CircRNA Information

General Information
circRNA Basic Information
CircID chr17:28912803|28913013
Strand +
CircType exon
Host Gene ENSG00000109118.12;
Algorism CIRI2;
Sequence ATCGGCTGCAGTTCTTGTGCGGAAAAATCCAAGAAAACCCCTTGTGGGACTGCCAATGGGCCAGTGAACACAGAGGTGAAAGCTAATGGCCCACACCTCTACAGCAGCCCTACTGATTCCACGGACCCCCGGCGACTTCCAGGCGCTAACACCCCACTACCAGGCCTCTCACACCGGCAAGGCTGGCCCCGGCCCCTCACGCCACCAGCGG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:28912803|28913013 hsa-miR-34a-5p 0 0 1
chr17:28912803|28913013 hsa-miR-34a-3p 0 0 1
chr17:28912803|28913013 hsa-miR-449a 0 0 1
chr17:28912803|28913013 hsa-miR-432-5p 0 0 1
chr17:28912803|28913013 hsa-miR-432-3p 0 0 1
chr17:28912803|28913013 hsa-miR-193b-5p 0 0 1
chr17:28912803|28913013 hsa-miR-193b-3p 0 0 1
chr17:28912803|28913013 hsa-miR-578 0 0 1
chr17:28912803|28913013 hsa-miR-608 1 0 1
chr17:28912803|28913013 hsa-miR-609 0 0 1
chr17:28912803|28913013 hsa-miR-449b-5p 0 0 1
chr17:28912803|28913013 hsa-miR-449b-3p 0 0 1
chr17:28912803|28913013 hsa-miR-936 0 0 1
chr17:28912803|28913013 hsa-miR-1290 0 0 1
chr17:28912803|28913013 hsa-miR-615-5p 0 0 1
chr17:28912803|28913013 hsa-miR-1184 0 0 1
chr17:28912803|28913013 hsa-miR-423-5p 0 1 1
chr17:28912803|28913013 hsa-miR-188-3p 0 1 1
chr17:28912803|28913013 hsa-miR-199b-3p 0 0 1
chr17:28912803|28913013 hsa-miR-199a-3p 0 0 1
chr17:28912803|28913013 hsa-miR-342-5p 0 0 1
chr17:28912803|28913013 hsa-miR-34c-5p 0 0 1
chr17:28912803|28913013 hsa-miR-509-3-5p 0 0 1
chr17:28912803|28913013 hsa-miR-509-5p 0 0 1
chr17:28912803|28913013 hsa-miR-876-5p 0 0 1
chr17:28912803|28913013 hsa-miR-193a-3p 1 1 1
chr17:28912803|28913013 hsa-miR-138 0 0 1
chr17:28912803|28913013 hsa-miR-1254 0 0 1
chr17:28912803|28913013 hsa-miR-637 1 0 0
chr17:28912803|28913013 hsa-miR-762 1 1 0
chr17:28912803|28913013 hsa-miR-1268a 1 0 0
chr17:28912803|28913013 hsa-miR-2861 1 1 0
chr17:28912803|28913013 hsa-miR-3188 1 0 0
chr17:28912803|28913013 hsa-miR-4259 1 0 0
chr17:28912803|28913013 hsa-miR-4270 1 0 0
chr17:28912803|28913013 hsa-miR-1268b 1 0 0
chr17:28912803|28913013 hsa-miR-4440 1 0 0
chr17:28912803|28913013 hsa-miR-3689c 1 0 0
chr17:28912803|28913013 hsa-miR-4488 1 0 0
chr17:28912803|28913013 hsa-miR-4489 1 0 0
chr17:28912803|28913013 hsa-miR-4538 1 0 0
chr17:28912803|28913013 hsa-miR-4651 1 0 0
chr17:28912803|28913013 hsa-miR-4656 1 0 0
chr17:28912803|28913013 hsa-miR-4710 1 0 0
chr17:28912803|28913013 hsa-miR-4741 1 0 0
chr17:28912803|28913013 hsa-miR-5572 1 0 0
chr17:28912803|28913013 hsa-miR-5787 1 0 0
chr17:28912803|28913013 hsa-miR-6085 1 0 0
chr17:28912803|28913013 hsa-miR-6133 1 0 0
chr17:28912803|28913013 hsa-miR-8073 1 0 0
chr17:28912803|28913013 hsa-miR-9901 1 0 0
chr17:28912803|28913013 hsa-miR-12119 1 0 0
chr17:28912803|28913013 hsa-miR-138-5p 1 1 0
chr17:28912803|28913013 hsa-miR-370-3p 1 0 0
chr17:28912803|28913013 hsa-miR-92a-2-5p 1 0 0
chr17:28912803|28913013 hsa-miR-128-1-5p 1 1 0
chr17:28912803|28913013 hsa-miR-4731-5p 1 0 0
chr17:28912803|28913013 hsa-miR-124-5p 0 1 0
chr17:28912803|28913013 hsa-miR-7114-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6089 1 0 0
chr17:28912803|28913013 hsa-miR-3192-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6727-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6759-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6721-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6742-5p 1 0 0
