTGTTCAGGAGGGGCGGGGTCTGGGGCCAGGGGGGGCCACCATGGTAA
CircID chr17:1470435|1470664
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MWSPRQPSASSRGGVEHWAGGRQPRGSGRHRPSG
Nucleotide Sequence CTGTGGTCTCCACGACAGCCATCTGCATCCAGTCGTGGTGGCGTGGAACACTGGGCCGGAGGAAGGCAGCCAAGAGGAAGTGGGCGGCACAGACCATCCGGC
CircID chr17:1470435|1470664
ORF Type ORF6
Protein Length 27
Nucleotide Length 81
Protein Sequence MHPVVVAWNTGPEEGSQEEVGGTDHPA
Nucleotide Sequence CTGCATCCAGTCGTGGTGGCGTGGAACACTGGGCCGGAGGAAGGCAGCCAAGAGGAAGTGGGCGGCACAGACCATCCGGCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab