CircRNA Information

General Information
circRNA Basic Information
CircID chr17:2698037|2698327
Strand +
CircType exon
Host Gene ENSG00000132361.15;
Algorism CIRI2;
Sequence GGTGGTGGTGGATTACCGCGGCTACCGGGTCACGGCCCAGTCCATCATCCCCGGCATCCTGGAGCGGGACCAGGAGCAGAGCGTCATCTACGGCTCCATCGACTTCGGCAAGACCGTGGTGTCACACCCGCGGTACCTGGAGCTGCTGGAGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGAGGTGGAGCTCTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAACGACGGGCGCCACTACATCCTCGACCTGCTGCGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:2698037|2698327 hsa-miR-214-5p 0 0 1
chr17:2698037|2698327 hsa-miR-214-3p 0 0 1
chr17:2698037|2698327 hsa-miR-431-5p 0 0 1
chr17:2698037|2698327 hsa-miR-431-3p 0 0 1
chr17:2698037|2698327 hsa-miR-526b-5p 0 0 1
chr17:2698037|2698327 hsa-miR-526b-3p 0 0 1
chr17:2698037|2698327 hsa-miR-611 0 0 1
chr17:2698037|2698327 hsa-miR-646 0 0 1
chr17:2698037|2698327 hsa-miR-766-5p 0 0 1
chr17:2698037|2698327 hsa-miR-766-3p 0 0 1
chr17:2698037|2698327 hsa-miR-665 1 0 1
chr17:2698037|2698327 hsa-miR-933 0 0 1
chr17:2698037|2698327 hsa-miR-938 0 0 1
chr17:2698037|2698327 hsa-miR-1265 0 1 1
chr17:2698037|2698327 hsa-miR-1288-5p 0 0 1
chr17:2698037|2698327 hsa-miR-1288-3p 0 0 1
chr17:2698037|2698327 hsa-miR-1322 0 0 1
chr17:2698037|2698327 hsa-miR-542-5p 0 0 1
chr17:2698037|2698327 hsa-miR-423-5p 0 1 1
chr17:2698037|2698327 hsa-miR-566 0 0 1
chr17:2698037|2698327 hsa-miR-767-3p 0 0 1
chr17:2698037|2698327 hsa-miR-338-3p 0 0 1
chr17:2698037|2698327 hsa-miR-542-3p 0 0 1
chr17:2698037|2698327 hsa-miR-142-3p 0 0 1
chr17:2698037|2698327 hsa-miR-151-5p 0 0 1
chr17:2698037|2698327 hsa-miR-220b 0 0 1
chr17:2698037|2698327 hsa-miR-1269 0 0 1
chr17:2698037|2698327 hsa-miR-886-3p 0 0 1
chr17:2698037|2698327 hsa-miR-572 1 0 0
chr17:2698037|2698327 hsa-miR-762 1 0 0
chr17:2698037|2698327 hsa-miR-1182 1 0 0
chr17:2698037|2698327 hsa-miR-1269a 0 1 0
chr17:2698037|2698327 hsa-miR-1193 0 1 0
chr17:2698037|2698327 hsa-miR-4281 1 0 0
chr17:2698037|2698327 hsa-miR-3907 1 0 0
chr17:2698037|2698327 hsa-miR-4497 1 0 0
chr17:2698037|2698327 hsa-miR-4515 1 1 0
chr17:2698037|2698327 hsa-miR-1269b 0 1 0
chr17:2698037|2698327 hsa-miR-6081 0 1 0
chr17:2698037|2698327 hsa-miR-8082 0 1 0
chr17:2698037|2698327 hsa-miR-8089 1 1 0
chr17:2698037|2698327 hsa-miR-9901 1 0 0
chr17:2698037|2698327 hsa-miR-12119 1 0 0
chr17:2698037|2698327 hsa-miR-128-1-5p 0 1 0
chr17:2698037|2698327 hsa-miR-3194-3p 0 1 0
chr17:2698037|2698327 hsa-miR-4665-3p 0 1 0
chr17:2698037|2698327 hsa-miR-6894-5p 1 0 0
chr17:2698037|2698327 hsa-miR-5187-5p 0 1 0
chr17:2698037|2698327 hsa-miR-6089 1 0 0
chr17:2698037|2698327 hsa-miR-1225-3p 1 0 0
chr17:2698037|2698327 hsa-miR-4722-5p 1 0 0
chr17:2698037|2698327 hsa-miR-4655-5p 1 1 0
chr17:2698037|2698327 hsa-miR-6728-3p 0 1 0
chr17:2698037|2698327 hsa-miR-6772-3p 0 1 0
chr17:2698037|2698327 hsa-miR-3691-5p 1 0 0
chr17:2698037|2698327 hsa-miR-885-3p 1 0 0
chr17:2698037|2698327 hsa-miR-6501-5p 0 1 0
chr17:2698037|2698327 hsa-miR-3648 1 1 0
chr17:2698037|2698327 hsa-miR-6886-5p 1 1 0
chr17:2698037|2698327 hsa-miR-7152-3p 0 1 0
chr17:2698037|2698327 hsa-miR-6828-3p 0 1 0
chr17:2698037|2698327 hsa-miR-6789-3p 0 1 0
chr17:2698037|2698327 hsa-miR-500a-3p 1 0 0
chr17:2698037|2698327 hsa-miR-6870-5p 1 0 0
chr17:2698037|2698327 hsa-miR-6752-5p 1 0 0
chr17:2698037|2698327 hsa-miR-6803-5p 0 1 0
chr17:2698037|2698327 hsa-miR-320a-5p 0 1 0
chr17:2698037|2698327 hsa-miR-3620-5p 1 1 0
chr17:2698037|2698327 hsa-miR-328-5p 1 0 0
chr17:2698037|2698327 hsa-miR-6885-5p 1 0 0
chr17:2698037|2698327 hsa-miR-3085-5p 1 0 0
chr17:2698037|2698327 hsa-miR-4700-5p 0 1 0
chr17:2698037|2698327 hsa-miR-3184-5p 1 1 0
chr17:2698037|2698327 hsa-miR-6724-5p 1 0 0
chr17:2698037|2698327 hsa-miR-6805-3p 1 1 0
chr17:2698037|2698327 hsa-miR-3619-5p 0 1 0
chr17:2698037|2698327 hsa-miR-1301-5p 0 1 0
chr17:2698037|2698327 hsa-miR-151a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr17:2698037|2698327
ORF Type ORF1
Protein Length 77
Nucleotide Length 231
Protein Sequence MERDQEQSVIYGSIDFGKTVVSHPRYLELLERTSRPLKILRHQVLNDRDEEVELCSSVECKGIIGNDGRHYILDLLR
Nucleotide Sequence CTGGAGCGGGACCAGGAGCAGAGCGTCATCTACGGCTCCATCGACTTCGGCAAGACCGTGGTGTCACACCCGCGGTACCTGGAGCTGCTGGAGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGAGGTGGAGCTCTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAACGACGGGCGCCACTACATCCTCGACCTGCTGCGC

CircID chr17:2698037|2698327
ORF Type ORF2
Protein Length 55
Nucleotide Length 168
Protein Sequence MPMMPLHSTEEQSSTSSSRSLSTWCRRILRGRLVRSSSSRYRGCDTTVLPKSMEP
Nucleotide Sequence TTGCCAATGATGCCCTTGCACTCGACCGAGGAGCAGAGCTCCACCTCCTCGTCACGGTCGTTGAGCACCTGGTGCCGCAGGATCTTGAGGGGCCGACTCGTGCGCTCCAGCAGCTCCAGGTACCGCGGGTGTGACACCACGGTCTTGCCGAAGTCGATGGAGCCGTAG

CircID chr17:2698037|2698327
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MLLVPLQDAGDDGLGRDPVAAVIHHH
Nucleotide Sequence CTGCTCCTGGTCCCGCTCCAGGATGCCGGGGATGATGGACTGGGCCGTGACCCGGTAGCCGCGGTAATCCACCACCAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites