CircRNA Information

General Information
circRNA Basic Information
CircID chr17:1650667|1650813
Strand +
CircType exon
Host Gene ENSG00000174231.15;
Algorism CIRI2;
Sequence CTGTATGCCTGACCGTTTCCCTGCCTCCTGCTTCAGCCTCCCGAGGCCGAAGCCTCAGCCCCTCCAGACAGGCCGCTGACATTCAGCAGTTTGGCCTCTTTCCCTCTGTCTGTGCTTGTGTTGTTGACCTCCTGATGGCTTGTCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:1650667|1650813 hsa-miR-505-5p 0 0 1
chr17:1650667|1650813 hsa-miR-505-3p 0 0 1
chr17:1650667|1650813 hsa-miR-553 0 0 1
chr17:1650667|1650813 hsa-miR-583 0 0 1
chr17:1650667|1650813 hsa-miR-650 1 1 1
chr17:1650667|1650813 hsa-miR-940 0 0 1
chr17:1650667|1650813 hsa-miR-1231 0 1 1
chr17:1650667|1650813 hsa-miR-1234-3p 0 0 1
chr17:1650667|1650813 hsa-miR-1324 0 0 1
chr17:1650667|1650813 hsa-miR-1827 0 0 1
chr17:1650667|1650813 hsa-miR-1234 0 0 1
chr17:1650667|1650813 hsa-miR-485-5p 0 0 1
chr17:1650667|1650813 hsa-miR-423-5p 1 1 1
chr17:1650667|1650813 hsa-miR-1207-5p 1 1 1
chr17:1650667|1650813 hsa-miR-516b 0 0 1
chr17:1650667|1650813 hsa-miR-923 0 0 1
chr17:1650667|1650813 hsa-miR-762 1 1 0
chr17:1650667|1650813 hsa-miR-298 1 0 0
chr17:1650667|1650813 hsa-miR-665 1 0 0
chr17:1650667|1650813 hsa-miR-2110 1 0 0
chr17:1650667|1650813 hsa-miR-3185 1 0 0
chr17:1650667|1650813 hsa-miR-3188 1 0 0
chr17:1650667|1650813 hsa-miR-4269 1 1 0
chr17:1650667|1650813 hsa-miR-4270 1 0 0
chr17:1650667|1650813 hsa-miR-3612 1 0 0
chr17:1650667|1650813 hsa-miR-3929 0 1 0
chr17:1650667|1650813 hsa-miR-3135b 1 0 0
chr17:1650667|1650813 hsa-miR-4656 1 1 0
chr17:1650667|1650813 hsa-miR-4673 1 0 0
chr17:1650667|1650813 hsa-miR-4706 1 0 0
chr17:1650667|1650813 hsa-miR-4739 1 0 0
chr17:1650667|1650813 hsa-miR-4741 1 0 0
chr17:1650667|1650813 hsa-miR-5090 1 0 0
chr17:1650667|1650813 hsa-miR-5787 1 0 0
chr17:1650667|1650813 hsa-miR-6085 0 1 0
chr17:1650667|1650813 hsa-miR-6086 1 0 0
chr17:1650667|1650813 hsa-miR-6090 1 0 0
chr17:1650667|1650813 hsa-miR-6125 1 0 0
chr17:1650667|1650813 hsa-miR-6133 1 0 0
chr17:1650667|1650813 hsa-miR-6165 1 1 0
chr17:1650667|1650813 hsa-miR-7150 1 0 0
chr17:1650667|1650813 hsa-miR-8054 1 0 0
chr17:1650667|1650813 hsa-miR-8072 1 0 0
chr17:1650667|1650813 hsa-miR-8085 1 0 0
chr17:1650667|1650813 hsa-miR-12118 1 0 0
chr17:1650667|1650813 hsa-miR-125b-2-3p 1 0 0
chr17:1650667|1650813 hsa-miR-214-5p 0 1 0
chr17:1650667|1650813 hsa-miR-92a-1-5p 1 0 0
chr17:1650667|1650813 hsa-miR-4433a-3p 1 0 0
chr17:1650667|1650813 hsa-miR-6765-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6894-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6799-5p 1 0 0
chr17:1650667|1650813 hsa-miR-3622a-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6089 1 0 0
chr17:1650667|1650813 hsa-miR-3192-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6873-5p 0 1 0
chr17:1650667|1650813 hsa-miR-4695-5p 1 1 0
chr17:1650667|1650813 hsa-miR-4722-5p 1 1 0
chr17:1650667|1650813 hsa-miR-7160-5p 0 1 0
chr17:1650667|1650813 hsa-miR-6721-5p 1 0 0
chr17:1650667|1650813 hsa-miR-1292-5p 0 1 0
chr17:1650667|1650813 hsa-miR-3180-3p 1 0 0
chr17:1650667|1650813 hsa-miR-185-3p 0 1 0
chr17:1650667|1650813 hsa-miR-6798-5p 1 0 0
chr17:1650667|1650813 hsa-miR-3126-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6760-5p 1 1 0
chr17:1650667|1650813 hsa-miR-2467-3p 1 1 0
chr17:1650667|1650813 hsa-miR-6874-5p 1 0 0
chr17:1650667|1650813 hsa-miR-3194-5p 1 0 0
chr17:1650667|1650813 hsa-miR-1908-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6771-5p 1 1 0
chr17:1650667|1650813 hsa-miR-149-3p 1 0 0
chr17:1650667|1650813 hsa-miR-5584-5p 0 1 0
chr17:1650667|1650813 hsa-miR-4776-5p 1 0 0
chr17:1650667|1650813 hsa-miR-7112-5p 1 0 0
chr17:1650667|1650813 hsa-let-7e-5p 1 0 0
chr17:1650667|1650813 hsa-miR-4529-5p 0 1 0
chr17:1650667|1650813 hsa-miR-6792-5p 1 0 0
chr17:1650667|1650813 hsa-miR-4649-3p 0 1 0
chr17:1650667|1650813 hsa-miR-6767-5p 1 0 0
chr17:1650667|1650813 hsa-miR-513b-3p 0 1 0
chr17:1650667|1650813 hsa-miR-10400-5p 1 0 0
chr17:1650667|1650813 hsa-miR-1233-5p 1 0 0
chr17:1650667|1650813 hsa-miR-4763-3p 1 1 0
chr17:1650667|1650813 hsa-miR-6778-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6787-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6893-5p 1 1 0
chr17:1650667|1650813 hsa-miR-6726-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6743-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6754-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6756-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6813-5p 1 1 0
chr17:1650667|1650813 hsa-miR-6851-5p 1 0 0
chr17:1650667|1650813 hsa-miR-7107-5p 1 1 0
chr17:1650667|1650813 hsa-miR-11181-3p 1 0 0
chr17:1650667|1650813 hsa-miR-1249-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6722-3p 1 0 0
chr17:1650667|1650813 hsa-miR-6779-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6797-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6808-5p 1 1 0
chr17:1650667|1650813 hsa-miR-6879-5p 1 0 0
chr17:1650667|1650813 hsa-miR-7111-5p 1 0 0
chr17:1650667|1650813 hsa-miR-4728-5p 1 0 0
chr17:1650667|1650813 hsa-miR-5196-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6836-5p 1 0 0
chr17:1650667|1650813 hsa-miR-10396b-5p 1 0 0
chr17:1650667|1650813 hsa-miR-328-5p 1 0 0
chr17:1650667|1650813 hsa-miR-449c-5p 1 0 0
chr17:1650667|1650813 hsa-miR-4725-3p 1 0 0
chr17:1650667|1650813 hsa-miR-4749-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6846-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6848-5p 1 1 0
chr17:1650667|1650813 hsa-miR-6858-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6885-5p 1 0 0
chr17:1650667|1650813 hsa-miR-939-5p 1 0 0
chr17:1650667|1650813 hsa-miR-1910-3p 1 0 0
chr17:1650667|1650813 hsa-miR-4633-3p 1 0 0
chr17:1650667|1650813 hsa-miR-6511a-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6739-5p 0 1 0
chr17:1650667|1650813 hsa-miR-4747-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6750-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6762-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6884-5p 0 1 0
chr17:1650667|1650813 hsa-miR-3619-5p 1 0 0
chr17:1650667|1650813 hsa-miR-6733-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:1650667|1650813
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MLQPPEAEASAPPDRPLTFSSLASFPLSVLVLLTS
Nucleotide Sequence CTGCTTCAGCCTCCCGAGGCCGAAGCCTCAGCCCCTCCAGACAGGCCGCTGACATTCAGCAGTTTGGCCTCTTTCCCTCTGTCTGTGCTTGTGTTGTTGACCTCCTGA
CircID chr17:1650667|1650813
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MTVSLPPASASRGRSLSPSRQAADIQQFGLFPSVCACVVDLLMACH
Nucleotide Sequence CTGACCGTTTCCCTGCCTCCTGCTTCAGCCTCCCGAGGCCGAAGCCTCAGCCCCTCCAGACAGGCCGCTGACATTCAGCAGTTTGGCCTCTTTCCCTCTGTCTGTGCTTGTGTTGTTGACCTCCTGATGGCTTGTCAT
CircID chr17:1650667|1650813
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MTSHQEVNNTSTDRGKEAKLLNVSGLSGGAEASASGG
Nucleotide Sequence ATGACAAGCCATCAGGAGGTCAACAACACAAGCACAGACAGAGGGAAAGAGGCCAAACTGCTGAATGTCAGCGGCCTGTCTGGAGGGGCTGAGGCTTCGGCCTCGGGAGGCTGA
CircID chr17:1650667|1650813
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MSAACLEGLRLRPREAEAGGRETVRHT
Nucleotide Sequence ATGTCAGCGGCCTGTCTGGAGGGGCTGAGGCTTCGGCCTCGGGAGGCTGAAGCAGGAGGCAGGGAAACGGTCAGGCATACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab