CircRNA Information

General Information
circRNA Basic Information
CircID chr17:17816651|17817017
Strand +
CircType exon
Host Gene ENSG00000072310.15;
Algorism CIRI2;
Sequence TCAGGCCCCGCCGTGTACTTCTGGAGGCATCGCAAGCAGGCTGACCTGGACCTGGCCCGGGTAAGGGGCTGGCCCCGGCAGAGTGGGCAGGGCAGGGACCCCAGGCTGTGAAGGTGCTGGGTGTCAACCCTTGTTCCTGCTCCCTGTGCACACCATGAATCTGTCCCGTCCTCCCTGTGCCTAGCCACGCATCCGCAGACCCCCACCACCCCTCCAGAGCCTGCTGTGGACGGCTCTTCTGAGCTTTGGGGCAGCTGCTCTGACCTCACTTTTCTCACCTGGAAAACCCTCATCCACAGGGAGACTTTGCCCAGGCTGCCCAGCAGCTGTGGCTGGCCCTGCGGGCACTGGGCCGGCCCCTGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:17816651|17817017 hsa-miR-22-5p 0 0 1
chr17:17816651|17817017 hsa-miR-22-3p 0 0 1
chr17:17816651|17817017 hsa-miR-27a-5p 0 0 1
chr17:17816651|17817017 hsa-miR-27a-3p 0 0 1
chr17:17816651|17817017 hsa-miR-214-5p 0 0 1
chr17:17816651|17817017 hsa-miR-214-3p 0 0 1
chr17:17816651|17817017 hsa-miR-27b-5p 0 0 1
chr17:17816651|17817017 hsa-miR-27b-3p 0 0 1
chr17:17816651|17817017 hsa-miR-484 0 0 1
chr17:17816651|17817017 hsa-miR-539-5p 0 0 1
chr17:17816651|17817017 hsa-miR-539-3p 0 0 1
chr17:17816651|17817017 hsa-miR-563 0 0 1
chr17:17816651|17817017 hsa-miR-596 0 0 1
chr17:17816651|17817017 hsa-miR-602 0 0 1
chr17:17816651|17817017 hsa-miR-608 1 1 1
chr17:17816651|17817017 hsa-miR-612 0 1 1
chr17:17816651|17817017 hsa-miR-646 0 1 1
chr17:17816651|17817017 hsa-miR-661 1 1 1
chr17:17816651|17817017 hsa-miR-874-5p 0 0 1
chr17:17816651|17817017 hsa-miR-874-3p 0 0 1
chr17:17816651|17817017 hsa-miR-541-5p 0 0 1
chr17:17816651|17817017 hsa-miR-541-3p 0 0 1
chr17:17816651|17817017 hsa-miR-744-5p 0 0 1
chr17:17816651|17817017 hsa-miR-744-3p 0 0 1
chr17:17816651|17817017 hsa-miR-873-5p 0 0 1
chr17:17816651|17817017 hsa-miR-873-3p 0 0 1
chr17:17816651|17817017 hsa-miR-760 1 1 1
chr17:17816651|17817017 hsa-miR-1293 0 1 1
chr17:17816651|17817017 hsa-miR-1294 0 1 1
chr17:17816651|17817017 hsa-miR-1255a 0 0 1
chr17:17816651|17817017 hsa-miR-1321 0 0 1
chr17:17816651|17817017 hsa-miR-1825 0 1 1
chr17:17816651|17817017 hsa-miR-125a-3p 1 1 1
chr17:17816651|17817017 hsa-miR-615-5p 0 1 1
chr17:17816651|17817017 hsa-miR-296-3p 1 0 1
chr17:17816651|17817017 hsa-miR-146b-3p 0 1 1
chr17:17816651|17817017 hsa-miR-941 0 0 1
chr17:17816651|17817017 hsa-miR-339-5p 0 0 1
chr17:17816651|17817017 hsa-miR-654-5p 0 0 1
chr17:17816651|17817017 hsa-miR-513a-5p 0 0 1
chr17:17816651|17817017 hsa-miR-1207-5p 1 0 1
chr17:17816651|17817017 hsa-miR-324-3p 0 0 1
chr17:17816651|17817017 hsa-miR-1274a 0 0 1
chr17:17816651|17817017 hsa-miR-1274b 0 0 1
chr17:17816651|17817017 hsa-miR-1255b 0 0 1
chr17:17816651|17817017 hsa-miR-220c 0 0 1
chr17:17816651|17817017 hsa-miR-1285 0 0 1
chr17:17816651|17817017 hsa-miR-514 0 0 1
chr17:17816651|17817017 hsa-miR-516b 0 0 1
chr17:17816651|17817017 hsa-miR-663 0 0 1
chr17:17816651|17817017 hsa-miR-637 1 0 0
chr17:17816651|17817017 hsa-miR-663a 1 0 0
chr17:17816651|17817017 hsa-miR-658 1 0 0
chr17:17816651|17817017 hsa-miR-762 1 0 0
chr17:17816651|17817017 hsa-miR-933 1 0 0
chr17:17816651|17817017 hsa-miR-1268a 1 0 0
chr17:17816651|17817017 hsa-miR-1913 0 1 0
chr17:17816651|17817017 hsa-miR-3141 1 0 0
chr17:17816651|17817017 hsa-miR-3155a 1 1 0
chr17:17816651|17817017 hsa-miR-3188 1 0 0
chr17:17816651|17817017 hsa-miR-3197 1 0 0
chr17:17816651|17817017 hsa-miR-4270 1 1 0
chr17:17816651|17817017 hsa-miR-3665 1 0 0
chr17:17816651|17817017 hsa-miR-3945 1 0 0
chr17:17816651|17817017 hsa-miR-1268b 1 0 0
chr17:17816651|17817017 hsa-miR-4441 0 1 0
chr17:17816651|17817017 hsa-miR-4476 1 0 0
chr17:17816651|17817017 hsa-miR-3155b 1 1 0
chr17:17816651|17817017 hsa-miR-4505 1 0 0
chr17:17816651|17817017 hsa-miR-2392 1 0 0
chr17:17816651|17817017 hsa-miR-3972 1 1 0
chr17:17816651|17817017 hsa-miR-4651 1 1 0
chr17:17816651|17817017 hsa-miR-4686 1 0 0
chr17:17816651|17817017 hsa-miR-4688 1 0 0
chr17:17816651|17817017 hsa-miR-4710 1 0 0
chr17:17816651|17817017 hsa-miR-4734 1 0 0
chr17:17816651|17817017 hsa-miR-4739 1 1 0
chr17:17816651|17817017 hsa-miR-5090 1 1 0
chr17:17816651|17817017 hsa-miR-5194 1 0 0
chr17:17816651|17817017 hsa-miR-5787 1 1 0
chr17:17816651|17817017 hsa-miR-6081 0 1 0
chr17:17816651|17817017 hsa-miR-6086 1 0 0
chr17:17816651|17817017 hsa-miR-6090 1 0 0
chr17:17816651|17817017 hsa-miR-6165 1 1 0
chr17:17816651|17817017 hsa-miR-6860 1 1 0
chr17:17816651|17817017 hsa-miR-7704 1 0 0
chr17:17816651|17817017 hsa-miR-8078 1 0 0
chr17:17816651|17817017 hsa-miR-8089 1 0 0
chr17:17816651|17817017 hsa-miR-9900 0 1 0
chr17:17816651|17817017 hsa-miR-150-3p 1 0 0
chr17:17816651|17817017 hsa-miR-4433b-3p 1 0 0
chr17:17816651|17817017 hsa-miR-18a-3p 0 1 0
chr17:17816651|17817017 hsa-miR-92a-2-5p 1 1 0
chr17:17816651|17817017 hsa-miR-128-1-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6734-5p 1 0 0
chr17:17816651|17817017 hsa-miR-7155-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6861-5p 1 0 0
chr17:17816651|17817017 hsa-miR-7106-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6825-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6894-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6799-5p 1 0 0
chr17:17816651|17817017 hsa-miR-3692-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6804-5p 1 0 0
chr17:17816651|17817017 hsa-miR-3622a-5p 1 0 0
chr17:17816651|17817017 hsa-miR-5187-5p 1 0 0
chr17:17816651|17817017 hsa-miR-3934-5p 1 1 0
chr17:17816651|17817017 hsa-miR-7114-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6515-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6089 1 0 0
chr17:17816651|17817017 hsa-miR-7847-3p 1 0 0
chr17:17816651|17817017 hsa-miR-4755-3p 1 0 0
chr17:17816651|17817017 hsa-miR-6727-5p 1 0 0
chr17:17816651|17817017 hsa-miR-4474-3p 1 0 0
chr17:17816651|17817017 hsa-miR-6721-5p 1 1 0
chr17:17816651|17817017 hsa-miR-23b-5p 0 1 0
chr17:17816651|17817017 hsa-miR-7845-5p 1 0 0
chr17:17816651|17817017 hsa-miR-1915-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6742-5p 0 1 0
chr17:17816651|17817017 hsa-miR-3605-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6748-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6796-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6732-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6798-5p 1 1 0
chr17:17816651|17817017 hsa-miR-3126-5p 1 0 0
chr17:17816651|17817017 hsa-miR-486-3p 1 0 0
chr17:17816651|17817017 hsa-miR-6782-5p 1 1 0
chr17:17816651|17817017 hsa-miR-3194-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6821-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6810-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6850-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6786-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6852-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6835-5p 1 0 0
chr17:17816651|17817017 hsa-miR-939-3p 0 1 0
chr17:17816651|17817017 hsa-miR-1226-5p 1 0 0
chr17:17816651|17817017 hsa-miR-4763-5p 0 1 0
chr17:17816651|17817017 hsa-miR-1229-5p 1 0 0
chr17:17816651|17817017 hsa-miR-193b-5p 1 1 0
chr17:17816651|17817017 hsa-miR-4640-5p 1 1 0
chr17:17816651|17817017 hsa-miR-4691-3p 0 1 0
chr17:17816651|17817017 hsa-miR-3691-5p 0 1 0
chr17:17816651|17817017 hsa-miR-7113-3p 1 1 0
chr17:17816651|17817017 hsa-miR-1228-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6771-5p 1 0 0
chr17:17816651|17817017 hsa-miR-4690-5p 1 1 0
chr17:17816651|17817017 hsa-miR-92b-5p 1 0 0
chr17:17816651|17817017 hsa-miR-4787-5p 1 0 0
chr17:17816651|17817017 hsa-miR-4446-3p 1 0 0
chr17:17816651|17817017 hsa-miR-149-3p 1 0 0
chr17:17816651|17817017 hsa-miR-6789-5p 1 1 0
chr17:17816651|17817017 hsa-miR-3162-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6781-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6895-5p 0 1 0
chr17:17816651|17817017 hsa-miR-519d-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6801-5p 0 1 0
chr17:17816651|17817017 hsa-miR-4746-3p 1 0 0
chr17:17816651|17817017 hsa-miR-6752-3p 0 1 0
chr17:17816651|17817017 hsa-miR-483-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6501-3p 0 1 0
chr17:17816651|17817017 hsa-miR-6777-3p 0 1 0
chr17:17816651|17817017 hsa-miR-518c-5p 0 1 0
chr17:17816651|17817017 hsa-miR-5004-5p 1 1 0
chr17:17816651|17817017 hsa-miR-5589-3p 1 0 0
chr17:17816651|17817017 hsa-miR-449b-3p 0 1 0
chr17:17816651|17817017 hsa-miR-3173-5p 0 1 0
chr17:17816651|17817017 hsa-miR-371b-3p 0 1 0
chr17:17816651|17817017 hsa-miR-5699-5p 0 1 0
chr17:17816651|17817017 hsa-miR-4738-5p 0 1 0
chr17:17816651|17817017 hsa-miR-4763-3p 1 1 0
chr17:17816651|17817017 hsa-miR-6769b-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6787-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6816-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6775-5p 1 0 0
chr17:17816651|17817017 hsa-miR-5001-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6737-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6743-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6752-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6754-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6756-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6769a-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6803-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6819-5p 1 0 0
chr17:17816651|17817017 hsa-miR-7110-5p 1 0 0
chr17:17816651|17817017 hsa-miR-11181-3p 1 0 0
chr17:17816651|17817017 hsa-miR-6722-3p 1 1 0
chr17:17816651|17817017 hsa-miR-6751-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6774-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6779-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6797-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6808-5p 1 0 0
chr17:17816651|17817017 hsa-miR-7111-5p 1 0 0
chr17:17816651|17817017 hsa-miR-3620-5p 1 0 0
chr17:17816651|17817017 hsa-miR-4728-5p 1 0 0
chr17:17816651|17817017 hsa-miR-5189-5p 1 1 0
chr17:17816651|17817017 hsa-miR-5196-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6836-5p 1 1 0
chr17:17816651|17817017 hsa-miR-10396a-5p 1 0 0
chr17:17816651|17817017 hsa-miR-10396b-5p 1 0 0
chr17:17816651|17817017 hsa-miR-1909-3p 1 1 0
chr17:17816651|17817017 hsa-miR-4632-5p 1 0 0
chr17:17816651|17817017 hsa-miR-4649-5p 1 0 0
chr17:17816651|17817017 hsa-miR-4726-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6729-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6738-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6777-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6794-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6795-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6846-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6848-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6883-5p 1 1 0
chr17:17816651|17817017 hsa-miR-6887-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6889-5p 1 0 0
chr17:17816651|17817017 hsa-miR-3187-5p 1 1 0
chr17:17816651|17817017 hsa-miR-939-5p 1 0 0
chr17:17816651|17817017 hsa-miR-3940-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6731-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6799-3p 0 1 0
chr17:17816651|17817017 hsa-miR-7843-5p 1 0 0
chr17:17816651|17817017 hsa-miR-1914-3p 1 0 0
chr17:17816651|17817017 hsa-miR-4665-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6736-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6855-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6785-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6762-5p 1 0 0
chr17:17816651|17817017 hsa-miR-6837-5p 0 1 0
chr17:17816651|17817017 hsa-miR-6783-3p 1 1 0
chr17:17816651|17817017 hsa-miR-3619-5p 1 1 0
chr17:17816651|17817017 hsa-miR-128-2-5p 0 1 0
chr17:17816651|17817017 hsa-miR-1271-5p 0 1 0
chr17:17816651|17817017 hsa-miR-498-3p 0 1 0
chr17:17816651|17817017 hsa-miR-380-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:17816651|17817017
ORF Type ORF1
Protein Length 64
Nucleotide Length 192
Protein Sequence MCLATHPQTPTTPPEPAVDGSSELWGSCSDLTFLTWKTLIHRETLPRLPSSCGWPCGHWAGPCP
Nucleotide Sequence CTGTGCCTAGCCACGCATCCGCAGACCCCCACCACCCCTCCAGAGCCTGCTGTGGACGGCTCTTCTGAGCTTTGGGGCAGCTGCTCTGACCTCACTTTTCTCACCTGGAAAACCCTCATCCACAGGGAGACTTTGCCCAGGCTGCCCAGCAGCTGTGGCTGGCCCTGCGGGCACTGGGCCGGCCCCTGCCCA
CircID chr17:17816651|17817017
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MLWTALLSFGAAALTSLFSPGKPSSTGRLCPGCPAAVAGPAGTGPAPAH
Nucleotide Sequence CTGCTGTGGACGGCTCTTCTGAGCTTTGGGGCAGCTGCTCTGACCTCACTTTTCTCACCTGGAAAACCCTCATCCACAGGGAGACTTTGCCCAGGCTGCCCAGCAGCTGTGGCTGGCCCTGCGGGCACTGGGCCGGCCCCTGCCCAC
CircID chr17:17816651|17817017
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MAPAEWAGQGPQAVKVLGVNPCSCSLCTP
Nucleotide Sequence CTGGCCCCGGCAGAGTGGGCAGGGCAGGGACCCCAGGCTGTGAAGGTGCTGGGTGTCAACCCTTGTTCCTGCTCCCTGTGCACACCATGA
CircID chr17:17816651|17817017
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MENPHPQGDFAQAAQQLWLALRALGRPLP
Nucleotide Sequence CTGGAAAACCCTCATCCACAGGGAGACTTTGCCCAGGCTGCCCAGCAGCTGTGGCTGGCCCTGCGGGCACTGGGCCGGCCCCTGCCC
CircID chr17:17816651|17817017
ORF Type ORF5
Protein Length 72
Nucleotide Length 216
Protein Sequence MEGWWGSADAWLGTGRTGQIHGVHREQEQGLTPSTFTAWGPCPAHSAGASPLPGPGPGQPACDASRSTRRGL
Nucleotide Sequence CTGGAGGGGTGGTGGGGGTCTGCGGATGCGTGGCTAGGCACAGGGAGGACGGGACAGATTCATGGTGTGCACAGGGAGCAGGAACAAGGGTTGACACCCAGCACCTTCACAGCCTGGGGTCCCTGCCCTGCCCACTCTGCCGGGGCCAGCCCCTTACCCGGGCCAGGTCCAGGTCAGCCTGCTTGCGATGCCTCCAGAAGTACACGGCGGGGCCTG
CircID chr17:17816651|17817017
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MPTLPGPAPYPGQVQVSLLAMPPEVHGGA
Nucleotide Sequence CTGCCCACTCTGCCGGGGCCAGCCCCTTACCCGGGCCAGGTCCAGGTCAGCCTGCTTGCGATGCCTCCAGAAGTACACGGCGGGGCCTGA
CircID chr17:17816651|17817017
ORF Type ORF7
Protein Length 108
Nucleotide Length 324
Protein Sequence MLGSLGKVSLWMRVFQVRKVRSEQLPQSSEEPSTAGSGGVVGVCGCVARHREDGTDSWCAQGAGTRVDTQHLHSLGSLPCPLCRGQPLTRARSRSACLRCLQKYTAGP
Nucleotide Sequence CTGCTGGGCAGCCTGGGCAAAGTCTCCCTGTGGATGAGGGTTTTCCAGGTGAGAAAAGTGAGGTCAGAGCAGCTGCCCCAAAGCTCAGAAGAGCCGTCCACAGCAGGCTCTGGAGGGGTGGTGGGGGTCTGCGGATGCGTGGCTAGGCACAGGGAGGACGGGACAGATTCATGGTGTGCACAGGGAGCAGGAACAAGGGTTGACACCCAGCACCTTCACAGCCTGGGGTCCCTGCCCTGCCCACTCTGCCGGGGCCAGCCCCTTACCCGGGCCAGGTCCAGGTCAGCCTGCTTGCGATGCCTCCAGAAGTACACGGCGGGGCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab