CircRNA Information

General Information
circRNA Basic Information
CircID chr17:19676807|19676933
Strand +
CircType exon
Host Gene ENSG00000072210.17;
Algorism CIRI2;
Sequence CATCCACCATCTGTCTGCCCCATGATGCTCTCAAACCCCAAAGTCCTAATATCCCAGGCCTCTTTGTCTGTGAGAGGAAATGGTTCCCTCACTTTAAGTTCTGTAGGCTAATCAGAAAGGGATCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:19676807|19676933 hsa-miR-17-5p 0 0 1
chr17:19676807|19676933 hsa-miR-17-3p 0 0 1
chr17:19676807|19676933 hsa-miR-20a-5p 0 0 1
chr17:19676807|19676933 hsa-miR-20a-3p 0 0 1
chr17:19676807|19676933 hsa-miR-93-5p 0 0 1
chr17:19676807|19676933 hsa-miR-93-3p 0 0 1
chr17:19676807|19676933 hsa-miR-106a-5p 0 0 1
chr17:19676807|19676933 hsa-miR-106a-3p 0 0 1
chr17:19676807|19676933 hsa-miR-204-5p 0 0 1
chr17:19676807|19676933 hsa-miR-204-3p 0 0 1
chr17:19676807|19676933 hsa-miR-211-5p 0 0 1
chr17:19676807|19676933 hsa-miR-211-3p 0 0 1
chr17:19676807|19676933 hsa-miR-106b-5p 0 0 1
chr17:19676807|19676933 hsa-miR-106b-3p 0 0 1
chr17:19676807|19676933 hsa-miR-20b-5p 0 0 1
chr17:19676807|19676933 hsa-miR-20b-3p 0 0 1
chr17:19676807|19676933 hsa-miR-519d-5p 0 0 1
chr17:19676807|19676933 hsa-miR-519d-3p 0 0 1
chr17:19676807|19676933 hsa-miR-583 0 0 1
chr17:19676807|19676933 hsa-miR-661 0 0 1
chr17:19676807|19676933 hsa-miR-1238-5p 0 0 1
chr17:19676807|19676933 hsa-miR-1238-3p 0 0 1
chr17:19676807|19676933 hsa-miR-1324 0 0 1
chr17:19676807|19676933 hsa-miR-486-3p 0 0 1
chr17:19676807|19676933 hsa-miR-188-5p 0 0 1
chr17:19676807|19676933 hsa-miR-342-3p 0 0 1
chr17:19676807|19676933 hsa-miR-1308 0 0 1
chr17:19676807|19676933 hsa-miR-600 0 1 0
chr17:19676807|19676933 hsa-miR-762 1 0 0
chr17:19676807|19676933 hsa-miR-2861 1 0 0
chr17:19676807|19676933 hsa-miR-3147 1 0 0
chr17:19676807|19676933 hsa-miR-3170 1 1 0
chr17:19676807|19676933 hsa-miR-4462 1 0 0
chr17:19676807|19676933 hsa-miR-4488 1 0 0
chr17:19676807|19676933 hsa-miR-4688 1 0 0
chr17:19676807|19676933 hsa-miR-5090 1 0 0
chr17:19676807|19676933 hsa-miR-5572 1 0 0
chr17:19676807|19676933 hsa-miR-8055 1 0 0
chr17:19676807|19676933 hsa-miR-12119 1 0 0
chr17:19676807|19676933 hsa-miR-12125 0 1 0
chr17:19676807|19676933 hsa-miR-6734-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6765-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6728-5p 1 1 0
chr17:19676807|19676933 hsa-miR-1227-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6089 1 0 0
chr17:19676807|19676933 hsa-miR-6890-5p 1 0 0
chr17:19676807|19676933 hsa-miR-3622b-5p 1 0 0
chr17:19676807|19676933 hsa-miR-3151-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6796-5p 1 0 0
chr17:19676807|19676933 hsa-miR-4753-3p 0 1 0
chr17:19676807|19676933 hsa-miR-5008-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6852-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6835-5p 1 0 0
chr17:19676807|19676933 hsa-miR-1226-5p 1 0 0
chr17:19676807|19676933 hsa-miR-193b-5p 1 1 0
chr17:19676807|19676933 hsa-miR-4640-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6749-5p 1 0 0
chr17:19676807|19676933 hsa-miR-3616-3p 1 1 0
chr17:19676807|19676933 hsa-miR-423-5p 1 0 0
chr17:19676807|19676933 hsa-miR-4750-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6767-5p 0 1 0
chr17:19676807|19676933 hsa-miR-6812-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6743-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6819-5p 1 0 0
chr17:19676807|19676933 hsa-miR-7107-5p 1 0 0
chr17:19676807|19676933 hsa-miR-10401-5p 1 0 0
chr17:19676807|19676933 hsa-miR-328-5p 1 0 0
chr17:19676807|19676933 hsa-miR-4632-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6846-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6848-5p 1 0 0
chr17:19676807|19676933 hsa-miR-365a-5p 1 0 0
chr17:19676807|19676933 hsa-miR-365b-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6855-5p 1 1 0
chr17:19676807|19676933 hsa-miR-4646-5p 1 0 0
chr17:19676807|19676933 hsa-miR-6822-5p 0 1 0
chr17:19676807|19676933 hsa-miR-3059-5p 0 1 0
chr17:19676807|19676933 hsa-miR-6506-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:19676807|19676933
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MMLSNPKVLISQASLSVRGNGSLTLSSVG
Nucleotide Sequence ATGATGCTCTCAAACCCCAAAGTCCTAATATCCCAGGCCTCTTTGTCTGTGAGAGGAAATGGTTCCCTCACTTTAAGTTCTGTAGGCTAA
CircID chr17:19676807|19676933
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MPHDALKPQSPNIPGLFVCERKWFPHFKFCRLIRKGS
Nucleotide Sequence CTGCCCCATGATGCTCTCAAACCCCAAAGTCCTAATATCCCAGGCCTCTTTGTCTGTGAGAGGAAATGGTTCCCTCACTTTAAGTTCTGTAGGCTAATCAGAAAGGGATCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab