CircRNA Information

General Information
circRNA Basic Information
CircID chr17:1729927|1730085
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTCCCTCTGGCCTCTCTTCCCTCCACTCCCTCGGTCTCGCCATAACGGCCTTTCCCTGCTTCTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTGAGACAGAGTCTCGCACTGTTGCCCAGGCTGGAGTGCAATGGCACAATCTCAGTTCATTGCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:1729927|1730085 hsa-miR-25-5p 0 0 1
chr17:1729927|1730085 hsa-miR-25-3p 0 0 1
chr17:1729927|1730085 hsa-miR-32-5p 0 0 1
chr17:1729927|1730085 hsa-miR-32-3p 0 0 1
chr17:1729927|1730085 hsa-miR-363-5p 0 0 1
chr17:1729927|1730085 hsa-miR-363-3p 0 0 1
chr17:1729927|1730085 hsa-miR-367-5p 0 0 1
chr17:1729927|1730085 hsa-miR-367-3p 0 0 1
chr17:1729927|1730085 hsa-miR-92b-5p 0 0 1
chr17:1729927|1730085 hsa-miR-92b-3p 0 0 1
chr17:1729927|1730085 hsa-miR-612 0 1 1
chr17:1729927|1730085 hsa-miR-652-5p 0 0 1
chr17:1729927|1730085 hsa-miR-652-3p 0 0 1
chr17:1729927|1730085 hsa-miR-661 0 0 1
chr17:1729927|1730085 hsa-miR-766-5p 0 0 1
chr17:1729927|1730085 hsa-miR-766-3p 0 0 1
chr17:1729927|1730085 hsa-miR-1227-5p 0 0 1
chr17:1729927|1730085 hsa-miR-1227-3p 0 0 1
chr17:1729927|1730085 hsa-miR-508-5p 0 1 1
chr17:1729927|1730085 hsa-miR-371-5p 0 0 1
chr17:1729927|1730085 hsa-miR-1285 0 0 1
chr17:1729927|1730085 hsa-miR-92a 0 0 1
chr17:1729927|1730085 hsa-miR-608 1 0 0
chr17:1729927|1730085 hsa-miR-658 1 0 0
chr17:1729927|1730085 hsa-miR-298 1 0 0
chr17:1729927|1730085 hsa-miR-1253 1 0 0
chr17:1729927|1730085 hsa-miR-1268a 1 0 0
chr17:1729927|1730085 hsa-miR-711 1 0 0
chr17:1729927|1730085 hsa-miR-3125 1 0 0
chr17:1729927|1730085 hsa-miR-3132 1 0 0
chr17:1729927|1730085 hsa-miR-3141 1 0 0
chr17:1729927|1730085 hsa-miR-3154 1 1 0
chr17:1729927|1730085 hsa-miR-3175 1 0 0
chr17:1729927|1730085 hsa-miR-3185 1 0 0
chr17:1729927|1730085 hsa-miR-3197 1 0 0
chr17:1729927|1730085 hsa-miR-4270 1 0 0
chr17:1729927|1730085 hsa-miR-4271 1 0 0
chr17:1729927|1730085 hsa-miR-3916 1 0 0
chr17:1729927|1730085 hsa-miR-1268b 1 0 0
chr17:1729927|1730085 hsa-miR-4428 1 1 0
chr17:1729927|1730085 hsa-miR-4499 1 0 0
chr17:1729927|1730085 hsa-miR-4510 1 1 0
chr17:1729927|1730085 hsa-miR-4513 1 0 0
chr17:1729927|1730085 hsa-miR-4516 1 0 0
chr17:1729927|1730085 hsa-miR-4533 1 0 0
chr17:1729927|1730085 hsa-miR-4534 1 0 0
chr17:1729927|1730085 hsa-miR-4634 1 0 0
chr17:1729927|1730085 hsa-miR-4651 1 0 0
chr17:1729927|1730085 hsa-miR-4689 1 0 0
chr17:1729927|1730085 hsa-miR-4706 1 0 0
chr17:1729927|1730085 hsa-miR-4739 1 1 0
chr17:1729927|1730085 hsa-miR-4784 1 0 0
chr17:1729927|1730085 hsa-miR-5684 1 1 0
chr17:1729927|1730085 hsa-miR-5698 1 0 0
chr17:1729927|1730085 hsa-miR-5703 1 0 0
chr17:1729927|1730085 hsa-miR-6081 1 0 0
chr17:1729927|1730085 hsa-miR-6085 1 0 0
chr17:1729927|1730085 hsa-miR-6088 1 0 0
chr17:1729927|1730085 hsa-miR-6090 1 0 0
chr17:1729927|1730085 hsa-miR-6127 1 1 0
chr17:1729927|1730085 hsa-miR-6129 1 1 0
chr17:1729927|1730085 hsa-miR-6130 1 1 0
chr17:1729927|1730085 hsa-miR-6133 1 0 0
chr17:1729927|1730085 hsa-miR-6165 1 0 0
chr17:1729927|1730085 hsa-miR-6745 1 0 0
chr17:1729927|1730085 hsa-miR-6860 0 1 0
chr17:1729927|1730085 hsa-miR-7703 0 1 0
chr17:1729927|1730085 hsa-miR-8074 1 1 0
chr17:1729927|1730085 hsa-miR-12114 1 0 0
chr17:1729927|1730085 hsa-miR-12115 1 1 0
chr17:1729927|1730085 hsa-miR-12119 1 0 0
chr17:1729927|1730085 hsa-miR-4433b-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6734-5p 1 0 0
chr17:1729927|1730085 hsa-miR-504-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6747-5p 1 0 0
chr17:1729927|1730085 hsa-miR-3150a-3p 1 0 0
chr17:1729927|1730085 hsa-miR-7106-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4687-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6720-5p 0 1 0
chr17:1729927|1730085 hsa-miR-6799-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6510-5p 1 0 0
chr17:1729927|1730085 hsa-miR-139-3p 1 0 0
chr17:1729927|1730085 hsa-miR-5187-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4786-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6515-5p 0 1 0
chr17:1729927|1730085 hsa-miR-6089 1 1 0
chr17:1729927|1730085 hsa-miR-6757-5p 0 1 0
chr17:1729927|1730085 hsa-miR-6873-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6880-5p 1 1 0
chr17:1729927|1730085 hsa-miR-7847-3p 1 1 0
chr17:1729927|1730085 hsa-miR-4709-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6730-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4655-5p 1 0 0
chr17:1729927|1730085 hsa-miR-197-5p 1 1 0
chr17:1729927|1730085 hsa-miR-6849-3p 0 1 0
chr17:1729927|1730085 hsa-miR-7845-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6716-5p 1 0 0
chr17:1729927|1730085 hsa-miR-3180-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6748-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6772-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6732-5p 1 0 0
chr17:1729927|1730085 hsa-miR-3190-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6798-5p 1 0 0
chr17:1729927|1730085 hsa-miR-3126-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6760-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6881-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6782-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6835-5p 1 0 0
chr17:1729927|1730085 hsa-miR-7109-5p 1 1 0
chr17:1729927|1730085 hsa-miR-4690-5p 1 0 0
chr17:1729927|1730085 hsa-miR-877-5p 1 0 0
chr17:1729927|1730085 hsa-miR-3648 1 0 0
chr17:1729927|1730085 hsa-miR-4787-5p 1 0 0
chr17:1729927|1730085 hsa-miR-149-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6824-5p 1 0 0
chr17:1729927|1730085 hsa-miR-3162-5p 1 0 0
chr17:1729927|1730085 hsa-miR-7154-5p 1 0 0
chr17:1729927|1730085 hsa-miR-873-3p 1 0 0
chr17:1729927|1730085 hsa-miR-4773 1 0 0
chr17:1729927|1730085 hsa-miR-92a-3p 0 1 0
chr17:1729927|1730085 hsa-miR-455-5p 0 1 0
chr17:1729927|1730085 hsa-miR-4709-5p 0 1 0
chr17:1729927|1730085 hsa-miR-4778-5p 0 1 0
chr17:1729927|1730085 hsa-miR-1207-5p 1 0 0
chr17:1729927|1730085 hsa-miR-1233-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4763-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6778-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6812-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6870-5p 1 0 0
chr17:1729927|1730085 hsa-miR-1343-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6737-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6752-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6754-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6803-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6819-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6842-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6851-5p 1 0 0
chr17:1729927|1730085 hsa-miR-7110-5p 1 1 0
chr17:1729927|1730085 hsa-miR-11181-3p 1 0 0
chr17:1729927|1730085 hsa-miR-1249-5p 1 1 0
chr17:1729927|1730085 hsa-miR-6722-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6751-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6763-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6797-5p 1 1 0
chr17:1729927|1730085 hsa-miR-6808-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6875-5p 1 0 0
chr17:1729927|1730085 hsa-miR-7111-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4728-5p 1 0 0
chr17:1729927|1730085 hsa-miR-5189-5p 0 1 0
chr17:1729927|1730085 hsa-miR-5196-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6780b-5p 1 1 0
chr17:1729927|1730085 hsa-miR-6836-5p 1 0 0
chr17:1729927|1730085 hsa-miR-1237-5p 1 0 0
chr17:1729927|1730085 hsa-miR-1909-3p 1 0 0
chr17:1729927|1730085 hsa-miR-328-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4632-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4649-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4725-3p 1 0 0
chr17:1729927|1730085 hsa-miR-4745-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4749-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6729-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6735-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6795-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6887-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6889-5p 1 0 0
chr17:1729927|1730085 hsa-miR-3187-5p 0 1 0
chr17:1729927|1730085 hsa-miR-4723-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6831-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6511a-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6856-5p 0 1 0
chr17:1729927|1730085 hsa-miR-1285-3p 1 1 0
chr17:1729927|1730085 hsa-miR-4747-5p 1 0 0
chr17:1729927|1730085 hsa-miR-4716-3p 1 0 0
chr17:1729927|1730085 hsa-miR-6750-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6849-5p 1 0 0
chr17:1729927|1730085 hsa-miR-6512-3p 0 1 0
chr17:1729927|1730085 hsa-miR-135a-2-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:1729927|1730085
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MLLFFFFFFFFFFETESRTVAQAGVQWHNLSSLQ
Nucleotide Sequence CTGCTTCTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTGAGACAGAGTCTCGCACTGTTGCCCAGGCTGGAGTGCAATGGCACAATCTCAGTTCATTGCAA
CircID chr17:1729927|1730085
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MSQKKKKRRRRRREAGKGRYGETEGVEGREARGK
Nucleotide Sequence CTGTCTCAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAGAAGCAGGGAAAGGCCGTTATGGCGAGACCGAGGGAGTGGAGGGAAGAGAGGCCAGAGGGAAG
CircID chr17:1729927|1730085
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MHSSLGNSARLCLKKKKKEEEEEEKQGKAVMARPREWREERPEG
Nucleotide Sequence TTGCACTCCAGCCTGGGCAACAGTGCGAGACTCTGTCTCAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAGAAGCAGGGAAAGGCCGTTATGGCGAGACCGAGGGAGTGGAGGGAAGAGAGGCCAGAGGGA
CircID chr17:1729927|1730085
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MRLCHCTPAWATVRDSVSKKKKKKKKKKRSRERPLWRDRGSGGKRGQRE
Nucleotide Sequence CTGAGATTGTGCCATTGCACTCCAGCCTGGGCAACAGTGCGAGACTCTGTCTCAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAGAAGCAGGGAAAGGCCGTTATGGCGAGACCGAGGGAGTGGAGGGAAGAGAGGCCAGAGGGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab