CircRNA Information

General Information
circRNA Basic Information
CircID chr17:19825094|19845377
Strand -
CircType exon
Host Gene ENSG00000083290.19;
Algorism find_circ;CIRI2;DCC;
Sequence CGGATTTTGGTTTTGCTCGTTACCTACATAGTAACATGATGGCTGCAACACTGTGTGGATCCCCGATGTACATGGCTCCTGAGGTTATTATGTCTCAACATTATGATGCTAAGGCTGACTTGTGGAGCATAGGAACAGTGATATACCAATGCCTAGTTGGAAAACCACCTTTTCAGGCCAATAGTCCTCAAGACTTAAGGATGTTTTATGAAAAAAACAGGAGCTTAATGCCTAGTTAATATGAGAGGTTAAATGTTTGATCCAATTTTCCTTCCCGGATAAGTTTTTCTTTTCTATCCATGTCAGTTTTGAAAACACAATACCAGAAGAAGAGGGGCCCAAATGCACACAGAGCGCCCAAGAGTGAGTTTTTAGGAGTGGGTCTGAAATTAGGATAGACATTTGCTGATCTTGCATAGGTCCAACGAATCAAGGCAGGATCTTCGATGAGCCCTCTGCGGTTGGGGTTGTTGTACTGAAGCAGGTACTCTCATTTCAGCCCGGCTCTTATGGCCAACTGCTCAACTTGCGCCCGTCGGGTGTCCGGAGATATGTTGTATTCGGCTGGGTTGAGGGTCGGGGGCACAGTGGCCAGGCGTGATAGAGTATACTTTGGGAACGACATTATTCCCAGAGAAACATCACCTTATTTGGCTAATCTCCTTTTGGGTTTGCTTCAGAGAAACCAAAAAGATAGAATGGACTTTGAAGCATTTTTTAGCCATCCTTTTCTTGAGCAAGGTCCAGTAAAAAAATCTTGCCCAGTTCCAGTGCCCATGTATTCTGGTTCTGTCTCTGGAAGCTCCTGTGGCAGCTCTCCATCTTGTCGTTTTGCTTCTCCACCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:19825094|19845377 hsa-miR-663b 1 1 1
chr17:19825094|19845377 hsa-miR-1286 1 1 1
chr17:19825094|19845377 hsa-miR-3911 1 1 1
chr17:19825094|19845377 hsa-miR-3978 1 1 1
chr17:19825094|19845377 hsa-miR-4660 1 1 1
chr17:19825094|19845377 hsa-miR-4669 1 1 1
chr17:19825094|19845377 hsa-miR-4734 1 1 1
chr17:19825094|19845377 hsa-miR-4752 1 1 1
chr17:19825094|19845377 hsa-miR-5194 1 1 1
chr17:19825094|19845377 hsa-miR-5572 1 1 1
chr17:19825094|19845377 hsa-miR-6081 1 1 1
chr17:19825094|19845377 hsa-miR-6165 1 1 1
chr17:19825094|19845377 hsa-miR-105-5p 1 1 1
chr17:19825094|19845377 hsa-miR-4435 1 1 1
chr17:19825094|19845377 hsa-miR-4433b-3p 1 1 1
chr17:19825094|19845377 hsa-miR-92a-1-5p 1 1 1
chr17:19825094|19845377 hsa-miR-128-1-5p 1 1 1
chr17:19825094|19845377 hsa-miR-223-3p 1 1 1
chr17:19825094|19845377 hsa-miR-4433a-3p 1 1 1
chr17:19825094|19845377 hsa-miR-6833-5p 1 1 1
chr17:19825094|19845377 hsa-miR-1236-5p 1 1 1
chr17:19825094|19845377 hsa-miR-7114-5p 1 1 1
chr17:19825094|19845377 hsa-miR-4722-5p 1 1 1
chr17:19825094|19845377 hsa-miR-3677-5p 1 1 1
chr17:19825094|19845377 hsa-miR-4755-3p 1 1 1
chr17:19825094|19845377 hsa-miR-6762-3p 1 1 1
chr17:19825094|19845377 hsa-miR-6727-5p 1 1 1
chr17:19825094|19845377 hsa-miR-6768-5p 1 1 1
chr17:19825094|19845377 hsa-miR-6748-5p 1 1 1
chr17:19825094|19845377 hsa-miR-6772-5p 1 1 1
chr17:19825094|19845377 hsa-miR-6793-5p 1 1 1
chr17:19825094|19845377 hsa-miR-30b-3p 1 1 1
chr17:19825094|19845377 hsa-miR-1226-5p 1 1 1
chr17:19825094|19845377 hsa-miR-4787-5p 1 1 1
chr17:19825094|19845377 hsa-miR-216a-3p 1 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr17:19825094|19845377 MOV10 0 0 1
chr17:19825094|19845377 ELAVL1 0 0 1
chr17:19825094|19845377 DDX54 0 0 2
chr17:19825094|19845377 CSTF2 0 0 1
chr17:19825094|19845377 FUS 1 0 0
chr17:19825094|19845377 TAF15 0 1 0
chr17:19825094|19845377 DKC1 0 1 0
chr17:19825094|19845377 NOP58 1 0 0
chr17:19825094|19845377 PTBP1 0 0 1
chr17:19825094|19845377 EWSR1 1 0 0
chr17:19825094|19845377 EIF4A3 1 0 4
chr17:19825094|19845377 AGO2 1 0 1