CircNet

General Information

circRNA Basic Information

CircID	chr17:28979680\|28982039
Strand	-
CircType	exon
Host Gene	ENSG00000063015.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	GACTCTCTTTAGAGGCCCCAACCGTGGGGAAAGGACAAGCCCCAGGCATCGAGGAGACAGATGGCGAGCTGACAGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGCCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGAATTCCTACAAGAGGGGCTGGAAAAGGGAGATGAGGAGCTGAGGCCAGCACTGCCCTTCCAGCCTGACCCACCTGCACCCTTCACCCCAAGTCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCCCTGTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGAGGGACCCTGGAGTCCGGAGTCAGAGTCCCCTATGCTTCGAATCACAGCTCCCCTACCTCCAGGGCCCAGCATGGCAGTGCCCACCCTAGGCCCAGGGGAGATAGCCAGCACTACACCCCCCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCTGGAGACATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAGGGGACCATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAGACCACCACTACCACCACCATCATCACCACCACCATCACCACAGTCCAGACACCAGGCCCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCTCTGGACTCCCCTACAGACCTCAGCTCCCCCACTGATGTTGGCCTGGACTGCTTCTTCTACATCTCTGTCTACCCTGGCTATGGCGTGGAAATCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr17:28979680\|28982039	hsa-miR-103a-2-5p	1	1
chr17:28979680\|28982039	hsa-miR-197-3p	1	1
chr17:28979680\|28982039	hsa-miR-181a-2-3p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:28979680\|28982039
ORF Type	ORF1
Protein Length	260
Nucleotide Length	780
Protein Sequence	VGKGQAPGIEETDGELTAAPTPEQPERGVHFVTTAPTLKLLNHHPLLEEFLQEGLEKGDEELRPALPFQPDPPAPFTPSPLPRLANQDSRPVFTSPTPAMAAVPTQPQSKEGPWSPESESPMLRITAPLPPGPSMAVPTLGPGEIASTTPPSRAWTPTQEGPGDMGRPWVAEVVSQGAGIGIQGTITSSTASGDDEETTTTTTIITTTITTVQTPGPCSWNFSGPEGSLDSPTDLSSPTDVGLDCFFYISVYPGYGVEIK
Nucleotide Sequence	GTGGGGAAAGGACAAGCCCCAGGCATCGAGGAGACAGATGGCGAGCTGACAGCAGCCCCCACACCTGAGCAGCCAGAACGAGGCGTCCACTTTGTCACAACAGCCCCCACCTTGAAGCTGCTCAACCACCACCCGCTGCTTGAGGAATTCCTACAAGAGGGGCTGGAAAAGGGAGATGAGGAGCTGAGGCCAGCACTGCCCTTCCAGCCTGACCCACCTGCACCCTTCACCCCAAGTCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCCCTGTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGAGGGACCCTGGAGTCCGGAGTCAGAGTCCCCTATGCTTCGAATCACAGCTCCCCTACCTCCAGGGCCCAGCATGGCAGTGCCCACCCTAGGCCCAGGGGAGATAGCCAGCACTACACCCCCCAGCAGAGCCTGGACACCAACCCAAGAGGGTCCTGGAGACATGGGAAGGCCGTGGGTTGCAGAGGTTGTGTCCCAGGGCGCAGGGATCGGGATCCAGGGGACCATCACCTCCTCCACAGCTTCAGGAGATGATGAGGAGACCACCACTACCACCACCATCATCACCACCACCATCACCACAGTCCAGACACCAGGCCCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCTCTGGACTCCCCTACAGACCTCAGCTCCCCCACTGATGTTGGCCTGGACTGCTTCTTCTACATCTCTGTCTACCCTGGCTATGGCGTGGAAATCAAG

CircID	chr17:28979680\|28982039
ORF Type	ORF2
Protein Length	107
Nucleotide Length	321
Protein Sequence	MAGVGLVKTGRLSWLARRGRGLGVKGAGGSGWKGSAGLSSSSPFSSPSCRNSSSSGWWLSSFKVGAVVTKWTPRSGCSGVGAAVSSPSVSSMPGACPFPTVGASKES
Nucleotide Sequence	ATGGCTGGAGTGGGGCTGGTAAAGACAGGGCGGCTGTCCTGGTTGGCCAGGCGGGGAAGGGGACTTGGGGTGAAGGGTGCAGGTGGGTCAGGCTGGAAGGGCAGTGCTGGCCTCAGCTCCTCATCTCCCTTTTCCAGCCCCTCTTGTAGGAATTCCTCAAGCAGCGGGTGGTGGTTGAGCAGCTTCAAGGTGGGGGCTGTTGTGACAAAGTGGACGCCTCGTTCTGGCTGCTCAGGTGTGGGGGCTGCTGTCAGCTCGCCATCTGTCTCCTCGATGCCTGGGGCTTGTCCTTTCCCCACGGTTGGGGCCTCTAAAGAGAGT

CircID	chr17:28979680\|28982039
ORF Type	ORF3
Protein Length	104
Nucleotide Length	312
Protein Sequence	MVVVMMVVVVVVSSSSPEAVEEVMVPWIPIPAPWDTTSATHGLPMSPGPSWVGVQALLGGVVLAISPGPRVGTAMLGPGGRGAVIRSIGDSDSGLQGPSLDWG*
Nucleotide Sequence	ATGGTGGTGGTGATGATGGTGGTGGTAGTGGTGGTCTCCTCATCATCTCCTGAAGCTGTGGAGGAGGTGATGGTCCCCTGGATCCCGATCCCTGCGCCCTGGGACACAACCTCTGCAACCCACGGCCTTCCCATGTCTCCAGGACCCTCTTGGGTTGGTGTCCAGGCTCTGCTGGGGGGTGTAGTGCTGGCTATCTCCCCTGGGCCTAGGGTGGGCACTGCCATGCTGGGCCCTGGAGGTAGGGGAGCTGTGATTCGAAGCATAGGGGACTCTGACTCCGGACTCCAGGGTCCCTCCTTGGACTGGGGCTGA

CircID	chr17:28979680\|28982039
ORF Type	ORF4
Protein Length	66
Nucleotide Length	198
Protein Sequence	MMRRPPLPPPSSPPPSPQSRHQALVAGISQAQRALWTPLQTSAPPLMLAWTASSTSLSTLAMAWKS
Nucleotide Sequence	ATGATGAGGAGACCACCACTACCACCACCATCATCACCACCACCATCACCACAGTCCAGACACCAGGCCCTTGTAGCTGGAATTTCTCAGGCCCAGAGGGCTCTCTGGACTCCCCTACAGACCTCAGCTCCCCCACTGATGTTGGCCTGGACTGCTTCTTCTACATCTCTGTCTACCCTGGCTATGGCGTGGAAATCA

CircID	chr17:28979680\|28982039
ORF Type	ORF5
Protein Length	78
Nucleotide Length	234
Protein Sequence	GQHCPSSLTHLHPSPQVPFPAWPTRTAALSLPAPLQPWLRYPLSPSPRRDPGVRSQSPLCFESQLPYLQGPAWQCPP*
Nucleotide Sequence	GGCCAGCACTGCCCTTCCAGCCTGACCCACCTGCACCCTTCACCCCAAGTCCCCTTCCCCGCCTGGCCAACCAGGACAGCCGCCCTGTCTTTACCAGCCCCACTCCAGCCATGGCTGCGGTACCCACTCAGCCCCAGTCCAAGGAGGGACCCTGGAGTCCGGAGTCAGAGTCCCCTATGCTTCGAATCACAGCTCCCCTACCTCCAGGGCCCAGCATGGCAGTGCCCACCCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:28979680\|28982039	UCHL5	2	0	0
chr17:28979680\|28982039	FMR1	1	0	0
chr17:28979680\|28982039	U2AF2	18	8	7
chr17:28979680\|28982039	MOV10	1	0	0
chr17:28979680\|28982039	FUS	1	1	2
chr17:28979680\|28982039	NCBP2	1	0	2
chr17:28979680\|28982039	ZRANB2	0	0	3
chr17:28979680\|28982039	FUBP3	1	0	1
chr17:28979680\|28982039	SF3B1	3	0	2
chr17:28979680\|28982039	CELF2	0	0	2
chr17:28979680\|28982039	SRRM4	1	0	0
chr17:28979680\|28982039	YTHDF3	1	0	0
chr17:28979680\|28982039	PRPF8	3	0	2
chr17:28979680\|28982039	YTHDF1	1	0	0
chr17:28979680\|28982039	CPSF7	4	0	5
chr17:28979680\|28982039	CPSF6	1	0	0
chr17:28979680\|28982039	NUDT21	3	0	2
chr17:28979680\|28982039	GPKOW	3	0	2
chr17:28979680\|28982039	CPSF3	2	0	0
chr17:28979680\|28982039	RBM15B	4	0	0
chr17:28979680\|28982039	CPSF1	1	0	0
chr17:28979680\|28982039	ELAVL1	2	5	3
chr17:28979680\|28982039	DGCR8	1	0	1
chr17:28979680\|28982039	QKI	0	0	3
chr17:28979680\|28982039	SRSF1	13	0	2
chr17:28979680\|28982039	CSTF2	2	0	0
chr17:28979680\|28982039	U2AF1	3	0	4
chr17:28979680\|28982039	KHSRP	1	1	9
chr17:28979680\|28982039	TIAL1	2	0	0
chr17:28979680\|28982039	ZNF622	1	0	1
chr17:28979680\|28982039	EFTUD2	1	1	0
chr17:28979680\|28982039	GRWD1	5	0	1
chr17:28979680\|28982039	HNRNPL	0	1	1
chr17:28979680\|28982039	RBM15	11	1	0
chr17:28979680\|28982039	SF3B4	5	0	0
chr17:28979680\|28982039	FIP1L1	0	1	0
chr17:28979680\|28982039	PTBP1	1	0	0
chr17:28979680\|28982039	HNRNPC	12	5	0
chr17:28979680\|28982039	HNRNPD	0	0	1
chr17:28979680\|28982039	NOL12	1	0	0
chr17:28979680\|28982039	DDX3X	3	0	0
chr17:28979680\|28982039	ZC3H7B	3	0	0
chr17:28979680\|28982039	SMNDC1	0	0	1
chr17:28979680\|28982039	HNRNPA1	3	1	0
chr17:28979680\|28982039	SRSF7	2	0	0
chr17:28979680\|28982039	LIN28B	2	0	0
chr17:28979680\|28982039	BCCIP	0	0	1
chr17:28979680\|28982039	NCBP3	1	0	0
chr17:28979680\|28982039	TARDBP	5	0	7
chr17:28979680\|28982039	YTHDC1	1	0	0
chr17:28979680\|28982039	FBL	1	0	0
chr17:28979680\|28982039	BUD13	4	0	3
chr17:28979680\|28982039	RBFOX2	0	0	2
chr17:28979680\|28982039	DDX24	2	0	0
chr17:28979680\|28982039	AARS	0	0	1
chr17:28979680\|28982039	CSTF2T	2	0	1
chr17:28979680\|28982039	FXR2	1	0	0
chr17:28979680\|28982039	TIA1	2	0	6
chr17:28979680\|28982039	SF3A3	1	0	0
chr17:28979680\|28982039	RBM22	2	0	1
chr17:28979680\|28982039	WDR33	0	0	3
chr17:28979680\|28982039	DKC1	1	1	0
chr17:28979680\|28982039	PPIG	5	0	2
chr17:28979680\|28982039	AGO2	1	0	0
chr17:28979680\|28982039	EWSR1	2	0	0
chr17:28979680\|28982039	EIF4A3	1	0	2
chr17:28979680\|28982039	SSB	1	0	0

CircRNA Information