CircNet

General Information

circRNA Basic Information

CircID	chr17:16186554\|16198719
Strand	-
CircType	exon
Host Gene	ENSG00000141027.20;
Algorism	find_circ;CIRI2;CIRC
Sequence	GTGGTTTCCTAGAAACATGATTGTTTATTGGCATTGATCTCACAGTCTGGTGAGGACTTCTTTACTGATAATGTCAAGTTCAGGTTATCCTCCCAACCAAGGAGCATTCAGCACAGAACAAAGTCGTTATCCTCCTCACTCTGTCCAGTATACATTTCCCAACACCCGCCACCAGCAGGAGTTCGCAGTCCCTGATTATCGTTCCTCTCATCTTGAAGTGAGTCAGGCATCACAGCTTTTGCAGCAACAGCAGCAGCAACAGCTTCGAAGGCGACCTTCCTTGCTTTCAGAATTTCACCCAGGTTCTGACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:16186554\|16198719	hsa-miR-154-5p	0	1	1
chr17:16186554\|16198719	hsa-miR-150-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:16186554\|16198719
ORF Type	ORF1
Protein Length	80
Nucleotide Length	240
Protein Sequence	MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQEFAVPDYRSSHLEVSQASQLLQQQQQQQLRRRPSLLSEFHPGSD
Nucleotide Sequence	ATGTCAAGTTCAGGTTATCCTCCCAACCAAGGAGCATTCAGCACAGAACAAAGTCGTTATCCTCCTCACTCTGTCCAGTATACATTTCCCAACACCCGCCACCAGCAGGAGTTCGCAGTCCCTGATTATCGTTCCTCTCATCTTGAAGTGAGTCAGGCATCACAGCTTTTGCAGCAACAGCAGCAGCAACAGCTTCGAAGGCGACCTTCCTTGCTTTCAGAATTTCACCCAGGTTCTGAC

CircID	chr17:16186554\|16198719
ORF Type	ORF2
Protein Length	44
Nucleotide Length	132
Protein Sequence	MRGTIIRDCELLLVAGVGKCILDRVRRITTLFCAECSLVGRIT*
Nucleotide Sequence	ATGAGAGGAACGATAATCAGGGACTGCGAACTCCTGCTGGTGGCGGGTGTTGGGAAATGTATACTGGACAGAGTGAGGAGGATAACGACTTTGTTCTGTGCTGAATGCTCCTTGGTTGGGAGGATAACCTGA

CircID	chr17:16186554\|16198719
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MPDSLQDERNDNQGLRTPAGGGCWEMYTGQSEEDNDFVLC*
Nucleotide Sequence	ATGCCTGACTCACTTCAAGATGAGAGGAACGATAATCAGGGACTGCGAACTCCTGCTGGTGGCGGGTGTTGGGAAATGTATACTGGACAGAGTGAGGAGGATAACGACTTTGTTCTGTGCTGA

CircID	chr17:16186554\|16198719
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MLLGWEDNLNLTLSVKKSSPDCEINANKQSCF*
Nucleotide Sequence	ATGCTCCTTGGTTGGGAGGATAACCTGAACTTGACATTATCAGTAAAGAAGTCCTCACCAGACTGTGAGATCAATGCCAATAAACAATCATGTTTCTAG

CircID	chr17:16186554\|16198719
ORF Type	ORF5
Protein Length	56
Nucleotide Length	168
Protein Sequence	LALISQSGEDFFTDNVKFRLSSQPRSIQHRTKSLSSSLCPVYISQHPPPAGVRSP*
Nucleotide Sequence	TTGGCATTGATCTCACAGTCTGGTGAGGACTTCTTTACTGATAATGTCAAGTTCAGGTTATCCTCCCAACCAAGGAGCATTCAGCACAGAACAAAGTCGTTATCCTCCTCACTCTGTCCAGTATACATTTCCCAACACCCGCCACCAGCAGGAGTTCGCAGTCCCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:16186554\|16198719	U2AF2	14	17	0
chr17:16186554\|16198719	ELAVL1	8	19	1
chr17:16186554\|16198719	ELAVL3	0	2	0
chr17:16186554\|16198719	FAM120A	1	0	0
chr17:16186554\|16198719	CELF2	1	0	0
chr17:16186554\|16198719	PRPF8	0	1	0
chr17:16186554\|16198719	UPF1	0	1	0
chr17:16186554\|16198719	TNRC6A	0	1	0
chr17:16186554\|16198719	FMR1	0	1	1
chr17:16186554\|16198719	NUDT21	0	1	0
chr17:16186554\|16198719	TIA1	0	2	0
chr17:16186554\|16198719	CPSF3	0	1	0
chr17:16186554\|16198719	FUS	1	2	1
chr17:16186554\|16198719	WDR33	0	1	0
chr17:16186554\|16198719	SRSF7	0	0	1
chr17:16186554\|16198719	SRSF1	0	4	1
chr17:16186554\|16198719	NOP58	1	2	0
chr17:16186554\|16198719	SRSF3	0	1	0
chr17:16186554\|16198719	CSTF2	0	4	0
chr17:16186554\|16198719	NOP56	2	2	1
chr17:16186554\|16198719	DDX54	0	1	7
chr17:16186554\|16198719	RBM10	0	2	0
chr17:16186554\|16198719	HNRNPL	0	1	0
chr17:16186554\|16198719	HNRNPA2B1	0	2	0
chr17:16186554\|16198719	FIP1L1	1	3	0
chr17:16186554\|16198719	MBNL2	0	1	0
chr17:16186554\|16198719	HNRNPC	5	24	2
chr17:16186554\|16198719	HNRNPD	0	1	0
chr17:16186554\|16198719	TRA2A	0	0	1
chr17:16186554\|16198719	DDX3X	0	0	2
chr17:16186554\|16198719	ZC3H7B	0	1	0
chr17:16186554\|16198719	SMNDC1	0	1	0
chr17:16186554\|16198719	MSI2	0	0	1
chr17:16186554\|16198719	HNRNPA1	3	15	0
chr17:16186554\|16198719	LIN28B	0	2	0
chr17:16186554\|16198719	SND1	0	0	1
chr17:16186554\|16198719	IGF2BP1	0	1	7
chr17:16186554\|16198719	IGF2BP3	0	1	2
chr17:16186554\|16198719	IGF2BP2	0	4	6
chr17:16186554\|16198719	TARDBP	1	2	1
chr17:16186554\|16198719	YTHDC1	0	0	1
chr17:16186554\|16198719	RBFOX2	0	2	1
chr17:16186554\|16198719	DDX42	1	0	0
chr17:16186554\|16198719	CSTF2T	1	2	1
chr17:16186554\|16198719	YWHAG	0	1	1
chr17:16186554\|16198719	TIAL1	0	2	0
chr17:16186554\|16198719	ATXN2	0	1	0
chr17:16186554\|16198719	EWSR1	0	1	0
chr17:16186554\|16198719	EIF4A3	0	2	7
chr17:16186554\|16198719	FBL	0	0	1

CircRNA Information