CircRNA Information

General Information
circRNA Basic Information
CircID chr17:18246972|18247231
Strand +
CircType exon
Host Gene ENSG00000177731.14;
Algorism CIRI2;
Sequence CAGATGAAGGCTGACCTCACTGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGGTGGGGGCAGGGCCGGGACCGGGGCGCGGGGGGGGGGGTGGGGGGCAGGCCGAGGGCGGGGCCTATGCGCAGAGCGCGCTCAGACCTGCCGCGGGGCGGGTCCCTCTCACCTGCAGGCGGAGCAGCTGATGGAGGAGTGGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:18246972|18247231 hsa-miR-205-5p 0 0 1
chr17:18246972|18247231 hsa-miR-205-3p 0 0 1
chr17:18246972|18247231 hsa-miR-518f-5p 0 0 1
chr17:18246972|18247231 hsa-miR-518f-3p 0 0 1
chr17:18246972|18247231 hsa-miR-518b 0 0 1
chr17:18246972|18247231 hsa-miR-518c-5p 0 0 1
chr17:18246972|18247231 hsa-miR-518c-3p 0 0 1
chr17:18246972|18247231 hsa-miR-657 0 0 1
chr17:18246972|18247231 hsa-miR-766-5p 0 0 1
chr17:18246972|18247231 hsa-miR-766-3p 0 0 1
chr17:18246972|18247231 hsa-miR-874-5p 0 0 1
chr17:18246972|18247231 hsa-miR-874-3p 0 0 1
chr17:18246972|18247231 hsa-miR-1234-3p 0 0 1
chr17:18246972|18247231 hsa-miR-1205 0 0 1
chr17:18246972|18247231 hsa-miR-1291 0 0 1
chr17:18246972|18247231 hsa-miR-1294 0 1 1
chr17:18246972|18247231 hsa-miR-1234 0 0 1
chr17:18246972|18247231 hsa-miR-125a-3p 0 0 1
chr17:18246972|18247231 hsa-miR-339-3p 0 0 1
chr17:18246972|18247231 hsa-miR-1224-3p 0 1 1
chr17:18246972|18247231 hsa-miR-1207-3p 0 0 1
chr17:18246972|18247231 hsa-miR-338-3p 0 0 1
chr17:18246972|18247231 hsa-miR-324-3p 0 0 1
chr17:18246972|18247231 hsa-miR-483-3p 0 1 1
chr17:18246972|18247231 hsa-miR-518a-3p 0 0 1
chr17:18246972|18247231 hsa-miR-518d-3p 0 0 1
chr17:18246972|18247231 hsa-miR-578 0 1 0
chr17:18246972|18247231 hsa-miR-602 0 1 0
chr17:18246972|18247231 hsa-miR-661 1 0 0
chr17:18246972|18247231 hsa-miR-1260a 0 1 0
chr17:18246972|18247231 hsa-miR-1913 1 1 0
chr17:18246972|18247231 hsa-miR-3153 0 1 0
chr17:18246972|18247231 hsa-miR-1260b 0 1 0
chr17:18246972|18247231 hsa-miR-3665 0 1 0
chr17:18246972|18247231 hsa-miR-3683 0 1 0
chr17:18246972|18247231 hsa-miR-4449 0 1 0
chr17:18246972|18247231 hsa-miR-6124 0 1 0
chr17:18246972|18247231 hsa-miR-9899 1 0 0
chr17:18246972|18247231 hsa-miR-9986 0 1 0
chr17:18246972|18247231 hsa-miR-4747-3p 1 0 0
chr17:18246972|18247231 hsa-miR-3194-3p 0 1 0
chr17:18246972|18247231 hsa-miR-4665-3p 1 0 0
chr17:18246972|18247231 hsa-miR-6836-3p 1 1 0
chr17:18246972|18247231 hsa-miR-6720-5p 1 0 0
chr17:18246972|18247231 hsa-miR-6820-5p 0 1 0
chr17:18246972|18247231 hsa-miR-296-5p 1 0 0
chr17:18246972|18247231 hsa-miR-3189-5p 1 0 0
chr17:18246972|18247231 hsa-let-7i-3p 1 1 0
chr17:18246972|18247231 hsa-miR-6787-3p 1 0 0
chr17:18246972|18247231 hsa-miR-4436b-5p 1 0 0
chr17:18246972|18247231 hsa-miR-6884-3p 1 0 0
chr17:18246972|18247231 hsa-miR-4763-5p 1 1 0
chr17:18246972|18247231 hsa-miR-7108-3p 1 1 0
chr17:18246972|18247231 hsa-miR-1247-5p 1 0 0
chr17:18246972|18247231 hsa-miR-6894-3p 0 1 0
chr17:18246972|18247231 hsa-miR-6803-3p 1 0 0
chr17:18246972|18247231 hsa-miR-4783-5p 0 1 0
chr17:18246972|18247231 hsa-miR-4717-3p 0 1 0
chr17:18246972|18247231 hsa-miR-194-3p 0 1 0
chr17:18246972|18247231 hsa-miR-6743-3p 1 0 0
chr17:18246972|18247231 hsa-miR-4758-3p 1 0 0
chr17:18246972|18247231 hsa-miR-6752-3p 1 1 0
chr17:18246972|18247231 hsa-miR-1295b-3p 0 1 0
chr17:18246972|18247231 hsa-miR-4632-3p 0 1 0
chr17:18246972|18247231 hsa-miR-7848-3p 1 0 0
chr17:18246972|18247231 hsa-miR-4749-3p 1 0 0
chr17:18246972|18247231 hsa-miR-6795-3p 0 1 0
chr17:18246972|18247231 hsa-miR-1292-3p 0 1 0
chr17:18246972|18247231 hsa-miR-6748-3p 0 1 0
chr17:18246972|18247231 hsa-miR-4433a-5p 1 0 0
chr17:18246972|18247231 hsa-miR-3173-5p 0 1 0
chr17:18246972|18247231 hsa-miR-1249-3p 1 0 0
chr17:18246972|18247231 hsa-miR-3162-3p 1 1 0
chr17:18246972|18247231 hsa-miR-5581-3p 0 1 0
chr17:18246972|18247231 hsa-miR-6875-5p 0 1 0
chr17:18246972|18247231 hsa-miR-10396a-3p 1 1 0
chr17:18246972|18247231 hsa-miR-10396b-3p 1 1 0
chr17:18246972|18247231 hsa-miR-6799-3p 1 0 0
chr17:18246972|18247231 hsa-miR-6756-3p 1 0 0
chr17:18246972|18247231 hsa-miR-6792-3p 0 1 0
chr17:18246972|18247231 hsa-miR-6862-3p 0 1 0
chr17:18246972|18247231 hsa-miR-10401-3p 1 1 0
chr17:18246972|18247231 hsa-miR-6805-3p 1 0 0
chr17:18246972|18247231 hsa-miR-6810-3p 0 1 0
chr17:18246972|18247231 hsa-miR-6775-3p 1 1 0
chr17:18246972|18247231 hsa-miR-10392-3p 1 1 0
chr17:18246972|18247231 hsa-miR-10394-5p 0 1 0
chr17:18246972|18247231 hsa-miR-4691-5p 1 0 0
chr17:18246972|18247231 hsa-miR-6876-3p 0 1 0
chr17:18246972|18247231 hsa-miR-6503-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:18246972|18247231
ORF Type ORF1
Protein Length 62
Nucleotide Length 189
Protein Sequence MKADLTALFLPRQPPMSLAEVGAGPGPGRGGGGGGQAEGGAYAQSALRPAAGRVPLTCRRSS
Nucleotide Sequence ATGAAGGCTGACCTCACTGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGGTGGGGGCAGGGCCGGGACCGGGGCGCGGGGGGGGGGGTGGGGGGCAGGCCGAGGGCGGGGCCTATGCGCAGAGCGCGCTCAGACCTGCCGCGGGGCGGGTCCCTCTCACCTGCAGGCGGAGCAGCTGA
CircID chr17:18246972|18247231
ORF Type ORF2
Protein Length 83
Nucleotide Length 249
Protein Sequence MTSLRFSCRGSRPCRWPRWGQGRDRGAGGGVGGRPRAGPMRRARSDLPRGGSLSPAGGAADGGVERRPRRHGGFRAGGQEVCA
Nucleotide Sequence CTGACCTCACTGCGCTTTTCCTGCCGCGGCAGCCGCCCATGTCGCTGGCCGAGGTGGGGGCAGGGCCGGGACCGGGGCGCGGGGGGGGGGGTGGGGGGCAGGCCGAGGGCGGGGCCTATGCGCAGAGCGCGCTCAGACCTGCCGCGGGGCGGGTCCCTCTCACCTGCAGGCGGAGCAGCTGATGGAGGAGTGGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCG
CircID chr17:18246972|18247231
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MQAEQLMEEWNEDLDGMEGFVLEGKKFAR
Nucleotide Sequence CTGCAGGCGGAGCAGCTGATGGAGGAGTGGAACGAAGACCTAGACGGCATGGAGGGTTTCGTGCTGGAGGGCAAGAAGTTTGCGCGG
CircID chr17:18246972|18247231
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MPSSTKPSMPSRSSFHSSISCSACR
Nucleotide Sequence TTGCCCTCCAGCACGAAACCCTCCATGCCGTCTAGGTCTTCGTTCCACTCCTCCATCAGCTGCTCCGCCTGCAGGTGA
CircID chr17:18246972|18247231
ORF Type ORF5
Protein Length 45
Nucleotide Length 135
Protein Sequence MRIGPALGLPPTPPPAPRSRPCPHLGQRHGRLPRQEKRSEVSLHL
Nucleotide Sequence CTGCGCATAGGCCCCGCCCTCGGCCTGCCCCCCACCCCCCCCCCCGCGCCCCGGTCCCGGCCCTGCCCCCACCTCGGCCAGCGACATGGGCGGCTGCCGCGGCAGGAAAAGCGCAGTGAGGTCAGCCTTCATCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab