CircRNA Information

General Information
circRNA Basic Information
CircID chr17:2059451|2059611
Strand -
CircType exon
Host Gene ENSG00000177374.11;
Algorism CIRI2;
Sequence CACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGGACCATATTTATTGCATGCGCCCCGGCGGCCCCCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:2059451|2059611 hsa-miR-381-5p 0 0 1
chr17:2059451|2059611 hsa-miR-381-3p 0 0 1
chr17:2059451|2059611 hsa-miR-583 0 0 1
chr17:2059451|2059611 hsa-miR-610 0 0 1
chr17:2059451|2059611 hsa-miR-631 0 0 1
chr17:2059451|2059611 hsa-miR-661 0 1 1
chr17:2059451|2059611 hsa-miR-300 0 0 1
chr17:2059451|2059611 hsa-miR-920 0 1 1
chr17:2059451|2059611 hsa-miR-1276 0 0 1
chr17:2059451|2059611 hsa-miR-1321 0 0 1
chr17:2059451|2059611 hsa-miR-769-5p 0 0 1
chr17:2059451|2059611 hsa-miR-637 1 0 0
chr17:2059451|2059611 hsa-miR-638 1 0 0
chr17:2059451|2059611 hsa-miR-650 1 0 0
chr17:2059451|2059611 hsa-miR-663a 1 0 0
chr17:2059451|2059611 hsa-miR-658 1 0 0
chr17:2059451|2059611 hsa-miR-762 1 0 0
chr17:2059451|2059611 hsa-miR-1270 1 0 0
chr17:2059451|2059611 hsa-miR-1275 1 0 0
chr17:2059451|2059611 hsa-miR-3141 1 0 0
chr17:2059451|2059611 hsa-miR-3154 1 0 0
chr17:2059451|2059611 hsa-miR-3196 1 0 0
chr17:2059451|2059611 hsa-miR-4270 1 0 0
chr17:2059451|2059611 hsa-miR-4271 1 0 0
chr17:2059451|2059611 hsa-miR-4281 1 0 0
chr17:2059451|2059611 hsa-miR-3621 1 0 0
chr17:2059451|2059611 hsa-miR-3646 1 0 0
chr17:2059451|2059611 hsa-miR-3918 1 0 0
chr17:2059451|2059611 hsa-miR-378g 0 1 0
chr17:2059451|2059611 hsa-miR-3135b 1 0 0
chr17:2059451|2059611 hsa-miR-4466 1 0 0
chr17:2059451|2059611 hsa-miR-4488 1 0 0
chr17:2059451|2059611 hsa-miR-4498 1 0 0
chr17:2059451|2059611 hsa-miR-4508 1 0 0
chr17:2059451|2059611 hsa-miR-4525 1 0 0
chr17:2059451|2059611 hsa-miR-4533 1 0 0
chr17:2059451|2059611 hsa-miR-4644 1 0 0
chr17:2059451|2059611 hsa-miR-4651 1 0 0
chr17:2059451|2059611 hsa-miR-4674 0 1 0
chr17:2059451|2059611 hsa-miR-4688 1 0 0
chr17:2059451|2059611 hsa-miR-4706 1 1 0
chr17:2059451|2059611 hsa-miR-4721 1 0 0
chr17:2059451|2059611 hsa-miR-4739 1 1 0
chr17:2059451|2059611 hsa-miR-4779 1 1 0
chr17:2059451|2059611 hsa-miR-4784 1 0 0
chr17:2059451|2059611 hsa-miR-5090 1 0 0
chr17:2059451|2059611 hsa-miR-5685 0 1 0
chr17:2059451|2059611 hsa-miR-5698 1 0 0
chr17:2059451|2059611 hsa-miR-5739 1 0 0
chr17:2059451|2059611 hsa-miR-5787 1 0 0
chr17:2059451|2059611 hsa-miR-6085 1 0 0
chr17:2059451|2059611 hsa-miR-6090 1 0 0
chr17:2059451|2059611 hsa-miR-6127 1 1 0
chr17:2059451|2059611 hsa-miR-6130 1 0 0
chr17:2059451|2059611 hsa-miR-6132 1 0 0
chr17:2059451|2059611 hsa-miR-6133 1 0 0
chr17:2059451|2059611 hsa-miR-7515 0 1 0
chr17:2059451|2059611 hsa-miR-7704 1 0 0
chr17:2059451|2059611 hsa-miR-8072 1 0 0
chr17:2059451|2059611 hsa-miR-8085 1 0 0
chr17:2059451|2059611 hsa-miR-8089 1 0 0
chr17:2059451|2059611 hsa-miR-9899 1 0 0
chr17:2059451|2059611 hsa-miR-9901 1 0 0
chr17:2059451|2059611 hsa-miR-211-3p 1 0 0
chr17:2059451|2059611 hsa-miR-128-1-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6734-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4731-5p 1 0 0
chr17:2059451|2059611 hsa-miR-323a-5p 1 0 0
chr17:2059451|2059611 hsa-miR-7106-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6825-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6894-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6720-5p 0 1 0
chr17:2059451|2059611 hsa-miR-125a-3p 1 0 0
chr17:2059451|2059611 hsa-miR-6799-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6510-5p 0 1 0
chr17:2059451|2059611 hsa-miR-6728-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6757-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6873-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4695-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4709-3p 1 0 0
chr17:2059451|2059611 hsa-miR-6727-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6721-5p 1 0 0
chr17:2059451|2059611 hsa-miR-3605-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6716-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1292-5p 1 0 0
chr17:2059451|2059611 hsa-miR-3180-3p 1 0 0
chr17:2059451|2059611 hsa-miR-6829-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6805-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6827-5p 1 0 0
chr17:2059451|2059611 hsa-miR-3126-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6782-5p 1 0 0
chr17:2059451|2059611 hsa-miR-615-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6786-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6835-5p 1 0 0
chr17:2059451|2059611 hsa-miR-7109-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1226-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4707-3p 1 0 0
chr17:2059451|2059611 hsa-miR-204-3p 1 0 0
chr17:2059451|2059611 hsa-miR-1908-3p 1 0 0
chr17:2059451|2059611 hsa-miR-6784-5p 1 1 0
chr17:2059451|2059611 hsa-miR-92b-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6749-5p 1 0 0
chr17:2059451|2059611 hsa-miR-3202 0 1 0
chr17:2059451|2059611 hsa-miR-3648 1 0 0
chr17:2059451|2059611 hsa-miR-149-3p 1 1 0
chr17:2059451|2059611 hsa-miR-6830-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6824-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6789-5p 1 0 0
chr17:2059451|2059611 hsa-miR-3162-5p 0 1 0
chr17:2059451|2059611 hsa-miR-6886-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6781-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6877-5p 1 0 0
chr17:2059451|2059611 hsa-miR-423-5p 1 0 0
chr17:2059451|2059611 hsa-miR-654-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1207-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1233-5p 1 1 0
chr17:2059451|2059611 hsa-miR-4763-3p 1 0 0
chr17:2059451|2059611 hsa-miR-6778-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6787-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6816-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6870-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6775-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1343-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6726-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6743-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6754-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6756-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6769a-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6803-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6813-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6842-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6851-5p 1 0 0
chr17:2059451|2059611 hsa-miR-11181-3p 1 0 0
chr17:2059451|2059611 hsa-miR-1249-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6722-3p 1 0 0
chr17:2059451|2059611 hsa-miR-6751-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6779-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6780a-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6797-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6808-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6879-5p 1 0 0
chr17:2059451|2059611 hsa-miR-7111-5p 1 0 0
chr17:2059451|2059611 hsa-miR-3620-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4728-5p 1 1 0
chr17:2059451|2059611 hsa-miR-5196-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6780b-5p 1 0 0
chr17:2059451|2059611 hsa-miR-10396b-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1237-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1909-3p 1 0 0
chr17:2059451|2059611 hsa-miR-328-5p 1 1 0
chr17:2059451|2059611 hsa-miR-4632-5p 1 1 0
chr17:2059451|2059611 hsa-miR-4725-3p 1 0 0
chr17:2059451|2059611 hsa-miR-4745-5p 1 1 0
chr17:2059451|2059611 hsa-miR-4749-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6738-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6795-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6846-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6848-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6858-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6883-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6887-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4697-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4723-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6885-5p 1 1 0
chr17:2059451|2059611 hsa-miR-939-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1238-5p 0 1 0
chr17:2059451|2059611 hsa-miR-10394-3p 1 0 0
chr17:2059451|2059611 hsa-miR-4633-3p 0 1 0
chr17:2059451|2059611 hsa-miR-6731-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6758-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6856-5p 1 0 0
chr17:2059451|2059611 hsa-miR-1914-3p 1 0 0
chr17:2059451|2059611 hsa-miR-4665-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4646-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4747-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6876-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6891-5p 1 0 0
chr17:2059451|2059611 hsa-miR-541-3p 1 0 0
chr17:2059451|2059611 hsa-miR-6750-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6766-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6785-5p 1 1 0
chr17:2059451|2059611 hsa-miR-4667-5p 1 0 0
chr17:2059451|2059611 hsa-miR-3184-5p 1 0 0
chr17:2059451|2059611 hsa-miR-5591-5p 1 1 0
chr17:2059451|2059611 hsa-miR-6724-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6791-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6762-5p 1 0 0
chr17:2059451|2059611 hsa-miR-10400-3p 0 1 0
chr17:2059451|2059611 hsa-miR-6837-5p 1 0 0
chr17:2059451|2059611 hsa-miR-6500-5p 1 0 0
chr17:2059451|2059611 hsa-miR-4690-3p 0 1 0
chr17:2059451|2059611 hsa-miR-128-2-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:2059451|2059611
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MHAPRRPPIPSPGWAGLERGLFSSLLFVCIFP
Nucleotide Sequence TTGCATGCGCCCCGGCGGCCCCCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCT
CircID chr17:2059451|2059611
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MRPGGPPSRAQAGLGWNAVSLAPSSSFVYFL
Nucleotide Sequence ATGCGCCCCGGCGGCCCCCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTA
CircID chr17:2059451|2059611
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MRPRTIFIACAPAAPHPEPRLGWAGTRSL
Nucleotide Sequence CTGCGGCCCCGGACCATATTTATTGCATGCGCCCCGGCGGCCCCCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAG
CircID chr17:2059451|2059611
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MGGRRGACNKYGPGPQGREGRAPREWETW
Nucleotide Sequence ATGGGGGGCCGCCGGGGCGCATGCAATAAATATGGTCCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGG
CircID chr17:2059451|2059611
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MGSGWGAAGAHAINMVRGRREGKGGHRGSGRPG
Nucleotide Sequence CTGGGCTCGGGATGGGGGGCCGCCGGGGCGCATGCAATAAATATGGTCCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab