CircRNA Information

General Information
circRNA Basic Information
CircID chr17:18247734|18247848
Strand -
CircType exon
Host Gene ENSG00000177731.14;
Algorism CIRI2;
Sequence CCAGCTTGAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACGTCGGACCAACAGTCCAGAATGTACACGCAGCGCGTGTCCAGCAGACTCTGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:18247734|18247848 hsa-miR-181c-5p 0 0 1
chr17:18247734|18247848 hsa-miR-181c-3p 0 0 1
chr17:18247734|18247848 hsa-miR-149-5p 0 0 1
chr17:18247734|18247848 hsa-miR-149-3p 0 0 1
chr17:18247734|18247848 hsa-miR-133b 0 0 1
chr17:18247734|18247848 hsa-miR-422a 0 1 1
chr17:18247734|18247848 hsa-miR-181d-5p 0 0 1
chr17:18247734|18247848 hsa-miR-181d-3p 0 0 1
chr17:18247734|18247848 hsa-miR-675-5p 0 0 1
chr17:18247734|18247848 hsa-miR-675-3p 0 0 1
chr17:18247734|18247848 hsa-miR-1206 0 0 1
chr17:18247734|18247848 hsa-miR-1287-5p 0 0 1
chr17:18247734|18247848 hsa-miR-1287-3p 0 0 1
chr17:18247734|18247848 hsa-miR-1299 0 0 1
chr17:18247734|18247848 hsa-miR-1288-5p 0 0 1
chr17:18247734|18247848 hsa-miR-1288-3p 0 0 1
chr17:18247734|18247848 hsa-miR-378 0 0 1
chr17:18247734|18247848 hsa-miR-1269 0 0 1
chr17:18247734|18247848 hsa-miR-181a 0 0 1
chr17:18247734|18247848 hsa-miR-181b 0 0 1
chr17:18247734|18247848 hsa-miR-516b 0 0 1
chr17:18247734|18247848 hsa-miR-133a 0 0 1
chr17:18247734|18247848 hsa-miR-346 1 0 0
chr17:18247734|18247848 hsa-miR-1205 0 1 0
chr17:18247734|18247848 hsa-miR-378c 0 1 0
chr17:18247734|18247848 hsa-miR-378h 0 1 0
chr17:18247734|18247848 hsa-miR-1587 1 0 0
chr17:18247734|18247848 hsa-miR-4686 1 0 0
chr17:18247734|18247848 hsa-miR-4741 1 0 0
chr17:18247734|18247848 hsa-miR-6860 1 0 0
chr17:18247734|18247848 hsa-miR-323a-5p 1 0 0
chr17:18247734|18247848 hsa-miR-4665-3p 1 1 0
chr17:18247734|18247848 hsa-miR-3692-5p 0 1 0
chr17:18247734|18247848 hsa-miR-3663-5p 1 0 0
chr17:18247734|18247848 hsa-miR-423-3p 0 1 0
chr17:18247734|18247848 hsa-miR-6765-3p 1 0 0
chr17:18247734|18247848 hsa-miR-6763-3p 1 0 0
chr17:18247734|18247848 hsa-miR-1908-3p 1 1 0
chr17:18247734|18247848 hsa-miR-4638-3p 1 1 0
chr17:18247734|18247848 hsa-miR-3678-3p 0 1 0
chr17:18247734|18247848 hsa-miR-4632-3p 0 1 0
chr17:18247734|18247848 hsa-miR-3126-3p 0 1 0
chr17:18247734|18247848 hsa-miR-5007-5p 0 1 0
chr17:18247734|18247848 hsa-miR-4520-5p 0 1 0
chr17:18247734|18247848 hsa-miR-3620-5p 1 0 0
chr17:18247734|18247848 hsa-miR-378a-3p 0 1 0
chr17:18247734|18247848 hsa-miR-10394-5p 0 1 0
chr17:18247734|18247848 hsa-miR-378d 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:18247734|18247848
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MRAAARTRRGDLRPSQMNTSDQQSRMYTQRVSSRLC
Nucleotide Sequence TTGAGGGCGGCAGCGCGCACCAGGCGCGGGGACTTGCGGCCGAGCCAGATGAACACGTCGGACCAACAGTCCAGAATGTACACGCAGCGCGTGTCCAGCAGACTCTGC

CircID chr17:18247734|18247848
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence LQSLLDTRCVYILDCWSDVFIWLGRKSPRLVRAAALKL
Nucleotide Sequence CTGCAGAGTCTGCTGGACACGCGCTGCGTGTACATTCTGGACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTCAAGCTG

CircID chr17:18247734|18247848
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MRVHSGLLVRRVHLARPQVPAPGARCRPQA
Nucleotide Sequence CTGCGTGTACATTCTGGACTGTTGGTCCGACGTGTTCATCTGGCTCGGCCGCAAGTCCCCGCGCCTGGTGCGCGCTGCCGCCCTCAAGCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites