CircNet

General Information

circRNA Basic Information

CircID	chr17:1479431\|1479705
Strand	-
CircType	exon
Host Gene	ENSG00000197879.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GACCTGCTGAGCATCGTGGCCAGCGTCCTTCATTTGGGCAACATCCACTTTGCTGCCAACGAGGAGAGCAATGCCCAGGTCACCACCGAGAACCAGCTCAAGTATCTGACCAGGCTCCTCAGCGTGGAAGGCTCGACGCTGCGAGAAGCCCTGACACACAGGAAGATCATCGCCAAGGGGGAGGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:1479431\|1479705	hsa-miR-26b-5p	0	0	1
chr17:1479431\|1479705	hsa-miR-26b-3p	0	0	1
chr17:1479431\|1479705	hsa-miR-197-5p	0	0	1
chr17:1479431\|1479705	hsa-miR-197-3p	0	0	1
chr17:1479431\|1479705	hsa-miR-205-5p	0	0	1
chr17:1479431\|1479705	hsa-miR-205-3p	0	0	1
chr17:1479431\|1479705	hsa-miR-370-5p	0	0	1
chr17:1479431\|1479705	hsa-miR-370-3p	0	0	1
chr17:1479431\|1479705	hsa-miR-579-5p	0	0	1
chr17:1479431\|1479705	hsa-miR-579-3p	0	0	1
chr17:1479431\|1479705	hsa-miR-589-5p	0	0	1
chr17:1479431\|1479705	hsa-miR-589-3p	0	0	1
chr17:1479431\|1479705	hsa-miR-765	0	0	1
chr17:1479431\|1479705	hsa-miR-1204	0	1	1
chr17:1479431\|1479705	hsa-miR-1297	0	0	1
chr17:1479431\|1479705	hsa-miR-1321	0	0	1
chr17:1479431\|1479705	hsa-miR-151-5p	0	0	1
chr17:1479431\|1479705	hsa-miR-220b	0	0	1
chr17:1479431\|1479705	hsa-miR-26a	0	0	1
chr17:1479431\|1479705	hsa-miR-365	0	0	1
chr17:1479431\|1479705	hsa-miR-611	0	1	0
chr17:1479431\|1479705	hsa-miR-1538	1	0	0
chr17:1479431\|1479705	hsa-miR-4441	0	1	0
chr17:1479431\|1479705	hsa-miR-4465	1	1	0
chr17:1479431\|1479705	hsa-miR-4663	0	1	0
chr17:1479431\|1479705	hsa-miR-4686	0	1	0
chr17:1479431\|1479705	hsa-miR-4739	0	1	0
chr17:1479431\|1479705	hsa-miR-5192	0	1	0
chr17:1479431\|1479705	hsa-miR-93-3p	0	1	0
chr17:1479431\|1479705	hsa-miR-4726-3p	0	1	0
chr17:1479431\|1479705	hsa-miR-6854-5p	1	0	0
chr17:1479431\|1479705	hsa-miR-3677-5p	0	1	0
chr17:1479431\|1479705	hsa-miR-3150b-3p	0	1	0
chr17:1479431\|1479705	hsa-miR-4436b-5p	0	1	0
chr17:1479431\|1479705	hsa-miR-181b-5p	0	1	0
chr17:1479431\|1479705	hsa-miR-1343-5p	0	1	0
chr17:1479431\|1479705	hsa-miR-151a-5p	0	1	0
chr17:1479431\|1479705	hsa-miR-181d-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:1479431\|1479705
ORF Type	ORF1
Protein Length	47
Nucleotide Length	141
Protein Sequence	MIFLCVRASRSVEPSTLRSLVRYLSWFSVVTWALLSSLAAKWMLPK*
Nucleotide Sequence	ATGATCTTCCTGTGTGTCAGGGCTTCTCGCAGCGTCGAGCCTTCCACGCTGAGGAGCCTGGTCAGATACTTGAGCTGGTTCTCGGTGGTGACCTGGGCATTGCTCTCCTCGTTGGCAGCAAAGTGGATGTTGCCCAAATGA

CircID	chr17:1479431\|1479705
ORF Type	ORF2
Protein Length	57
Nucleotide Length	171
Protein Sequence	VASVLHLGNIHFAANEESNAQVTTENQLKYLTRLLSVEGSTLREALTHRKIIAKGEE
Nucleotide Sequence	GTGGCCAGCGTCCTTCATTTGGGCAACATCCACTTTGCTGCCAACGAGGAGAGCAATGCCCAGGTCACCACCGAGAACCAGCTCAAGTATCTGACCAGGCTCCTCAGCGTGGAAGGCTCGACGCTGCGAGAAGCCCTGACACACAGGAAGATCATCGCCAAGGGGGAGGAG

CircID	chr17:1479431\|1479705
ORF Type	ORF1
Protein Length	32
Nucleotide Length	96
Protein Sequence	MVLGGDLGIALLVGSKVDVAQMKDAGHDAQQV
Nucleotide Sequence	CTGGTTCTCGGTGGTGACCTGGGCATTGCTCTCCTCGTTGGCAGCAAAGTGGATGTTGCCCAAATGAAGGACGCTGGCCACGATGCTCAGCAGGTC

CircID	chr17:1479431\|1479705
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MVRYLSWFSVVTWALLSSLAAKWMLPK
Nucleotide Sequence	CTGGTCAGATACTTGAGCTGGTTCTCGGTGGTGACCTGGGCATTGCTCTCCTCGTTGGCAGCAAAGTGGATGTTGCCCAAATGA

CircID	chr17:1479431\|1479705
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	MLSIVASVLHLGNIHFAANEESNAQVTTENQLKYLTREE
Nucleotide Sequence	CTGCTGAGCATCGTGGCCAGCGTCCTTCATTTGGGCAACATCCACTTTGCTGCCAACGAGGAGAGCAATGCCCAGGTCACCACCGAGAACCAGCTCAAGTATCTGACCAGGGAGGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:1479431\|1479705	FMR1	10	9	4
chr17:1479431\|1479705	NOP56	2	1	0
chr17:1479431\|1479705	ELAVL1	6	8	0
chr17:1479431\|1479705	SF3B4	0	2	0
chr17:1479431\|1479705	PUM2	1	0	0
chr17:1479431\|1479705	PRPF8	3	7	1
chr17:1479431\|1479705	RPS5	2	0	1
chr17:1479431\|1479705	UPF1	1	1	0
chr17:1479431\|1479705	TAF15	0	1	0
chr17:1479431\|1479705	CPSF7	1	1	0
chr17:1479431\|1479705	CPSF6	1	0	0
chr17:1479431\|1479705	CSTF2	0	1	0
chr17:1479431\|1479705	TROVE2	0	1	1
chr17:1479431\|1479705	SRSF7	2	3	0
chr17:1479431\|1479705	SRSF1	3	8	0
chr17:1479431\|1479705	NOP58	3	3	0
chr17:1479431\|1479705	SRSF3	0	1	0
chr17:1479431\|1479705	U2AF1	0	4	0
chr17:1479431\|1479705	U2AF2	22	22	0
chr17:1479431\|1479705	SRSF9	2	3	0
chr17:1479431\|1479705	DDX54	3	5	2
chr17:1479431\|1479705	HNRNPK	1	0	0
chr17:1479431\|1479705	HNRNPL	1	0	0
chr17:1479431\|1479705	CPSF1	0	1	0
chr17:1479431\|1479705	AUH	0	1	0
chr17:1479431\|1479705	FIP1L1	0	1	0
chr17:1479431\|1479705	PTBP1	3	6	0
chr17:1479431\|1479705	HNRNPC	28	25	1
chr17:1479431\|1479705	TRA2A	1	2	0
chr17:1479431\|1479705	HNRNPM	0	2	0
chr17:1479431\|1479705	ZNF184	1	4	0
chr17:1479431\|1479705	ACIN1	0	1	0
chr17:1479431\|1479705	DDX3X	1	1	0
chr17:1479431\|1479705	XRN2	0	1	0
chr17:1479431\|1479705	SMNDC1	0	1	0
chr17:1479431\|1479705	RBM10	3	5	0
chr17:1479431\|1479705	HNRNPA1	2	5	0
chr17:1479431\|1479705	LIN28B	2	14	2
chr17:1479431\|1479705	RANGAP1	0	4	0
chr17:1479431\|1479705	FXR1	1	5	2
chr17:1479431\|1479705	FXR2	4	4	2
chr17:1479431\|1479705	SND1	0	1	0
chr17:1479431\|1479705	DICER1	1	0	0
chr17:1479431\|1479705	IGF2BP3	0	5	0
chr17:1479431\|1479705	IGF2BP2	6	5	1
chr17:1479431\|1479705	HNRNPUL1	2	0	0
chr17:1479431\|1479705	TARDBP	0	1	1
chr17:1479431\|1479705	STAU1	12	10	0
chr17:1479431\|1479705	FBL	2	1	0
chr17:1479431\|1479705	BUD13	3	2	1
chr17:1479431\|1479705	CNBP	0	1	0
chr17:1479431\|1479705	SLTM	1	0	0
chr17:1479431\|1479705	RTCB	1	0	0
chr17:1479431\|1479705	CSTF2T	1	3	0
chr17:1479431\|1479705	BCCIP	0	1	0
chr17:1479431\|1479705	VIM	0	1	0
chr17:1479431\|1479705	TARBP2	1	3	0
chr17:1479431\|1479705	EIF4A3	5	9	4
chr17:1479431\|1479705	WDR33	0	1	0
chr17:1479431\|1479705	AIFM1	1	0	0
chr17:1479431\|1479705	ILF3	2	3	5
chr17:1479431\|1479705	AGO2	0	1	1

CircRNA Information