chr17:28912803|28913013 hsa-miR-3151-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6772-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6796-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6829-5p 1 1 0
chr17:28912803|28913013 hsa-miR-6732-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6782-5p 1 0 0
chr17:28912803|28913013 hsa-miR-5008-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6786-5p 1 0 0
chr17:28912803|28913013 hsa-miR-1226-5p 1 0 0
chr17:28912803|28913013 hsa-miR-4783-3p 1 0 0
chr17:28912803|28913013 hsa-miR-6784-5p 1 0 0
chr17:28912803|28913013 hsa-miR-4640-5p 1 0 0
chr17:28912803|28913013 hsa-miR-5004-3p 0 1 0
chr17:28912803|28913013 hsa-miR-6757-3p 1 0 0
chr17:28912803|28913013 hsa-miR-6771-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6749-5p 1 0 0
chr17:28912803|28913013 hsa-miR-4787-5p 0 1 0
chr17:28912803|28913013 hsa-miR-4446-3p 1 0 0
chr17:28912803|28913013 hsa-miR-937-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6781-5p 1 1 0
chr17:28912803|28913013 hsa-miR-194-3p 1 1 0
chr17:28912803|28913013 hsa-miR-1233-5p 1 0 0
chr17:28912803|28913013 hsa-miR-3689b-3p 1 0 0
chr17:28912803|28913013 hsa-miR-4763-3p 1 0 0
chr17:28912803|28913013 hsa-miR-6778-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6787-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6812-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6816-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6775-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6737-5p 1 1 0
chr17:28912803|28913013 hsa-miR-6752-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6756-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6803-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6813-5p 1 1 0
chr17:28912803|28913013 hsa-miR-6815-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6819-5p 1 1 0
chr17:28912803|28913013 hsa-miR-6851-5p 1 0 0
chr17:28912803|28913013 hsa-miR-7107-5p 1 0 0
chr17:28912803|28913013 hsa-miR-7110-5p 1 0 0
chr17:28912803|28913013 hsa-miR-10401-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6751-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6779-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6780a-5p 1 0 0
chr17:28912803|28913013 hsa-miR-3620-5p 1 0 0
chr17:28912803|28913013 hsa-miR-10396b-5p 1 0 0
chr17:28912803|28913013 hsa-miR-1237-5p 1 0 0
chr17:28912803|28913013 hsa-miR-328-5p 1 0 0
chr17:28912803|28913013 hsa-miR-3689a-3p 1 0 0
chr17:28912803|28913013 hsa-miR-4726-5p 1 1 0
chr17:28912803|28913013 hsa-miR-4745-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6846-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6848-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6889-5p 1 0 0
chr17:28912803|28913013 hsa-miR-6845-5p 1 0 0
chr17:28912803|28913013 hsa-miR-4758-5p 1 0 0
chr17:28912803|28913013 hsa-miR-3116 0 1 0
chr17:28912803|28913013 hsa-miR-6785-5p 1 0 0
chr17:28912803|28913013 hsa-miR-3184-5p 1 1 0
chr17:28912803|28913013 hsa-miR-6762-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:28912803|28913013
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MAHTSTAALLIPRTPGDFQALTPHYQASHTGKAGPGPSRHQR
Nucleotide Sequence ATGGCCCACACCTCTACAGCAGCCCTACTGATTCCACGGACCCCCGGCGACTTCCAGGCGCTAACACCCCACTACCAGGCCTCTCACACCGGCAAGGCTGGCCCCGGCCCCTCACGCCACCAGCGG
CircID chr17:28912803|28913013
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MQFLCGKIQENPLWDCQWASEHRGES
Nucleotide Sequence CTGCAGTTCTTGTGCGGAAAAATCCAAGAAAACCCCTTGTGGGACTGCCAATGGGCCAGTGAACACAGAGGTGAAAGCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab