CircRNA Information

General Information
circRNA Basic Information
CircID chr17:18246404|18246710
Strand -
CircType exon
Host Gene ENSG00000177731.14;
Algorism CIRI2;
Sequence TTCCTCTTGAAATGGGACAGGAACTTGGGGTTCTCCTGCTGCTGCGTCATGCGTACCACCTGGGGATGTGGAAGTGTTAGGGGCAGCTCCCTGGACCCCCACCTGCCCCTCGGGAGCCTAACCTTCGCTGGGTCTGAGCCCCACCACACCCCTCCGCCTGGCCTCGGGCTCGCGGGGCTGCCAGGCACACCTCCAGCTTCCCAGGGAAGAGGCTCTCGAACTTCTTTTGCAGGCTGAAGGTGAAGGTGAGCCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:18246404|18246710 hsa-miR-15a-5p 0 0 1
chr17:18246404|18246710 hsa-miR-15a-3p 0 0 1
chr17:18246404|18246710 hsa-miR-22-5p 0 0 1
chr17:18246404|18246710 hsa-miR-22-3p 0 0 1
chr17:18246404|18246710 hsa-miR-148a-5p 0 0 1
chr17:18246404|18246710 hsa-miR-148a-3p 0 0 1
chr17:18246404|18246710 hsa-miR-214-5p 0 0 1
chr17:18246404|18246710 hsa-miR-214-3p 0 0 1
chr17:18246404|18246710 hsa-miR-15b-5p 0 0 1
chr17:18246404|18246710 hsa-miR-15b-3p 0 0 1
chr17:18246404|18246710 hsa-miR-141-5p 0 0 1
chr17:18246404|18246710 hsa-miR-141-3p 0 0 1
chr17:18246404|18246710 hsa-miR-152-5p 0 0 1
chr17:18246404|18246710 hsa-miR-152-3p 0 0 1
chr17:18246404|18246710 hsa-miR-149-5p 0 0 1
chr17:18246404|18246710 hsa-miR-149-3p 0 0 1
chr17:18246404|18246710 hsa-miR-195-5p 0 0 1
chr17:18246404|18246710 hsa-miR-195-3p 0 0 1
chr17:18246404|18246710 hsa-miR-200a-5p 0 0 1
chr17:18246404|18246710 hsa-miR-200a-3p 0 0 1
chr17:18246404|18246710 hsa-miR-148b-5p 0 0 1
chr17:18246404|18246710 hsa-miR-148b-3p 0 0 1
chr17:18246404|18246710 hsa-miR-335-5p 0 0 1
chr17:18246404|18246710 hsa-miR-335-3p 0 0 1
chr17:18246404|18246710 hsa-miR-424-5p 0 0 1
chr17:18246404|18246710 hsa-miR-424-3p 0 0 1
chr17:18246404|18246710 hsa-miR-412-5p 0 0 1
chr17:18246404|18246710 hsa-miR-412-3p 0 0 1
chr17:18246404|18246710 hsa-miR-497-5p 0 0 1
chr17:18246404|18246710 hsa-miR-497-3p 0 0 1
chr17:18246404|18246710 hsa-miR-498-5p 0 0 1
chr17:18246404|18246710 hsa-miR-498-3p 0 0 1
chr17:18246404|18246710 hsa-miR-558 0 0 1
chr17:18246404|18246710 hsa-miR-589-5p 0 0 1
chr17:18246404|18246710 hsa-miR-589-3p 0 0 1
chr17:18246404|18246710 hsa-miR-596 0 0 1
chr17:18246404|18246710 hsa-miR-617 0 0 1
chr17:18246404|18246710 hsa-miR-661 0 0 1
chr17:18246404|18246710 hsa-miR-658 1 1 1
chr17:18246404|18246710 hsa-miR-541-5p 0 0 1
chr17:18246404|18246710 hsa-miR-541-3p 0 0 1
chr17:18246404|18246710 hsa-miR-920 0 0 1
chr17:18246404|18246710 hsa-miR-1236-5p 0 0 1
chr17:18246404|18246710 hsa-miR-1236-3p 0 0 1
chr17:18246404|18246710 hsa-miR-1825 0 0 1
chr17:18246404|18246710 hsa-miR-145-5p 0 0 1
chr17:18246404|18246710 hsa-miR-486-3p 0 1 1
chr17:18246404|18246710 hsa-miR-615-5p 0 1 1
chr17:18246404|18246710 hsa-miR-885-3p 0 0 1
chr17:18246404|18246710 hsa-miR-199a-5p 0 0 1
chr17:18246404|18246710 hsa-miR-423-5p 0 1 1
chr17:18246404|18246710 hsa-miR-654-5p 0 0 1
chr17:18246404|18246710 hsa-miR-199b-5p 0 0 1
chr17:18246404|18246710 hsa-miR-1207-5p 0 0 1
chr17:18246404|18246710 hsa-miR-324-3p 0 0 1
chr17:18246404|18246710 hsa-miR-1274a 0 0 1
chr17:18246404|18246710 hsa-miR-550 0 0 1
chr17:18246404|18246710 hsa-miR-16 0 0 1
chr17:18246404|18246710 hsa-miR-1254 0 0 1
chr17:18246404|18246710 hsa-miR-24 0 0 1
chr17:18246404|18246710 hsa-miR-608 1 0 0
chr17:18246404|18246710 hsa-miR-636 0 1 0
chr17:18246404|18246710 hsa-miR-663a 1 0 0
chr17:18246404|18246710 hsa-miR-762 1 0 0
chr17:18246404|18246710 hsa-miR-761 0 1 0
chr17:18246404|18246710 hsa-miR-298 1 0 0
chr17:18246404|18246710 hsa-miR-1203 1 0 0
chr17:18246404|18246710 hsa-miR-1913 0 1 0
chr17:18246404|18246710 hsa-miR-2861 1 0 0
chr17:18246404|18246710 hsa-miR-3141 1 0 0
chr17:18246404|18246710 hsa-miR-4284 0 1 0
chr17:18246404|18246710 hsa-miR-3652 0 1 0
chr17:18246404|18246710 hsa-miR-3665 0 1 0
chr17:18246404|18246710 hsa-miR-3917 1 0 0
chr17:18246404|18246710 hsa-miR-4437 0 1 0
chr17:18246404|18246710 hsa-miR-3135b 0 1 0
chr17:18246404|18246710 hsa-miR-4688 0 1 0
chr17:18246404|18246710 hsa-miR-4706 1 0 0
chr17:18246404|18246710 hsa-miR-5194 0 1 0
chr17:18246404|18246710 hsa-miR-6076 0 1 0
chr17:18246404|18246710 hsa-miR-6132 0 1 0
chr17:18246404|18246710 hsa-miR-7150 0 1 0
chr17:18246404|18246710 hsa-miR-7974 1 0 0
chr17:18246404|18246710 hsa-miR-8072 1 0 0
chr17:18246404|18246710 hsa-miR-8073 0 1 0
chr17:18246404|18246710 hsa-miR-12114 1 1 0
chr17:18246404|18246710 hsa-miR-4747-3p 1 0 0
chr17:18246404|18246710 hsa-miR-92a-2-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6747-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6765-5p 1 0 0
chr17:18246404|18246710 hsa-miR-125b-1-3p 1 0 0
chr17:18246404|18246710 hsa-miR-6825-5p 1 0 0
chr17:18246404|18246710 hsa-miR-1972 1 0 0
chr17:18246404|18246710 hsa-miR-7851-3p 0 1 0
chr17:18246404|18246710 hsa-miR-4768-3p 0 1 0
chr17:18246404|18246710 hsa-miR-6089 1 1 0
chr17:18246404|18246710 hsa-miR-3192-5p 0 1 0
chr17:18246404|18246710 hsa-miR-4722-5p 0 1 0
chr17:18246404|18246710 hsa-miR-24-3p 0 1 0
chr17:18246404|18246710 hsa-miR-6806-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6742-5p 1 1 0
chr17:18246404|18246710 hsa-miR-6796-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6782-5p 1 1 0
chr17:18246404|18246710 hsa-miR-6821-5p 1 0 0
chr17:18246404|18246710 hsa-miR-5008-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6882-3p 0 1 0
chr17:18246404|18246710 hsa-miR-6786-5p 1 0 0
chr17:18246404|18246710 hsa-miR-5088-5p 1 0 0
chr17:18246404|18246710 hsa-miR-1226-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6784-5p 1 0 0
chr17:18246404|18246710 hsa-miR-4640-5p 1 1 0
chr17:18246404|18246710 hsa-miR-5580-5p 0 1 0
chr17:18246404|18246710 hsa-miR-3677-3p 1 0 0
chr17:18246404|18246710 hsa-miR-4783-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6802-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6781-5p 1 0 0
chr17:18246404|18246710 hsa-miR-339-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6895-5p 1 0 0
chr17:18246404|18246710 hsa-miR-744-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6868-5p 0 1 0
chr17:18246404|18246710 hsa-miR-2114-3p 0 1 0
chr17:18246404|18246710 hsa-miR-1296-3p 1 1 0
chr17:18246404|18246710 hsa-miR-4283 0 1 0
chr17:18246404|18246710 hsa-miR-1199-3p 1 0 0
chr17:18246404|18246710 hsa-miR-10400-5p 1 0 0
chr17:18246404|18246710 hsa-miR-4763-3p 1 1 0
chr17:18246404|18246710 hsa-miR-6787-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6775-5p 0 1 0
chr17:18246404|18246710 hsa-miR-1343-5p 1 0 0
chr17:18246404|18246710 hsa-miR-5001-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6726-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6743-5p 1 1 0
chr17:18246404|18246710 hsa-miR-6752-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6756-5p 1 1 0
chr17:18246404|18246710 hsa-miR-6803-5p 1 1 0
chr17:18246404|18246710 hsa-miR-6851-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6722-3p 1 0 0
chr17:18246404|18246710 hsa-miR-6751-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6797-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6808-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6879-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6754-3p 1 1 0
chr17:18246404|18246710 hsa-miR-1915-3p 1 0 0
chr17:18246404|18246710 hsa-miR-3620-5p 0 1 0
chr17:18246404|18246710 hsa-miR-6836-5p 0 1 0
chr17:18246404|18246710 hsa-miR-10396a-5p 1 0 0
chr17:18246404|18246710 hsa-miR-10396b-5p 1 1 0
chr17:18246404|18246710 hsa-miR-1909-3p 1 0 0
chr17:18246404|18246710 hsa-miR-328-5p 1 1 0
chr17:18246404|18246710 hsa-miR-4649-5p 1 0 0
chr17:18246404|18246710 hsa-miR-4726-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6729-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6883-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6845-5p 1 0 0
chr17:18246404|18246710 hsa-miR-939-5p 1 0 0
chr17:18246404|18246710 hsa-miR-10396a-3p 1 0 0
chr17:18246404|18246710 hsa-miR-10396b-3p 1 0 0
chr17:18246404|18246710 hsa-miR-1199-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6877-3p 0 1 0
chr17:18246404|18246710 hsa-miR-4646-5p 0 1 0
chr17:18246404|18246710 hsa-miR-4667-5p 0 1 0
chr17:18246404|18246710 hsa-miR-3184-5p 1 1 0
chr17:18246404|18246710 hsa-miR-3689d 0 1 0
chr17:18246404|18246710 hsa-miR-6791-5p 1 1 0
chr17:18246404|18246710 hsa-miR-6762-5p 1 0 0
chr17:18246404|18246710 hsa-miR-6511a-3p 1 1 0
chr17:18246404|18246710 hsa-miR-10400-3p 1 0 0
chr17:18246404|18246710 hsa-miR-6511b-3p 1 0 0
chr17:18246404|18246710 hsa-miR-6819-3p 0 1 0
chr17:18246404|18246710 hsa-miR-6823-3p 0 1 0
chr17:18246404|18246710 hsa-miR-6838-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:18246404|18246710
ORF Type ORF1
Protein Length 76
Nucleotide Length 231
Protein Sequence MKWDRNLGFSCCCVMRTTWGCGSVRGSSLDPHLPLGSLTFAGSEPHHTPPPGLGLAGLPGTPPASQGRGSRTSFAG
Nucleotide Sequence TTGAAATGGGACAGGAACTTGGGGTTCTCCTGCTGCTGCGTCATGCGTACCACCTGGGGATGTGGAAGTGTTAGGGGCAGCTCCCTGGACCCCCACCTGCCCCTCGGGAGCCTAACCTTCGCTGGGTCTGAGCCCCACCACACCCCTCCGCCTGGCCTCGGGCTCGCGGGGCTGCCAGGCACACCTCCAGCTTCCCAGGGAAGAGGCTCTCGAACTTCTTTTGCAGGCTGA
CircID chr17:18246404|18246710
ORF Type ORF2
Protein Length 60
Nucleotide Length 180
Protein Sequence MGLSPTTPLRLASGSRGCQAHLQLPREEALELLLQAEGEGEPAHIGGFTALPEVHDALEV
Nucleotide Sequence CTGGGTCTGAGCCCCACCACACCCCTCCGCCTGGCCTCGGGCTCGCGGGGCTGCCAGGCACACCTCCAGCTTCCCAGGGAAGAGGCTCTCGAACTTCTTTTGCAGGCTGAAGGTGAAGGTGAGCCAGCCCATATTGGAGGCTTCACGGCCCTGCCAGAAGTACACGATGCACTGGAAGTC
CircID chr17:18246404|18246710
ORF Type ORF3
Protein Length 60
Nucleotide Length 183
Protein Sequence MGWLTFTFSLQKKFESLFPGKLEVCLAAPRARGQAEGCGGAQTQRRLGSRGAGGGPGSCP
Nucleotide Sequence ATGGGCTGGCTCACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGCCTCTTCCCTGGGAAGCTGGAGGTGTGCCTGGCAGCCCCGCGAGCCCGAGGCCAGGCGGAGGGGTGTGGTGGGGCTCAGACCCAGCGAAGGTTAGGCTCCCGAGGGGCAGGTGGGGGTCCAGGGAGCTGCCCCTAA
CircID chr17:18246404|18246710
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MGSWRCAWQPREPEARRRGVVGLRPSEG
Nucleotide Sequence CTGGGAAGCTGGAGGTGTGCCTGGCAGCCCCGCGAGCCCGAGGCCAGGCGGAGGGGTGTGGTGGGGCTCAGACCCAGCGAAGGTTAG
CircID chr17:18246404|18246710
ORF Type ORF5
Protein Length 84
Nucleotide Length 252
Protein Sequence MAHLHLQPAKEVREPLPWEAGGVPGSPASPRPGGGVWWGSDPAKVRLPRGRWGSRELPLTLPHPQVVRMTQQQENPKFLSHFKR
Nucleotide Sequence CTGGCTCACCTTCACCTTCAGCCTGCAAAAGAAGTTCGAGAGCCTCTTCCCTGGGAAGCTGGAGGTGTGCCTGGCAGCCCCGCGAGCCCGAGGCCAGGCGGAGGGGTGTGGTGGGGCTCAGACCCAGCGAAGGTTAGGCTCCCGAGGGGCAGGTGGGGGTCCAGGGAGCTGCCCCTAACACTTCCACATCCCCAGGTGGTACGCATGACGCAGCAGCAGGAGAACCCCAAGTTCCTGTCCCATTTCAAGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab