CircRNA Information

General Information
circRNA Basic Information
CircID chr17:2042685|2042848
Strand +
CircType exon
Host Gene ENSG00000108963.16;
Algorism CIRI2;
Sequence CGTGGCAAGGGGAAGCGGGGATCGCCTGCCTGGCCCAGGGCACACACAAGGGCTGCTAGCGCAGCCCCTTGGCTGAAACCAAGAAGGCCGTCAAAAGGCCCCAGCCTGTTCAGTGCCTGTGCCACCATCCCCAGTGATTCCTCCAGGCCCCTGCAGACGGCGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:2042685|2042848 hsa-miR-15a-5p 0 0 1
chr17:2042685|2042848 hsa-miR-15a-3p 0 0 1
chr17:2042685|2042848 hsa-miR-15b-5p 0 0 1
chr17:2042685|2042848 hsa-miR-15b-3p 0 0 1
chr17:2042685|2042848 hsa-miR-195-5p 0 0 1
chr17:2042685|2042848 hsa-miR-195-3p 0 0 1
chr17:2042685|2042848 hsa-miR-34b-5p 0 0 1
chr17:2042685|2042848 hsa-miR-34b-3p 0 0 1
chr17:2042685|2042848 hsa-miR-424-5p 0 0 1
chr17:2042685|2042848 hsa-miR-424-3p 0 0 1
chr17:2042685|2042848 hsa-miR-497-5p 0 0 1
chr17:2042685|2042848 hsa-miR-497-3p 0 0 1
chr17:2042685|2042848 hsa-miR-503-5p 0 0 1
chr17:2042685|2042848 hsa-miR-503-3p 0 0 1
chr17:2042685|2042848 hsa-miR-581 0 1 1
chr17:2042685|2042848 hsa-miR-604 0 0 1
chr17:2042685|2042848 hsa-miR-621 0 0 1
chr17:2042685|2042848 hsa-miR-646 0 0 1
chr17:2042685|2042848 hsa-miR-765 0 0 1
chr17:2042685|2042848 hsa-miR-874-5p 0 0 1
chr17:2042685|2042848 hsa-miR-874-3p 0 0 1
chr17:2042685|2042848 hsa-miR-940 1 1 1
chr17:2042685|2042848 hsa-miR-1205 0 0 1
chr17:2042685|2042848 hsa-miR-1248 0 1 1
chr17:2042685|2042848 hsa-miR-146b-3p 0 0 1
chr17:2042685|2042848 hsa-miR-1184 0 0 1
chr17:2042685|2042848 hsa-miR-16 0 0 1
chr17:2042685|2042848 hsa-miR-1254 0 0 1
chr17:2042685|2042848 hsa-miR-129-3p 0 0 1
chr17:2042685|2042848 hsa-miR-147 0 0 1
chr17:2042685|2042848 hsa-miR-637 1 0 0
chr17:2042685|2042848 hsa-miR-762 1 0 0
chr17:2042685|2042848 hsa-miR-1268a 1 0 0
chr17:2042685|2042848 hsa-miR-2861 1 1 0
chr17:2042685|2042848 hsa-miR-1193 0 1 0
chr17:2042685|2042848 hsa-miR-3197 1 0 0
chr17:2042685|2042848 hsa-miR-4298 1 0 0
chr17:2042685|2042848 hsa-miR-4269 0 1 0
chr17:2042685|2042848 hsa-miR-4292 0 1 0
chr17:2042685|2042848 hsa-miR-3654 0 1 0
chr17:2042685|2042848 hsa-miR-1268b 1 0 0
chr17:2042685|2042848 hsa-miR-4486 1 0 0
chr17:2042685|2042848 hsa-miR-4505 1 0 0
chr17:2042685|2042848 hsa-miR-4525 1 0 0
chr17:2042685|2042848 hsa-miR-3960 1 0 0
chr17:2042685|2042848 hsa-miR-4656 1 0 0
chr17:2042685|2042848 hsa-miR-4673 0 1 0
chr17:2042685|2042848 hsa-miR-4688 1 0 0
chr17:2042685|2042848 hsa-miR-4721 1 0 0
chr17:2042685|2042848 hsa-miR-5787 1 1 0
chr17:2042685|2042848 hsa-miR-6069 1 0 0
chr17:2042685|2042848 hsa-miR-6085 1 1 0
chr17:2042685|2042848 hsa-miR-6132 1 0 0
chr17:2042685|2042848 hsa-miR-8089 1 1 0
chr17:2042685|2042848 hsa-miR-150-3p 1 0 0
chr17:2042685|2042848 hsa-miR-128-1-5p 1 0 0
chr17:2042685|2042848 hsa-miR-3157-5p 0 1 0
chr17:2042685|2042848 hsa-miR-6747-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6894-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6857-5p 1 1 0
chr17:2042685|2042848 hsa-miR-29b-2-5p 0 1 0
chr17:2042685|2042848 hsa-miR-6510-5p 1 0 0
chr17:2042685|2042848 hsa-miR-766-5p 1 1 0
chr17:2042685|2042848 hsa-miR-3622a-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6757-5p 1 0 0
chr17:2042685|2042848 hsa-miR-4695-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6721-5p 1 0 0
chr17:2042685|2042848 hsa-miR-4655-5p 1 0 0
chr17:2042685|2042848 hsa-miR-191-3p 0 1 0
chr17:2042685|2042848 hsa-miR-432-5p 1 1 0
chr17:2042685|2042848 hsa-miR-185-3p 0 1 0
chr17:2042685|2042848 hsa-miR-6732-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6798-5p 1 1 0
chr17:2042685|2042848 hsa-miR-939-3p 1 0 0
chr17:2042685|2042848 hsa-miR-4640-5p 1 1 0
chr17:2042685|2042848 hsa-miR-6771-5p 1 0 0
chr17:2042685|2042848 hsa-miR-4690-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6749-5p 1 0 0
chr17:2042685|2042848 hsa-miR-4787-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6789-5p 1 0 0
chr17:2042685|2042848 hsa-miR-4724-5p 0 1 0
chr17:2042685|2042848 hsa-miR-4763-3p 1 0 0
chr17:2042685|2042848 hsa-miR-6787-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6816-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6743-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6752-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6756-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6803-5p 1 1 0
chr17:2042685|2042848 hsa-miR-6813-5p 1 1 0
chr17:2042685|2042848 hsa-miR-6851-5p 1 0 0
chr17:2042685|2042848 hsa-miR-7107-5p 1 0 0
chr17:2042685|2042848 hsa-miR-11181-3p 1 0 0
chr17:2042685|2042848 hsa-miR-1249-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6722-3p 1 1 0
chr17:2042685|2042848 hsa-miR-6751-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6763-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6774-5p 1 1 0
chr17:2042685|2042848 hsa-miR-6797-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6836-5p 1 0 0
chr17:2042685|2042848 hsa-miR-1909-3p 1 1 0
chr17:2042685|2042848 hsa-miR-6846-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6848-5p 1 0 0
chr17:2042685|2042848 hsa-miR-4697-5p 1 0 0
chr17:2042685|2042848 hsa-miR-1914-3p 1 0 0
chr17:2042685|2042848 hsa-miR-3116 0 1 0
chr17:2042685|2042848 hsa-miR-7151-3p 0 1 0
chr17:2042685|2042848 hsa-miR-4700-5p 1 1 0
chr17:2042685|2042848 hsa-miR-6750-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6791-5p 1 1 0
chr17:2042685|2042848 hsa-miR-6762-5p 1 0 0
chr17:2042685|2042848 hsa-miR-6805-3p 1 0 0
chr17:2042685|2042848 hsa-miR-10394-5p 0 1 0
chr17:2042685|2042848 hsa-miR-6715b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr17:2042685|2042848
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MKPRRPSKGPSLFSACATIPSDSSRPLQTA
Nucleotide Sequence CTGAAACCAAGAAGGCCGTCAAAAGGCCCCAGCCTGTTCAGTGCCTGTGCCACCATCCCCAGTGATTCCTCCAGGCCCCTGCAGACGGCG
CircID chr17:2042685|2042848
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCALGQAGDPRFPLP
Nucleotide Sequence CTGGAGGAATCACTGGGGATGGTGGCACAGGCACTGAACAGGCTGGGGCCTTTTGACGGCCTTCTTGGTTTCAGCCAAGGGGCTGCGCTAGCAGCCCTTGTGTGTGCCCTGGGCCAGGCAGGCGATCCCCGCTTCCCCTTGCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab