CircRNA Information

General Information
circRNA Basic Information
CircID chr17:30431772|30442450
Strand +
CircType exon
Host Gene ENSG00000108582.11;
Algorism find_circ;CIRI2;CIRC
Sequence GTTCTTTGGTGGTTAACTACCCTTTTGATGATGATGAACAAGGACTTGCCACATATAGTAAATCACCAGATGATGCTGTGTTCCAACAAATAGCACTTTCTTATTCCAAGGAAAATTCCCAGATGTTTCAAGGTAGACCTTGCAAGAATATGTATCCTAATGAATATTTTCCTCATGGAATAACAAATGGAGCTAGTTGGTATAATGTGCCAGGAGGAATGCAGGACTGGAACTATTTACAAACAAATTGCTTTGAAGTGACTATTGAACTAGGTTGTGTGAAATATCCACTTGAGAAAGAGCTGCCAAACTTTTGGGAACAGAATCGAAGATCACTAATCCAGTTTATGAAACAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:30431772|30442450 hsa-miR-136-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr17:30431772|30442450 MOV10 3 0 0
chr17:30431772|30442450 ELAVL1 5 2 0
chr17:30431772|30442450 SF3B1 2 0 0
chr17:30431772|30442450 PRPF8 0 1 1
chr17:30431772|30442450 YTHDF1 10 0 0
chr17:30431772|30442450 CAPRIN1 2 0 0
chr17:30431772|30442450 FMR1 0 0 3
chr17:30431772|30442450 CPSF6 1 0 0
chr17:30431772|30442450 CSTF2 1 0 0
chr17:30431772|30442450 CPSF3 1 0 0
chr17:30431772|30442450 RBM15B 8 0 0
chr17:30431772|30442450 CPSF1 1 0 0
chr17:30431772|30442450 FUS 1 0 0
chr17:30431772|30442450 DGCR8 1 0 0
chr17:30431772|30442450 SRSF7 0 0 1
chr17:30431772|30442450 SRSF1 0 0 2
chr17:30431772|30442450 NOP58 0 0 1
chr17:30431772|30442450 U2AF1 1 0 0
chr17:30431772|30442450 U2AF2 7 4 4
chr17:30431772|30442450 ZNF622 1 0 0
chr17:30431772|30442450 RBM10 1 0 0
chr17:30431772|30442450 PCBP2 4 0 1
chr17:30431772|30442450 TROVE2 0 1 0
chr17:30431772|30442450 RBM15 11 0 1
chr17:30431772|30442450 FIP1L1 1 0 0
chr17:30431772|30442450 PTBP1 24 2 2
chr17:30431772|30442450 HNRNPC 15 8 0
chr17:30431772|30442450 TRA2A 0 0 1
chr17:30431772|30442450 ZNF184 0 0 1
chr17:30431772|30442450 DDX3X 8 0 0
chr17:30431772|30442450 SMNDC1 0 0 2
chr17:30431772|30442450 HNRNPA1 1 5 0
chr17:30431772|30442450 LIN28B 5 0 11
chr17:30431772|30442450 LIN28A 0 0 1
chr17:30431772|30442450 FXR1 1 0 3
chr17:30431772|30442450 SND1 2 0 1
chr17:30431772|30442450 IGF2BP1 3 0 1
chr17:30431772|30442450 IGF2BP3 8 0 0
chr17:30431772|30442450 IGF2BP2 6 1 4
chr17:30431772|30442450 TARDBP 1 0 0
chr17:30431772|30442450 YTHDC1 4 0 0
chr17:30431772|30442450 DICER1 0 0 1
chr17:30431772|30442450 RBM47 1 0 2
chr17:30431772|30442450 YTHDF2 9 0 0
chr17:30431772|30442450 CSTF2T 0 0 1
chr17:30431772|30442450 RBPMS 1 0 0
chr17:30431772|30442450 GEMIN5 1 0 0
chr17:30431772|30442450 CPSF7 2 0 0
chr17:30431772|30442450 ILF3 2 0 2
chr17:30431772|30442450 WDR33 1 0 0
chr17:30431772|30442450 RTCB 1 0 0
chr17:30431772|30442450 FBL 1 1 1
chr17:30431772|30442450 ATXN2 1 0 0
chr17:30431772|30442450 EIF4A3 0 1 6
chr17:30431772|30442450 AGO2 0 0 2