CircNet

General Information

circRNA Basic Information

CircID	chr17:30324829\|30324948
Strand	+
CircType	exon
Host Gene	ENSG00000182271.11;
Algorism	CIRI2;
Sequence	CAAATCCAACAGACAAGTGAGTCTTTTCAGCTGTCAATCACCAAAGTCGAGAAGCCTGACAACGGAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAACGGAGAGCTTGGACTTTCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:30324829\|30324948	hsa-miR-143-5p	0	0	1
chr17:30324829\|30324948	hsa-miR-143-3p	0	0	1
chr17:30324829\|30324948	hsa-miR-484	0	0	1
chr17:30324829\|30324948	hsa-miR-632	0	0	1
chr17:30324829\|30324948	hsa-miR-1183	1	1	1
chr17:30324829\|30324948	hsa-miR-1231	0	0	1
chr17:30324829\|30324948	hsa-miR-1290	0	0	1
chr17:30324829\|30324948	hsa-miR-1267	0	0	1
chr17:30324829\|30324948	hsa-miR-516a-5p	0	0	1
chr17:30324829\|30324948	hsa-miR-876-5p	0	0	1
chr17:30324829\|30324948	hsa-miR-450b-5p	0	0	1
chr17:30324829\|30324948	hsa-miR-9	0	0	1
chr17:30324829\|30324948	hsa-miR-4522	1	0	0
chr17:30324829\|30324948	hsa-miR-4770	0	1	0
chr17:30324829\|30324948	hsa-miR-8070	1	1	0
chr17:30324829\|30324948	hsa-miR-9-5p	0	1	0
chr17:30324829\|30324948	hsa-miR-6796-3p	0	1	0
chr17:30324829\|30324948	hsa-miR-6793-5p	1	0	0
chr17:30324829\|30324948	hsa-miR-6755-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:30324829\|30324948
ORF Type	ORF1
Protein Length	30
Nucleotide Length	90
Protein Sequence	MSITKVEKPDNGTYSCIAKSSLKTESLDFH
Nucleotide Sequence	CTGTCAATCACCAAAGTCGAGAAGCCTGACAACGGAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAACGGAGAGCTTGGACTTTCAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information