CircNet

General Information

circRNA Basic Information

CircID	chr17:28616954\|28617093
Strand	+
CircType	exon
Host Gene	ENSG00000227543.4;
Algorism	CIRI2;
Sequence	CATTGCTTCTCCTCTCATTCTGCAGAGGATTTGTGGGTTGCTTTATGGCAGGAAGGACATTGGGTTGGGCTCTTCTTTACTCTCTATCCTACAGGTAGTACTGCGGCCCCAGAGCTCCTGCCAGTCTGGGCGACAGCTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:28616954\|28617093	hsa-miR-186-5p	0	0	1
chr17:28616954\|28617093	hsa-miR-186-3p	0	0	1
chr17:28616954\|28617093	hsa-miR-326	0	0	1
chr17:28616954\|28617093	hsa-miR-637	0	0	1
chr17:28616954\|28617093	hsa-miR-298	0	0	1
chr17:28616954\|28617093	hsa-miR-708-5p	0	0	1
chr17:28616954\|28617093	hsa-miR-708-3p	0	0	1
chr17:28616954\|28617093	hsa-miR-1205	0	0	1
chr17:28616954\|28617093	hsa-miR-1184	0	0	1
chr17:28616954\|28617093	hsa-miR-28-5p	0	0	1
chr17:28616954\|28617093	hsa-miR-1207-5p	0	0	1
chr17:28616954\|28617093	hsa-miR-330-5p	0	1	1
chr17:28616954\|28617093	hsa-miR-1183	1	0	0
chr17:28616954\|28617093	hsa-miR-1248	0	1	0
chr17:28616954\|28617093	hsa-miR-3132	1	0	0
chr17:28616954\|28617093	hsa-miR-3137	1	0	0
chr17:28616954\|28617093	hsa-miR-3976	0	1	0
chr17:28616954\|28617093	hsa-miR-4739	1	0	0
chr17:28616954\|28617093	hsa-miR-5191	0	1	0
chr17:28616954\|28617093	hsa-miR-128-1-5p	1	1	0
chr17:28616954\|28617093	hsa-miR-4722-5p	0	1	0
chr17:28616954\|28617093	hsa-miR-3667-3p	0	1	0
chr17:28616954\|28617093	hsa-miR-3158-5p	0	1	0
chr17:28616954\|28617093	hsa-miR-6868-5p	0	1	0
chr17:28616954\|28617093	hsa-miR-5197-3p	0	1	0
chr17:28616954\|28617093	hsa-miR-3670	0	1	0
chr17:28616954\|28617093	hsa-miR-4763-3p	1	0	0
chr17:28616954\|28617093	hsa-miR-6726-5p	1	1	0
chr17:28616954\|28617093	hsa-miR-4697-5p	1	0	0
chr17:28616954\|28617093	hsa-miR-6831-5p	1	0	0
chr17:28616954\|28617093	hsa-miR-4769-5p	1	1	0
chr17:28616954\|28617093	hsa-miR-6856-5p	0	1	0
chr17:28616954\|28617093	hsa-miR-6762-5p	1	0	0
chr17:28616954\|28617093	hsa-miR-4722-3p	1	0	0
chr17:28616954\|28617093	hsa-miR-6817-5p	0	1	0
chr17:28616954\|28617093	hsa-miR-128-2-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:28616954\|28617093
ORF Type	ORF1
Protein Length	36
Nucleotide Length	108
Protein Sequence	MWVALWQEGHWVGLFFTLYPTGSTAAPELLPVWATA
Nucleotide Sequence	TTGTGGGTTGCTTTATGGCAGGAAGGACATTGGGTTGGGCTCTTCTTTACTCTCTATCCTACAGGTAGTACTGCGGCCCCAGAGCTCCTGCCAGTCTGGGCGACAGCT

CircID	chr17:28616954\|28617093
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MQRICGLLYGRKDIGLGSSLLSILQVVLRPQSSCQSGRQL
Nucleotide Sequence	CTGCAGAGGATTTGTGGGTTGCTTTATGGCAGGAAGGACATTGGGTTGGGCTCTTCTTTACTCTCTATCCTACAGGTAGTACTGCGGCCCCAGAGCTCCTGCCAGTCTGGGCGACAGCTA

CircID	chr17:28616954\|28617093
ORF Type	ORF3
Protein Length	31
Nucleotide Length	96
Protein Sequence	LLLLSFCRGFVGCFMAGRTLGWALLYSLSYR
Nucleotide Sequence	TTGCTTCTCCTCTCATTCTGCAGAGGATTTGTGGGTTGCTTTATGGCAGGAAGGACATTGGGTTGGGCTCTTCTTTACTCTCTATCCTACAGGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information