CircRNA Information

General Information
circRNA Basic Information
CircID chr17:19336347|19336505
Strand +
CircType exon
Host Gene ENSG00000072134.14;
Algorism CIRI2;
Sequence ATGCACTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAGTGGCTGTCATGTTGGGGCCTCAAAGTCACATCATGAAAGACTCGTTACAAAAGAATCACTGACCCCAAGTAGTCGAGTCTAGTCTACTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:19336347|19336505 hsa-miR-134-5p 0 0 1
chr17:19336347|19336505 hsa-miR-134-3p 0 0 1
chr17:19336347|19336505 hsa-miR-433-5p 0 0 1
chr17:19336347|19336505 hsa-miR-433-3p 0 0 1
chr17:19336347|19336505 hsa-miR-411-5p 0 0 1
chr17:19336347|19336505 hsa-miR-411-3p 0 0 1
chr17:19336347|19336505 hsa-miR-890 0 0 1
chr17:19336347|19336505 hsa-miR-924 0 1 1
chr17:19336347|19336505 hsa-miR-936 0 0 1
chr17:19336347|19336505 hsa-miR-1304-5p 0 0 1
chr17:19336347|19336505 hsa-miR-1304-3p 0 0 1
chr17:19336347|19336505 hsa-miR-615-5p 0 0 1
chr17:19336347|19336505 hsa-miR-199b-3p 0 0 1
chr17:19336347|19336505 hsa-miR-199a-3p 0 0 1
chr17:19336347|19336505 hsa-miR-324-3p 0 0 1
chr17:19336347|19336505 hsa-miR-1182 1 0 0
chr17:19336347|19336505 hsa-miR-1913 0 1 0
chr17:19336347|19336505 hsa-miR-711 0 1 0
chr17:19336347|19336505 hsa-miR-3164 0 1 0
chr17:19336347|19336505 hsa-miR-4313 0 1 0
chr17:19336347|19336505 hsa-miR-4252 0 1 0
chr17:19336347|19336505 hsa-miR-3943 0 1 0
chr17:19336347|19336505 hsa-miR-5572 1 1 0
chr17:19336347|19336505 hsa-miR-9899 1 0 0
chr17:19336347|19336505 hsa-miR-12126 0 1 0
chr17:19336347|19336505 hsa-miR-15a-3p 0 1 0
chr17:19336347|19336505 hsa-miR-4665-3p 1 0 0
chr17:19336347|19336505 hsa-miR-1972 0 1 0
chr17:19336347|19336505 hsa-miR-6089 1 0 0
chr17:19336347|19336505 hsa-miR-3189-5p 1 1 0
chr17:19336347|19336505 hsa-miR-5008-5p 1 1 0
chr17:19336347|19336505 hsa-miR-2277-3p 1 0 0
chr17:19336347|19336505 hsa-miR-1908-3p 1 0 0
chr17:19336347|19336505 hsa-miR-7113-3p 0 1 0
chr17:19336347|19336505 hsa-miR-3614-5p 1 0 0
chr17:19336347|19336505 hsa-miR-6752-3p 0 1 0
chr17:19336347|19336505 hsa-miR-4529-5p 0 1 0
chr17:19336347|19336505 hsa-miR-6856-3p 0 1 0
chr17:19336347|19336505 hsa-miR-5699-5p 0 1 0
chr17:19336347|19336505 hsa-miR-4740-3p 0 1 0
chr17:19336347|19336505 hsa-miR-6801-3p 0 1 0
chr17:19336347|19336505 hsa-miR-6810-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:19336347|19336505
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MHSGWPVPEDGAGGCLLGSRWPSGCHVGASKSHHERLVTKESLTPSSRV
Nucleotide Sequence ATGCACTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAGTGGCTGTCATGTTGGGGCCTCAAAGTCACATCATGAAAGACTCGTTACAAAAGAATCACTGACCCCAAGTAGTCGAGTCTAG

CircID chr17:19336347|19336505
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MCQKMGQGAVFLGPGGPVAVMLGPQSHIMKDSLQKNH
Nucleotide Sequence CTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAGTGGCTGTCATGTTGGGGCCTCAAAGTCACATCATGAAAGACTCGTTACAAAAGAATCACTGA

CircID chr17:19336347|19336505
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MACARRWGRGLSSWVPVAQWLSCWGLKVTS
Nucleotide Sequence ATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAGTGGCTGTCATGTTGGGGCCTCAAAGTCACATCATGA

CircID chr17:19336347|19336505
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MTATGPPGPKKTAPCPIFWHRPSRVH
Nucleotide Sequence ATGACAGCCACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGTGCAT

CircID chr17:19336347|19336505
ORF Type ORF5
Protein Length 30
Nucleotide Length 90
Protein Sequence MRPQHDSHWATGTQEDSPLPHLLAQAIPSA
Nucleotide Sequence TTGAGGCCCCAACATGACAGCCACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGTGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites