CircRNA Information

General Information
circRNA Basic Information
CircID chr17:2385551|2385829
Strand +
CircType exon
Host Gene ENSG00000070444.13;
Algorism CIRI2;
Sequence ATCAGGAAGGTAAAAACCCAGCGGCTTAGCCAAGCCCTAAGCCTGTCCCCAGACCAACCCTGGGACCTATACAGAACAGAGGGCCAGAGCTAGGGCTGCTGCTTCTGCTCCAGCCCCTTTGCCTCTGTCCTCCCATCCCCTCAACACCCTGCTTCTCCCGGGGACGCTTTTGAGTGGGCCCTGCCCGGGGAGCTGCAGAGCAGCAGCACCTTTCTCTGAGAAGAGGTCCTTGGTTGGGTCAAGGACAGGGCTGAGCGTGGAAGGGGGAGGAGTCAGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:2385551|2385829 hsa-miR-15a-5p 0 0 1
chr17:2385551|2385829 hsa-miR-15a-3p 0 0 1
chr17:2385551|2385829 hsa-miR-18a-5p 0 0 1
chr17:2385551|2385829 hsa-miR-18a-3p 0 0 1
chr17:2385551|2385829 hsa-miR-15b-5p 0 0 1
chr17:2385551|2385829 hsa-miR-15b-3p 0 0 1
chr17:2385551|2385829 hsa-miR-195-5p 0 0 1
chr17:2385551|2385829 hsa-miR-195-3p 0 0 1
chr17:2385551|2385829 hsa-miR-328-5p 0 0 1
chr17:2385551|2385829 hsa-miR-328-3p 0 0 1
chr17:2385551|2385829 hsa-miR-345-5p 0 0 1
chr17:2385551|2385829 hsa-miR-345-3p 0 0 1
chr17:2385551|2385829 hsa-miR-424-5p 0 0 1
chr17:2385551|2385829 hsa-miR-424-3p 0 0 1
chr17:2385551|2385829 hsa-miR-18b-5p 0 0 1
chr17:2385551|2385829 hsa-miR-18b-3p 0 0 1
chr17:2385551|2385829 hsa-miR-497-5p 0 0 1
chr17:2385551|2385829 hsa-miR-497-3p 0 0 1
chr17:2385551|2385829 hsa-miR-609 0 0 1
chr17:2385551|2385829 hsa-miR-629-5p 0 0 1
chr17:2385551|2385829 hsa-miR-629-3p 0 0 1
chr17:2385551|2385829 hsa-miR-637 1 0 1
chr17:2385551|2385829 hsa-miR-1296-5p 0 0 1
chr17:2385551|2385829 hsa-miR-1296-3p 0 0 1
chr17:2385551|2385829 hsa-miR-1301-5p 0 0 1
chr17:2385551|2385829 hsa-miR-1301-3p 0 0 1
chr17:2385551|2385829 hsa-miR-298 0 1 1
chr17:2385551|2385829 hsa-miR-888-5p 0 0 1
chr17:2385551|2385829 hsa-miR-888-3p 0 0 1
chr17:2385551|2385829 hsa-miR-942-5p 0 0 1
chr17:2385551|2385829 hsa-miR-942-3p 0 0 1
chr17:2385551|2385829 hsa-miR-1200 0 0 1
chr17:2385551|2385829 hsa-miR-1205 0 0 1
chr17:2385551|2385829 hsa-miR-1291 0 0 1
chr17:2385551|2385829 hsa-miR-296-3p 0 1 1
chr17:2385551|2385829 hsa-miR-146b-3p 0 0 1
chr17:2385551|2385829 hsa-miR-339-5p 1 1 1
chr17:2385551|2385829 hsa-miR-1184 0 0 1
chr17:2385551|2385829 hsa-miR-423-5p 0 0 1
chr17:2385551|2385829 hsa-miR-1207-5p 1 0 1
chr17:2385551|2385829 hsa-miR-574-3p 0 0 1
chr17:2385551|2385829 hsa-miR-16 0 0 1
chr17:2385551|2385829 hsa-miR-484 1 0 0
chr17:2385551|2385829 hsa-miR-608 1 0 0
chr17:2385551|2385829 hsa-miR-612 1 1 0
chr17:2385551|2385829 hsa-miR-762 1 1 0
chr17:2385551|2385829 hsa-miR-940 1 0 0
chr17:2385551|2385829 hsa-miR-1182 1 0 0
chr17:2385551|2385829 hsa-miR-1303 0 1 0
chr17:2385551|2385829 hsa-miR-1913 1 0 0
chr17:2385551|2385829 hsa-miR-4270 1 0 0
chr17:2385551|2385829 hsa-miR-4281 1 0 0
chr17:2385551|2385829 hsa-miR-4430 0 1 0
chr17:2385551|2385829 hsa-miR-4449 1 0 0
chr17:2385551|2385829 hsa-miR-3135b 0 1 0
chr17:2385551|2385829 hsa-miR-4468 0 1 0
chr17:2385551|2385829 hsa-miR-4469 1 0 0
chr17:2385551|2385829 hsa-miR-4498 0 1 0
chr17:2385551|2385829 hsa-miR-4507 1 0 0
chr17:2385551|2385829 hsa-miR-4516 1 0 0
chr17:2385551|2385829 hsa-miR-4651 1 0 0
chr17:2385551|2385829 hsa-miR-4669 1 0 0
chr17:2385551|2385829 hsa-miR-4686 1 0 0
chr17:2385551|2385829 hsa-miR-4706 1 0 0
chr17:2385551|2385829 hsa-miR-4739 1 1 0
chr17:2385551|2385829 hsa-miR-5193 1 0 0
chr17:2385551|2385829 hsa-miR-5691 0 1 0
chr17:2385551|2385829 hsa-miR-5703 1 1 0
chr17:2385551|2385829 hsa-miR-6081 0 1 0
chr17:2385551|2385829 hsa-miR-6085 0 1 0
chr17:2385551|2385829 hsa-miR-6127 1 0 0
chr17:2385551|2385829 hsa-miR-6132 1 0 0
chr17:2385551|2385829 hsa-miR-6165 1 0 0
chr17:2385551|2385829 hsa-miR-6860 1 0 0
chr17:2385551|2385829 hsa-miR-8085 1 0 0
chr17:2385551|2385829 hsa-miR-8089 1 1 0
chr17:2385551|2385829 hsa-miR-6749-3p 1 1 0
chr17:2385551|2385829 hsa-miR-6734-5p 1 1 0
chr17:2385551|2385829 hsa-miR-3194-3p 0 1 0
chr17:2385551|2385829 hsa-miR-6747-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6836-3p 1 0 0
chr17:2385551|2385829 hsa-miR-149-5p 1 0 0
chr17:2385551|2385829 hsa-miR-7106-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6894-5p 1 0 0
chr17:2385551|2385829 hsa-miR-4687-3p 1 0 0
chr17:2385551|2385829 hsa-miR-6799-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6510-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6728-5p 1 1 0
chr17:2385551|2385829 hsa-miR-7851-3p 1 0 0
chr17:2385551|2385829 hsa-miR-6089 1 0 0
chr17:2385551|2385829 hsa-miR-3192-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6757-5p 1 1 0
chr17:2385551|2385829 hsa-miR-4695-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6746-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6730-5p 0 1 0
chr17:2385551|2385829 hsa-miR-7154-3p 0 1 0
chr17:2385551|2385829 hsa-miR-6840-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6727-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6721-5p 0 1 0
chr17:2385551|2385829 hsa-miR-218-5p 0 1 0
chr17:2385551|2385829 hsa-miR-7845-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6871-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6772-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6732-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6760-5p 1 0 0
chr17:2385551|2385829 hsa-miR-2467-3p 1 1 0
chr17:2385551|2385829 hsa-miR-6782-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6810-5p 1 1 0
chr17:2385551|2385829 hsa-miR-4713-5p 1 0 0
chr17:2385551|2385829 hsa-miR-4436b-5p 1 0 0
chr17:2385551|2385829 hsa-miR-615-5p 1 0 0
chr17:2385551|2385829 hsa-miR-5088-5p 1 0 0
chr17:2385551|2385829 hsa-miR-1226-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6763-3p 0 1 0
chr17:2385551|2385829 hsa-miR-5187-3p 1 0 0
chr17:2385551|2385829 hsa-miR-193b-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6771-5p 1 0 0
chr17:2385551|2385829 hsa-miR-4690-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6823-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6861-3p 0 1 0
chr17:2385551|2385829 hsa-miR-6818-3p 1 0 0
chr17:2385551|2385829 hsa-miR-4787-5p 1 0 0
chr17:2385551|2385829 hsa-miR-149-3p 1 0 0
chr17:2385551|2385829 hsa-miR-378a-5p 1 0 0
chr17:2385551|2385829 hsa-miR-3162-5p 1 0 0
chr17:2385551|2385829 hsa-miR-5010-5p 1 1 0
chr17:2385551|2385829 hsa-miR-7112-5p 1 1 0
chr17:2385551|2385829 hsa-miR-4707-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6730-3p 1 0 0
chr17:2385551|2385829 hsa-miR-4732-3p 1 1 0
chr17:2385551|2385829 hsa-miR-5088-3p 1 1 0
chr17:2385551|2385829 hsa-miR-5004-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6748-3p 0 1 0
chr17:2385551|2385829 hsa-miR-7152-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6779-3p 0 1 0
chr17:2385551|2385829 hsa-miR-5587-3p 0 1 0
chr17:2385551|2385829 hsa-miR-6839-3p 0 1 0
chr17:2385551|2385829 hsa-miR-4764-3p 1 0 0
chr17:2385551|2385829 hsa-miR-1233-5p 1 1 0
chr17:2385551|2385829 hsa-miR-1273h-5p 0 1 0
chr17:2385551|2385829 hsa-miR-4763-3p 1 1 0
chr17:2385551|2385829 hsa-miR-6778-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6812-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6816-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6893-5p 1 1 0
chr17:2385551|2385829 hsa-miR-5001-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6743-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6752-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6756-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6803-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6813-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6819-5p 1 0 0
chr17:2385551|2385829 hsa-miR-7110-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6722-3p 1 0 0
chr17:2385551|2385829 hsa-miR-6779-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6780a-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6788-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6797-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6808-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6879-5p 1 0 0
chr17:2385551|2385829 hsa-miR-7111-5p 1 0 0
chr17:2385551|2385829 hsa-miR-3127-3p 1 1 0
chr17:2385551|2385829 hsa-miR-4685-3p 1 0 0
chr17:2385551|2385829 hsa-miR-3620-5p 1 0 0
chr17:2385551|2385829 hsa-miR-4728-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6836-5p 1 1 0
chr17:2385551|2385829 hsa-miR-10526-3p 0 1 0
chr17:2385551|2385829 hsa-miR-4649-5p 1 0 0
chr17:2385551|2385829 hsa-miR-4685-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6729-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6735-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6738-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6795-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6846-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6848-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6887-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6889-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6731-5p 1 1 0
chr17:2385551|2385829 hsa-miR-6856-5p 0 1 0
chr17:2385551|2385829 hsa-miR-7843-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6891-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6791-5p 1 0 0
chr17:2385551|2385829 hsa-miR-6756-3p 1 1 0
chr17:2385551|2385829 hsa-miR-6805-3p 0 1 0
chr17:2385551|2385829 hsa-miR-6829-3p 1 0 0
chr17:2385551|2385829 hsa-miR-6775-3p 1 1 0
chr17:2385551|2385829 hsa-miR-125a-5p 1 0 0
chr17:2385551|2385829 hsa-miR-483-3p 1 0 0
chr17:2385551|2385829 hsa-miR-3085-3p 1 0 0
chr17:2385551|2385829 hsa-miR-10397-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6764-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6838-5p 0 1 0
chr17:2385551|2385829 hsa-miR-6820-3p 1 0 0
chr17:2385551|2385829 hsa-miR-6505-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:2385551|2385829
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MPLSSHPLNTLLLPGTLLSGPCPGSCRAAAPFSEKRSLVGSRTGLSVEGGGVR
Nucleotide Sequence TTGCCTCTGTCCTCCCATCCCCTCAACACCCTGCTTCTCCCGGGGACGCTTTTGAGTGGGCCCTGCCCGGGGAGCTGCAGAGCAGCAGCACCTTTCTCTGAGAAGAGGTCCTTGGTTGGGTCAAGGACAGGGCTGAGCGTGGAAGGGGGAGGAGTCAGG
CircID chr17:2385551|2385829
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MGPIQNRGPELGLLLLLQPLCLCPPIPSTPCFSRGRF
Nucleotide Sequence CTGGGACCTATACAGAACAGAGGGCCAGAGCTAGGGCTGCTGCTTCTGCTCCAGCCCCTTTGCCTCTGTCCTCCCATCCCCTCAACACCCTGCTTCTCCCGGGGACGCTTTTGA
CircID chr17:2385551|2385829
ORF Type ORF3
Protein Length 69
Nucleotide Length 210
Protein Sequence MTPPPSTLSPVLDPTKDLFSEKGAAALQLPGQGPLKSVPGRSRVLRGWEDRGKGAGAEAAALALALCSV
Nucleotide Sequence CTGACTCCTCCCCCTTCCACGCTCAGCCCTGTCCTTGACCCAACCAAGGACCTCTTCTCAGAGAAAGGTGCTGCTGCTCTGCAGCTCCCCGGGCAGGGCCCACTCAAAAGCGTCCCCGGGAGAAGCAGGGTGTTGAGGGGATGGGAGGACAGAGGCAAAGGGGCTGGAGCAGAAGCAGCAGCCCTAGCTCTGGCCCTCTGTTCTGTATAG
CircID chr17:2385551|2385829
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MSLTQPRTSSQRKVLLLCSSPGRAHSKASPGEAGC
Nucleotide Sequence CTGTCCTTGACCCAACCAAGGACCTCTTCTCAGAGAAAGGTGCTGCTGCTCTGCAGCTCCCCGGGCAGGGCCCACTCAAAAGCGTCCCCGGGAGAAGCAGGGTGTTGA
CircID chr17:2385551|2385829
ORF Type ORF5
Protein Length 36
Nucleotide Length 111
Protein Sequence MGGQRQRGWSRSSSPSSGPLFCIGPRVGLGTGLGLG
Nucleotide Sequence ATGGGAGGACAGAGGCAAAGGGGCTGGAGCAGAAGCAGCAGCCCTAGCTCTGGCCCTCTGTTCTGTATAGGTCCCAGGGTTGGTCTGGGGACAGGCTTAGGGCTTGGCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab