CircRNA Information

General Information
circRNA Basic Information
CircID chr17:20981752|20981885
Strand -
CircType exon
Host Gene ENSG00000233098.7;
Algorism CIRI2;
Sequence CTCTTATCCCTCCACCTTCCTGCTCTGGCCACACTGCCTCCTTTCAGTGTCGAACATGCCATGTTCTTCCCTGCCTCGGGTTCTTTGCACATGTTGTTCCCGCTGCCTGGAATGCATGCTCTCTATCATCTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:20981752|20981885 hsa-miR-19a-5p 0 0 1
chr17:20981752|20981885 hsa-miR-19a-3p 0 0 1
chr17:20981752|20981885 hsa-miR-34a-5p 0 0 1
chr17:20981752|20981885 hsa-miR-34a-3p 0 0 1
chr17:20981752|20981885 hsa-miR-449a 0 0 1
chr17:20981752|20981885 hsa-miR-488-5p 0 0 1
chr17:20981752|20981885 hsa-miR-488-3p 0 0 1
chr17:20981752|20981885 hsa-miR-527 0 0 1
chr17:20981752|20981885 hsa-miR-586 0 0 1
chr17:20981752|20981885 hsa-miR-650 1 1 1
chr17:20981752|20981885 hsa-miR-449b-5p 0 0 1
chr17:20981752|20981885 hsa-miR-449b-3p 0 0 1
chr17:20981752|20981885 hsa-miR-940 0 0 1
chr17:20981752|20981885 hsa-miR-663b 0 0 1
chr17:20981752|20981885 hsa-miR-1827 0 0 1
chr17:20981752|20981885 hsa-miR-885-3p 1 1 1
chr17:20981752|20981885 hsa-miR-1207-5p 1 1 1
chr17:20981752|20981885 hsa-miR-34c-5p 1 1 1
chr17:20981752|20981885 hsa-miR-518a-5p 0 0 1
chr17:20981752|20981885 hsa-miR-548b-3p 0 0 1
chr17:20981752|20981885 hsa-miR-644 0 0 1
chr17:20981752|20981885 hsa-miR-19b 0 0 1
chr17:20981752|20981885 hsa-miR-198 1 0 0
chr17:20981752|20981885 hsa-miR-644a 1 0 0
chr17:20981752|20981885 hsa-miR-648 1 0 0
chr17:20981752|20981885 hsa-miR-1183 1 0 0
chr17:20981752|20981885 hsa-miR-1203 1 0 0
chr17:20981752|20981885 hsa-miR-3132 1 0 0
chr17:20981752|20981885 hsa-miR-3138 1 0 0
chr17:20981752|20981885 hsa-miR-3147 1 0 0
chr17:20981752|20981885 hsa-miR-3185 1 0 0
chr17:20981752|20981885 hsa-miR-4302 1 1 0
chr17:20981752|20981885 hsa-miR-4270 1 0 0
chr17:20981752|20981885 hsa-miR-3911 1 0 0
chr17:20981752|20981885 hsa-miR-3918 1 0 0
chr17:20981752|20981885 hsa-miR-3937 0 1 0
chr17:20981752|20981885 hsa-miR-4436a 1 0 0
chr17:20981752|20981885 hsa-miR-4468 1 0 0
chr17:20981752|20981885 hsa-miR-4476 0 1 0
chr17:20981752|20981885 hsa-miR-4514 1 0 0
chr17:20981752|20981885 hsa-miR-4533 1 0 0
chr17:20981752|20981885 hsa-miR-3960 1 0 0
chr17:20981752|20981885 hsa-miR-3978 1 0 0
chr17:20981752|20981885 hsa-miR-4669 1 0 0
chr17:20981752|20981885 hsa-miR-4692 1 1 0
chr17:20981752|20981885 hsa-miR-4706 1 1 0
chr17:20981752|20981885 hsa-miR-4739 1 1 0
chr17:20981752|20981885 hsa-miR-5090 1 0 0
chr17:20981752|20981885 hsa-miR-6081 1 0 0
chr17:20981752|20981885 hsa-miR-6086 1 0 0
chr17:20981752|20981885 hsa-miR-6127 1 0 0
chr17:20981752|20981885 hsa-miR-6133 1 0 0
chr17:20981752|20981885 hsa-miR-6165 1 1 0
chr17:20981752|20981885 hsa-miR-6860 1 0 0
chr17:20981752|20981885 hsa-miR-8072 1 0 0
chr17:20981752|20981885 hsa-miR-8073 1 0 0
chr17:20981752|20981885 hsa-miR-12114 0 1 0
chr17:20981752|20981885 hsa-miR-12118 0 1 0
chr17:20981752|20981885 hsa-miR-12120 1 1 0
chr17:20981752|20981885 hsa-miR-4435 1 1 0
chr17:20981752|20981885 hsa-miR-6747-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4433a-3p 1 0 0
chr17:20981752|20981885 hsa-miR-6765-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6510-5p 1 1 0
chr17:20981752|20981885 hsa-miR-1227-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6089 1 0 0
chr17:20981752|20981885 hsa-miR-6880-5p 0 1 0
chr17:20981752|20981885 hsa-miR-7847-3p 0 1 0
chr17:20981752|20981885 hsa-miR-4695-5p 1 1 0
chr17:20981752|20981885 hsa-miR-4722-5p 1 0 0
chr17:20981752|20981885 hsa-miR-3677-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6730-5p 0 1 0
chr17:20981752|20981885 hsa-miR-6721-5p 1 0 0
chr17:20981752|20981885 hsa-miR-197-5p 1 0 0
chr17:20981752|20981885 hsa-miR-8069 1 0 0
chr17:20981752|20981885 hsa-miR-7108-5p 1 1 0
chr17:20981752|20981885 hsa-miR-503-5p 1 1 0
chr17:20981752|20981885 hsa-miR-3190-3p 1 0 0
chr17:20981752|20981885 hsa-miR-6805-5p 1 0 0
chr17:20981752|20981885 hsa-miR-5006-5p 1 1 0
chr17:20981752|20981885 hsa-miR-6786-5p 1 0 0
chr17:20981752|20981885 hsa-miR-1226-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6753-5p 1 0 0
chr17:20981752|20981885 hsa-miR-1908-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4690-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4732-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4743-5p 1 0 0
chr17:20981752|20981885 hsa-miR-3648 1 0 0
chr17:20981752|20981885 hsa-miR-149-3p 1 0 0
chr17:20981752|20981885 hsa-miR-6717-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6781-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6801-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4766-5p 0 1 0
chr17:20981752|20981885 hsa-miR-10400-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4763-3p 1 0 0
chr17:20981752|20981885 hsa-miR-6787-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6893-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6775-5p 1 1 0
chr17:20981752|20981885 hsa-miR-1343-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6743-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6752-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6754-5p 1 0 0
chr17:20981752|20981885 hsa-miR-7110-5p 1 0 0
chr17:20981752|20981885 hsa-miR-10401-5p 1 0 0
chr17:20981752|20981885 hsa-miR-11181-3p 1 0 0
chr17:20981752|20981885 hsa-miR-1249-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6722-3p 1 0 0
chr17:20981752|20981885 hsa-miR-6797-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6808-5p 1 1 0
chr17:20981752|20981885 hsa-miR-6879-5p 1 1 0
chr17:20981752|20981885 hsa-miR-1915-3p 1 0 0
chr17:20981752|20981885 hsa-miR-6780b-5p 1 0 0
chr17:20981752|20981885 hsa-miR-10526-3p 1 0 0
chr17:20981752|20981885 hsa-miR-1237-5p 1 0 0
chr17:20981752|20981885 hsa-miR-449c-5p 1 1 0
chr17:20981752|20981885 hsa-miR-4632-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4685-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4726-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4749-5p 1 1 0
chr17:20981752|20981885 hsa-miR-6735-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6795-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6846-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6848-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6858-5p 1 0 0
chr17:20981752|20981885 hsa-miR-4436b-3p 1 1 0
chr17:20981752|20981885 hsa-miR-6831-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6845-5p 1 0 0
chr17:20981752|20981885 hsa-miR-34b-5p 0 1 0
chr17:20981752|20981885 hsa-miR-6511a-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6856-5p 1 0 0
chr17:20981752|20981885 hsa-miR-3173-3p 0 1 0
chr17:20981752|20981885 hsa-miR-4747-5p 1 0 0
chr17:20981752|20981885 hsa-miR-6891-5p 1 1 0
chr17:20981752|20981885 hsa-miR-4716-3p 1 0 0
chr17:20981752|20981885 hsa-miR-6837-5p 1 0 0
chr17:20981752|20981885 hsa-miR-2682-5p 0 1 0
chr17:20981752|20981885 hsa-miR-891a-5p 1 0 0
chr17:20981752|20981885 hsa-miR-196a-1-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:20981752|20981885
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MATLPPFSVEHAMFFPASGSLHMLFPLPGMHALYHL
Nucleotide Sequence CTGGCCACACTGCCTCCTTTCAGTGTCGAACATGCCATGTTCTTCCCTGCCTCGGGTTCTTTGCACATGTTGTTCCCGCTGCCTGGAATGCATGCTCTCTATCATCTT
CircID chr17:20981752|20981885
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MLWPHCLLSVSNMPCSSLPRVLCTCCSRCLECMLSIIF
Nucleotide Sequence CTGCTCTGGCCACACTGCCTCCTTTCAGTGTCGAACATGCCATGTTCTTCCCTGCCTCGGGTTCTTTGCACATGTTGTTCCCGCTGCCTGGAATGCATGCTCTCTATCATCTTC
CircID chr17:20981752|20981885
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MCKEPEAGKNMACSTLKGGSVARAGRWRDK
Nucleotide Sequence ATGTGCAAAGAACCCGAGGCAGGGAAGAACATGGCATGTTCGACACTGAAAGGAGGCAGTGTGGCCAGAGCAGGAAGGTGGAGGGATAAG
CircID chr17:20981752|20981885
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MIESMHSRQREQHVQRTRGREEHGMFDTERRQCGQSRKVEG
Nucleotide Sequence ATGATAGAGAGCATGCATTCCAGGCAGCGGGAACAACATGTGCAAAGAACCCGAGGCAGGGAAGAACATGGCATGTTCGACACTGAAAGGAGGCAGTGTGGCCAGAGCAGGAAGGTGGAGGGATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab