CircRNA Information

General Information
circRNA Basic Information
CircID chr17:1651414|1651671
Strand -
CircType exon
Host Gene ENSG00000174231.15;
Algorism CIRI2;
Sequence CTGCATGTGATGATAATGGTCTTCTCGCCATCCCAAGATGGGTTGTCAGCCATGATCTTGGCATGGGTGGTGACATCCTGGGGTGATAACTGCGGGGACTCATTGGGCTGAGTGTGGATCCAACCTAAGGGTTCCATCTCCTATAGGTAAAGAGGAGTACAGAGCTGAATCCCATCCACAGACAGGAATCGCACCAGCTTTTCCACACTCCCAGGCTCCATCACTCCCCATTACCTTGAGGTACTCATGCTGGGGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:1651414|1651671 hsa-miR-197-5p 0 0 1
chr17:1651414|1651671 hsa-miR-197-3p 0 0 1
chr17:1651414|1651671 hsa-miR-122-5p 0 0 1
chr17:1651414|1651671 hsa-miR-122-3p 0 0 1
chr17:1651414|1651671 hsa-miR-320a-5p 0 0 1
chr17:1651414|1651671 hsa-miR-320a-3p 0 0 1
chr17:1651414|1651671 hsa-miR-635 0 0 1
chr17:1651414|1651671 hsa-miR-661 0 1 1
chr17:1651414|1651671 hsa-miR-675-5p 0 0 1
chr17:1651414|1651671 hsa-miR-675-3p 0 0 1
chr17:1651414|1651671 hsa-miR-939-5p 0 0 1
chr17:1651414|1651671 hsa-miR-939-3p 0 0 1
chr17:1651414|1651671 hsa-miR-1253 0 0 1
chr17:1651414|1651671 hsa-miR-1265 0 1 1
chr17:1651414|1651671 hsa-miR-512-5p 0 1 1
chr17:1651414|1651671 hsa-miR-574-5p 0 0 1
chr17:1651414|1651671 hsa-miR-338-3p 0 1 1
chr17:1651414|1651671 hsa-miR-324-3p 0 0 1
chr17:1651414|1651671 hsa-miR-769-3p 0 0 1
chr17:1651414|1651671 hsa-miR-320b 0 0 1
chr17:1651414|1651671 hsa-miR-320c 0 0 1
chr17:1651414|1651671 hsa-miR-320d 0 0 1
chr17:1651414|1651671 hsa-miR-450b-3p 0 0 1
chr17:1651414|1651671 hsa-miR-220b 0 0 1
chr17:1651414|1651671 hsa-miR-138 0 0 1
chr17:1651414|1651671 hsa-miR-549 0 0 1
chr17:1651414|1651671 hsa-miR-4421 1 1 0
chr17:1651414|1651671 hsa-miR-4641 0 1 0
chr17:1651414|1651671 hsa-miR-4658 1 0 0
chr17:1651414|1651671 hsa-miR-5092 0 1 0
chr17:1651414|1651671 hsa-miR-5685 1 1 0
chr17:1651414|1651671 hsa-miR-5694 0 1 0
chr17:1651414|1651671 hsa-miR-6090 1 0 0
chr17:1651414|1651671 hsa-miR-8082 1 1 0
chr17:1651414|1651671 hsa-miR-12115 1 0 0
chr17:1651414|1651671 hsa-miR-6747-5p 1 1 0
chr17:1651414|1651671 hsa-miR-3150a-3p 0 1 0
chr17:1651414|1651671 hsa-miR-6825-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6728-5p 0 1 0
chr17:1651414|1651671 hsa-miR-7114-5p 1 1 0
chr17:1651414|1651671 hsa-miR-3192-5p 0 1 0
chr17:1651414|1651671 hsa-miR-6759-5p 1 0 0
chr17:1651414|1651671 hsa-miR-3189-5p 1 0 0
chr17:1651414|1651671 hsa-miR-101-5p 0 1 0
chr17:1651414|1651671 hsa-miR-6748-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6732-5p 1 0 0
chr17:1651414|1651671 hsa-miR-23a-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6740-5p 1 1 0
chr17:1651414|1651671 hsa-miR-4640-5p 1 0 0
chr17:1651414|1651671 hsa-miR-3691-5p 0 1 0
chr17:1651414|1651671 hsa-miR-6749-5p 1 0 0
chr17:1651414|1651671 hsa-miR-3162-5p 1 0 0
chr17:1651414|1651671 hsa-miR-1225-5p 1 0 0
chr17:1651414|1651671 hsa-miR-3120-5p 0 1 0
chr17:1651414|1651671 hsa-miR-4742-3p 0 1 0
chr17:1651414|1651671 hsa-miR-3681-5p 1 1 0
chr17:1651414|1651671 hsa-miR-4661-3p 1 0 0
chr17:1651414|1651671 hsa-miR-339-3p 1 0 0
chr17:1651414|1651671 hsa-miR-508-5p 0 1 0
chr17:1651414|1651671 hsa-miR-1288-5p 0 1 0
chr17:1651414|1651671 hsa-miR-1911-5p 0 1 0
chr17:1651414|1651671 hsa-miR-6769b-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6752-5p 1 1 0
chr17:1651414|1651671 hsa-miR-6756-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6803-5p 1 0 0
chr17:1651414|1651671 hsa-miR-7107-5p 1 0 0
chr17:1651414|1651671 hsa-miR-7110-5p 1 0 0
chr17:1651414|1651671 hsa-miR-10401-5p 0 1 0
chr17:1651414|1651671 hsa-miR-6751-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6763-5p 1 1 0
chr17:1651414|1651671 hsa-miR-6846-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6848-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6889-5p 1 0 0
chr17:1651414|1651671 hsa-miR-4769-5p 0 1 0
chr17:1651414|1651671 hsa-miR-1199-5p 1 0 0
chr17:1651414|1651671 hsa-miR-6766-5p 0 1 0
chr17:1651414|1651671 hsa-miR-6790-5p 1 0 0
chr17:1651414|1651671 hsa-miR-550a-5p 1 0 0
chr17:1651414|1651671 hsa-miR-3059-5p 0 1 0
chr17:1651414|1651671 hsa-miR-4690-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:1651414|1651671
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence LHVMIMVFSPSQDGLSAMILAWVVTSWGDNCGDSLG
Nucleotide Sequence CTGCATGTGATGATAATGGTCTTCTCGCCATCCCAAGATGGGTTGTCAGCCATGATCTTGGCATGGGTGGTGACATCCTGGGGTGATAACTGCGGGGACTCATTGGGCTGA
CircID chr17:1651414|1651671
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence LPQHEYLKVMGSDGAWECGKAGAIPVCGWDSALYSSLPIGDGTLRLDPHSAQ
Nucleotide Sequence CTGCCCCAGCATGAGTACCTCAAGGTAATGGGGAGTGATGGAGCCTGGGAGTGTGGAAAAGCTGGTGCGATTCCTGTCTGTGGATGGGATTCAGCTCTGTACTCCTCTTTACCTATAGGAGATGGAACCCTTAGGTTGGATCCACACTCAGCCCAATGA
CircID chr17:1651414|1651671
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MEPGSVEKLVRFLSVDGIQLCTPLYL
Nucleotide Sequence ATGGAGCCTGGGAGTGTGGAAAAGCTGGTGCGATTCCTGTCTGTGGATGGGATTCAGCTCTGTACTCCTCTTTACCTATAG
CircID chr17:1651414|1651671
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITC
Nucleotide Sequence ATGGAACCCTTAGGTTGGATCCACACTCAGCCCAATGAGTCCCCGCAGTTATCACCCCAGGATGTCACCACCCATGCCAAGATCATGGCTGACAACCCATCTTGGGATGGCGAGAAGACCATTATCATCACATGC
CircID chr17:1651414|1651671
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MGVWKSWCDSCLWMGFSSVLLFTYRRWNP
Nucleotide Sequence CTGGGAGTGTGGAAAAGCTGGTGCGATTCCTGTCTGTGGATGGGATTCAGCTCTGTACTCCTCTTTACCTATAGGAGATGGAACCCTTAG
CircID chr17:1651414|1651671
ORF Type ORF6
Protein Length 34
Nucleotide Length 102
Protein Sequence MSPRSYHPRMSPPMPRSWLTTHLGMARRPLSSHA
Nucleotide Sequence ATGAGTCCCCGCAGTTATCACCCCAGGATGTCACCACCCATGCCAAGATCATGGCTGACAACCCATCTTGGGATGGCGAGAAGACCATTATCATCACATGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab