CircRNA Information

General Information
circRNA Basic Information
CircID chr17:28610536|28610790
Strand +
CircType exon
Host Gene ENSG00000167524.13;
Algorism CIRI2;
Sequence AGCTCCATGAACTTCTTTCTTCTTTTCCATCCTTTCTGTTCAGGCCTGTCCTGTCCTAGTCACTCATCCTTCATGCTCTATTTTCCTTCAGCTCTTATGCCAGAACCCCCTCCATCGTCTACGTTATCTGCATCACTTCCAGGTCCACCCTTTCTTTCGGGGTGTGGCCTTCGACCCAGAGCTCCTACAGAAGCAGCCAGTGAACTTTGTCACGGAGACACAAGCTACCCAGCCCAGTTCAGCGGAGACCATGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:28610536|28610790 hsa-miR-326 0 0 1
chr17:28610536|28610790 hsa-miR-492 0 0 1
chr17:28610536|28610790 hsa-miR-581 0 0 1
chr17:28610536|28610790 hsa-miR-592 0 0 1
chr17:28610536|28610790 hsa-miR-599 0 0 1
chr17:28610536|28610790 hsa-miR-604 0 0 1
chr17:28610536|28610790 hsa-miR-619-5p 0 0 1
chr17:28610536|28610790 hsa-miR-619-3p 0 0 1
chr17:28610536|28610790 hsa-miR-631 0 0 1
chr17:28610536|28610790 hsa-miR-647 0 0 1
chr17:28610536|28610790 hsa-miR-892b 0 0 1
chr17:28610536|28610790 hsa-miR-708-5p 0 0 1
chr17:28610536|28610790 hsa-miR-708-3p 0 0 1
chr17:28610536|28610790 hsa-miR-1206 0 0 1
chr17:28610536|28610790 hsa-miR-1255a 0 0 1
chr17:28610536|28610790 hsa-miR-1277-5p 0 0 1
chr17:28610536|28610790 hsa-miR-1277-3p 0 0 1
chr17:28610536|28610790 hsa-miR-1252-5p 0 0 1
chr17:28610536|28610790 hsa-miR-1252-3p 0 0 1
chr17:28610536|28610790 hsa-miR-1197 0 0 1
chr17:28610536|28610790 hsa-miR-28-5p 0 0 1
chr17:28610536|28610790 hsa-miR-490-5p 0 0 1
chr17:28610536|28610790 hsa-miR-330-5p 0 0 1
chr17:28610536|28610790 hsa-miR-886-5p 0 0 1
chr17:28610536|28610790 hsa-miR-1255b 0 0 1
chr17:28610536|28610790 hsa-miR-612 1 0 0
chr17:28610536|28610790 hsa-miR-632 1 0 0
chr17:28610536|28610790 hsa-miR-658 1 0 0
chr17:28610536|28610790 hsa-miR-762 1 0 0
chr17:28610536|28610790 hsa-miR-1183 1 0 0
chr17:28610536|28610790 hsa-miR-2278 1 0 0
chr17:28610536|28610790 hsa-miR-2861 1 0 0
chr17:28610536|28610790 hsa-miR-3154 1 0 0
chr17:28610536|28610790 hsa-miR-4298 1 0 0
chr17:28610536|28610790 hsa-miR-1268b 1 0 0
chr17:28610536|28610790 hsa-miR-4428 1 0 0
chr17:28610536|28610790 hsa-miR-4436a 1 0 0
chr17:28610536|28610790 hsa-miR-4450 1 0 0
chr17:28610536|28610790 hsa-miR-4463 1 0 0
chr17:28610536|28610790 hsa-miR-4468 1 0 0
chr17:28610536|28610790 hsa-miR-4476 1 0 0
chr17:28610536|28610790 hsa-miR-4481 1 0 0
chr17:28610536|28610790 hsa-miR-4487 1 0 0
chr17:28610536|28610790 hsa-miR-4488 1 0 0
chr17:28610536|28610790 hsa-miR-4498 1 0 0
chr17:28610536|28610790 hsa-miR-2392 1 0 0
chr17:28610536|28610790 hsa-miR-4534 1 0 0
chr17:28610536|28610790 hsa-miR-1587 1 0 0
chr17:28610536|28610790 hsa-miR-4539 1 0 0
chr17:28610536|28610790 hsa-miR-4651 1 0 0
chr17:28610536|28610790 hsa-miR-4656 1 0 0
chr17:28610536|28610790 hsa-miR-4739 1 0 0
chr17:28610536|28610790 hsa-miR-5093 1 0 0
chr17:28610536|28610790 hsa-miR-5191 1 0 0
chr17:28610536|28610790 hsa-miR-5194 1 0 0
chr17:28610536|28610790 hsa-miR-5681a 1 0 0
chr17:28610536|28610790 hsa-miR-6076 1 0 0
chr17:28610536|28610790 hsa-miR-6086 1 0 0
chr17:28610536|28610790 hsa-miR-6090 1 0 0
chr17:28610536|28610790 hsa-miR-6124 1 0 0
chr17:28610536|28610790 hsa-miR-6132 1 0 0
chr17:28610536|28610790 hsa-miR-6133 1 0 0
chr17:28610536|28610790 hsa-miR-6745 1 0 0
chr17:28610536|28610790 hsa-miR-6860 1 0 0
chr17:28610536|28610790 hsa-miR-7515 1 0 0
chr17:28610536|28610790 hsa-miR-8060 1 0 0
chr17:28610536|28610790 hsa-miR-9718 1 0 0
chr17:28610536|28610790 hsa-miR-1843 1 0 0
chr17:28610536|28610790 hsa-miR-12118 1 0 0
chr17:28610536|28610790 hsa-miR-12119 1 0 0
chr17:28610536|28610790 hsa-miR-134-5p 1 0 0
chr17:28610536|28610790 hsa-miR-152-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6809-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6765-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6861-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6894-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4687-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6728-5p 1 0 0
chr17:28610536|28610790 hsa-miR-8071 1 0 0
chr17:28610536|28610790 hsa-miR-766-5p 1 0 0
chr17:28610536|28610790 hsa-miR-1236-5p 1 0 0
chr17:28610536|28610790 hsa-miR-5187-5p 1 0 0
chr17:28610536|28610790 hsa-miR-7114-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6757-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6873-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6880-5p 1 0 0
chr17:28610536|28610790 hsa-miR-7847-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6744-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4722-5p 1 0 0
chr17:28610536|28610790 hsa-miR-3064-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6730-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6741-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6762-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6721-5p 1 0 0
chr17:28610536|28610790 hsa-miR-23b-5p 1 0 0
chr17:28610536|28610790 hsa-miR-8069 1 0 0
chr17:28610536|28610790 hsa-miR-6776-5p 1 0 0
chr17:28610536|28610790 hsa-miR-7845-5p 1 0 0
chr17:28610536|28610790 hsa-miR-3605-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6793-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6829-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6732-5p 1 0 0
chr17:28610536|28610790 hsa-miR-656-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6805-5p 1 0 0
chr17:28610536|28610790 hsa-miR-23a-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6760-5p 1 0 0
chr17:28610536|28610790 hsa-miR-345-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6835-5p 1 0 0
chr17:28610536|28610790 hsa-miR-5088-5p 1 0 0
chr17:28610536|28610790 hsa-miR-1226-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4738-3p 1 0 0
chr17:28610536|28610790 hsa-miR-3944-3p 1 0 0
chr17:28610536|28610790 hsa-miR-193b-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4640-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6753-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6757-3p 1 0 0
chr17:28610536|28610790 hsa-miR-296-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6823-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4732-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6749-5p 1 0 0
chr17:28610536|28610790 hsa-miR-3202 1 0 0
chr17:28610536|28610790 hsa-miR-7854-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6834-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4446-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6717-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6824-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6877-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6864-5p 1 0 0
chr17:28610536|28610790 hsa-miR-7112-5p 1 0 0
chr17:28610536|28610790 hsa-miR-5000-3p 1 0 0
chr17:28610536|28610790 hsa-miR-483-5p 1 0 0
chr17:28610536|28610790 hsa-miR-3121-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6503-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6787-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6893-5p 1 0 0
chr17:28610536|28610790 hsa-miR-5001-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6752-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6756-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6803-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6819-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6851-5p 1 0 0
chr17:28610536|28610790 hsa-miR-7110-5p 1 0 0
chr17:28610536|28610790 hsa-miR-11181-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6774-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6779-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6780a-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6797-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6879-5p 1 0 0
chr17:28610536|28610790 hsa-miR-3620-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4728-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6862-5p 1 0 0
chr17:28610536|28610790 hsa-miR-1237-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4632-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6735-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6738-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6794-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6883-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4436b-3p 1 0 0
chr17:28610536|28610790 hsa-miR-4758-5p 1 0 0
chr17:28610536|28610790 hsa-miR-3940-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6739-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6758-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6856-5p 1 0 0
chr17:28610536|28610790 hsa-miR-1914-3p 1 0 0
chr17:28610536|28610790 hsa-miR-3173-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6876-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6891-5p 1 0 0
chr17:28610536|28610790 hsa-miR-4716-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6790-5p 1 0 0
chr17:28610536|28610790 hsa-miR-3085-3p 1 0 0
chr17:28610536|28610790 hsa-miR-6504-5p 1 0 0
chr17:28610536|28610790 hsa-miR-6811-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:28610536|28610790
ORF Type ORF1
Protein Length 83
Nucleotide Length 249
Protein Sequence MNFFLLFHPFCSGLSCPSHSSFMLYFPSALMPEPPPSSTLSASLPGPPFLSGCGLRPRAPTEAASELCHGDTSYPAQFSGDHA
Nucleotide Sequence ATGAACTTCTTTCTTCTTTTCCATCCTTTCTGTTCAGGCCTGTCCTGTCCTAGTCACTCATCCTTCATGCTCTATTTTCCTTCAGCTCTTATGCCAGAACCCCCTCCATCGTCTACGTTATCTGCATCACTTCCAGGTCCACCCTTTCTTTCGGGGTGTGGCCTTCGACCCAGAGCTCCTACAGAAGCAGCCAGTGAACTTTGTCACGGAGACACAAGCTACCCAGCCCAGTTCAGCGGAGACCATGCC
CircID chr17:28610536|28610790
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MHHFQVHPFFRGVAFDPELLQKQPVNFVTETQATQPSSAETM
Nucleotide Sequence CTGCATCACTTCCAGGTCCACCCTTTCTTTCGGGGTGTGGCCTTCGACCCAGAGCTCCTACAGAAGCAGCCAGTGAACTTTGTCACGGAGACACAAGCTACCCAGCCCAGTTCAGCGGAGACCATG
CircID chr17:28610536|28610790
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MVSAELGWVACVSVTKFTGCFCRSSGSKATPRKKGWTWK
Nucleotide Sequence ATGGTCTCCGCTGAACTGGGCTGGGTAGCTTGTGTCTCCGTGACAAAGTTCACTGGCTGCTTCTGTAGGAGCTCTGGGTCGAAGGCCACACCCCGAAAGAAAGGGTGGACCTGGAAGTGA
CircID chr17:28610536|28610790
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MAASVGALGRRPHPERKGGPGSDADNVDDGGGSGIRAEGK
Nucleotide Sequence CTGGCTGCTTCTGTAGGAGCTCTGGGTCGAAGGCCACACCCCGAAAGAAAGGGTGGACCTGGAAGTGATGCAGATAACGTAGACGATGGAGGGGGTTCTGGCATAAGAGCTGAAGGAAAATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab