CircRNA Information

General Information
circRNA Basic Information
CircID chr17:1726923|1727099
Strand +
CircType exon
Host Gene ENSG00000167716.17;
Algorism CIRI2;
Sequence CCTCCCCAGGGTCTGCCCCAGCAGCTTTATTCCTGCGGCCTGGACGGGAGGCTGAGGCCACTGAGAAAGAGAGAAGTCCAGGGGACGCTTGACTGGAGGAGCCCAGCTGGTCACCTGCTTTCCCAGCAAGGGAAATGGAATCCAGAGCTTCTGTGGCCTGTTCCAAGTCGTCTTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:1726923|1727099 hsa-miR-204-5p 0 0 1
chr17:1726923|1727099 hsa-miR-204-3p 0 0 1
chr17:1726923|1727099 hsa-miR-211-5p 0 0 1
chr17:1726923|1727099 hsa-miR-211-3p 0 0 1
chr17:1726923|1727099 hsa-miR-320a-5p 0 0 1
chr17:1726923|1727099 hsa-miR-320a-3p 0 0 1
chr17:1726923|1727099 hsa-miR-422a 0 0 1
chr17:1726923|1727099 hsa-miR-504-5p 0 0 1
chr17:1726923|1727099 hsa-miR-504-3p 0 0 1
chr17:1726923|1727099 hsa-miR-623 1 1 1
chr17:1726923|1727099 hsa-miR-890 0 1 1
chr17:1726923|1727099 hsa-miR-939-5p 0 0 1
chr17:1726923|1727099 hsa-miR-939-3p 0 0 1
chr17:1726923|1727099 hsa-miR-942-5p 0 0 1
chr17:1726923|1727099 hsa-miR-942-3p 0 0 1
chr17:1726923|1727099 hsa-miR-1247-5p 0 0 1
chr17:1726923|1727099 hsa-miR-1247-3p 0 0 1
chr17:1726923|1727099 hsa-miR-1253 0 0 1
chr17:1726923|1727099 hsa-miR-125a-3p 0 0 1
chr17:1726923|1727099 hsa-miR-486-3p 0 1 1
chr17:1726923|1727099 hsa-miR-1207-3p 0 0 1
chr17:1726923|1727099 hsa-miR-331-3p 0 1 1
chr17:1726923|1727099 hsa-miR-320b 0 0 1
chr17:1726923|1727099 hsa-miR-320c 0 0 1
chr17:1726923|1727099 hsa-miR-320d 0 0 1
chr17:1726923|1727099 hsa-miR-378 0 0 1
chr17:1726923|1727099 hsa-miR-1295a 1 0 0
chr17:1726923|1727099 hsa-miR-3153 0 1 0
chr17:1726923|1727099 hsa-miR-4308 0 1 0
chr17:1726923|1727099 hsa-miR-4268 0 1 0
chr17:1726923|1727099 hsa-miR-4292 1 0 0
chr17:1726923|1727099 hsa-miR-3909 1 0 0
chr17:1726923|1727099 hsa-miR-378g 0 1 0
chr17:1726923|1727099 hsa-miR-5787 1 0 0
chr17:1726923|1727099 hsa-miR-8058 0 1 0
chr17:1726923|1727099 hsa-miR-8078 1 0 0
chr17:1726923|1727099 hsa-miR-8089 0 1 0
chr17:1726923|1727099 hsa-miR-370-3p 1 1 0
chr17:1726923|1727099 hsa-miR-3677-5p 0 1 0
chr17:1726923|1727099 hsa-miR-6806-5p 1 0 0
chr17:1726923|1727099 hsa-miR-6873-3p 0 1 0
chr17:1726923|1727099 hsa-miR-432-5p 0 1 0
chr17:1726923|1727099 hsa-miR-3180-3p 0 1 0
chr17:1726923|1727099 hsa-miR-4753-3p 1 1 0
chr17:1726923|1727099 hsa-miR-4690-5p 1 0 0
chr17:1726923|1727099 hsa-miR-6878-3p 0 1 0
chr17:1726923|1727099 hsa-miR-4638-3p 1 0 0
chr17:1726923|1727099 hsa-miR-3925-3p 0 1 0
chr17:1726923|1727099 hsa-miR-6877-5p 1 0 0
chr17:1726923|1727099 hsa-miR-1295b-3p 1 1 0
chr17:1726923|1727099 hsa-miR-6826-3p 1 0 0
chr17:1726923|1727099 hsa-miR-4717-5p 0 1 0
chr17:1726923|1727099 hsa-miR-4482-3p 1 0 0
chr17:1726923|1727099 hsa-miR-1207-5p 1 0 0
chr17:1726923|1727099 hsa-miR-4726-5p 1 0 0
chr17:1726923|1727099 hsa-miR-6511b-5p 1 0 0
chr17:1726923|1727099 hsa-miR-4646-5p 0 1 0
chr17:1726923|1727099 hsa-miR-4667-5p 0 1 0
chr17:1726923|1727099 hsa-miR-6791-5p 1 0 0
chr17:1726923|1727099 hsa-miR-5009-5p 0 1 0
chr17:1726923|1727099 hsa-miR-6829-3p 1 0 0
chr17:1726923|1727099 hsa-miR-10400-3p 0 1 0
chr17:1726923|1727099 hsa-miR-3928-5p 0 1 0
chr17:1726923|1727099 hsa-miR-4691-5p 1 0 0
chr17:1726923|1727099 hsa-miR-4768-5p 0 1 0
chr17:1726923|1727099 hsa-miR-6806-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:1726923|1727099
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence MPQQLYSCGLDGRLRPLRKREVQGTLDWRSPAGHLLSQQGKWNPELLWPVPSRLL
Nucleotide Sequence CTGCCCCAGCAGCTTTATTCCTGCGGCCTGGACGGGAGGCTGAGGCCACTGAGAAAGAGAGAAGTCCAGGGGACGCTTGACTGGAGGAGCCCAGCTGGTCACCTGCTTTCCCAGCAAGGGAAATGGAATCCAGAGCTTCTGTGGCCTGTTCCAAGTCGTCTTCTC

CircID chr17:1726923|1727099
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MTGGAQLVTCFPSKGNGIQSFCGLFQVVF
Nucleotide Sequence TTGACTGGAGGAGCCCAGCTGGTCACCTGCTTTCCCAGCAAGGGAAATGGAATCCAGAGCTTCTGTGGCCTGTTCCAAGTCGTCTTC

CircID chr17:1726923|1727099
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MEEPSWSPAFPAREMESRASVACSKSSS
Nucleotide Sequence CTGGAGGAGCCCAGCTGGTCACCTGCTTTCCCAGCAAGGGAAATGGAATCCAGAGCTTCTGTGGCCTGTTCCAAGTCGTCTTCT

CircID chr17:1726923|1727099
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MLGKQVTSWAPPVKRPLDFSLSQWPQPPVQAAGIKLLGQTLGR
Nucleotide Sequence TTGCTGGGAAAGCAGGTGACCAGCTGGGCTCCTCCAGTCAAGCGTCCCCTGGACTTCTCTCTTTCTCAGTGGCCTCAGCCTCCCGTCCAGGCCGCAGGAATAAAGCTGCTGGGGCAGACCCTGGGGAGG

CircID chr17:1726923|1727099
ORF Type ORF5
Protein Length 55
Nucleotide Length 165
Protein Sequence MEQATEALDSISLAGKAGDQLGSSSQASPGLLSFSVASASRPGRRNKAAGADPGE
Nucleotide Sequence TTGGAACAGGCCACAGAAGCTCTGGATTCCATTTCCCTTGCTGGGAAAGCAGGTGACCAGCTGGGCTCCTCCAGTCAAGCGTCCCCTGGACTTCTCTCTTTCTCAGTGGCCTCAGCCTCCCGTCCAGGCCGCAGGAATAAAGCTGCTGGGGCAGACCCTGGGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites