CircRNA Information

General Information
circRNA Basic Information
CircID chr17:32493367|32493500
Strand -
CircType exon
Host Gene ENSG00000176658.15;
Algorism CIRI2;
Sequence ACAGGCACTTGGTGGGTTCTGCCGGGTCAGGGTGGGAAGGCAGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCTGCCCACTCCACCTGAGGCGTTGGCTCCCTCCCC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:32493367|32493500 hsa-miR-122-5p 0 0 1
chr17:32493367|32493500 hsa-miR-122-3p 0 0 1
chr17:32493367|32493500 hsa-miR-519e-5p 0 0 1
chr17:32493367|32493500 hsa-miR-519e-3p 0 0 1
chr17:32493367|32493500 hsa-miR-614 0 0 1
chr17:32493367|32493500 hsa-miR-1247-5p 0 0 1
chr17:32493367|32493500 hsa-miR-1247-3p 0 0 1
chr17:32493367|32493500 hsa-miR-127-5p 0 0 1
chr17:32493367|32493500 hsa-miR-125a-3p 0 0 1
chr17:32493367|32493500 hsa-miR-941 0 1 1
chr17:32493367|32493500 hsa-miR-1224-3p 0 0 1
chr17:32493367|32493500 hsa-miR-188-3p 0 0 1
chr17:32493367|32493500 hsa-miR-515-3p 0 0 1
chr17:32493367|32493500 hsa-miR-1260 0 0 1
chr17:32493367|32493500 hsa-miR-1280 0 0 1
chr17:32493367|32493500 hsa-miR-550 0 0 1
chr17:32493367|32493500 hsa-miR-650 1 0 0
chr17:32493367|32493500 hsa-miR-663b 1 0 0
chr17:32493367|32493500 hsa-miR-1260a 0 1 0
chr17:32493367|32493500 hsa-miR-1976 0 1 0
chr17:32493367|32493500 hsa-miR-548v 0 1 0
chr17:32493367|32493500 hsa-miR-1260b 0 1 0
chr17:32493367|32493500 hsa-miR-3685 0 1 0
chr17:32493367|32493500 hsa-miR-4481 0 1 0
chr17:32493367|32493500 hsa-miR-4510 1 0 0
chr17:32493367|32493500 hsa-miR-4656 1 0 0
chr17:32493367|32493500 hsa-miR-4706 1 0 0
chr17:32493367|32493500 hsa-miR-4739 1 0 0
chr17:32493367|32493500 hsa-miR-6090 1 0 0
chr17:32493367|32493500 hsa-miR-6127 1 0 0
chr17:32493367|32493500 hsa-miR-12114 0 1 0
chr17:32493367|32493500 hsa-miR-12129 0 1 0
chr17:32493367|32493500 hsa-miR-103a-2-5p 0 1 0
chr17:32493367|32493500 hsa-miR-6747-3p 0 1 0
chr17:32493367|32493500 hsa-miR-6825-5p 0 1 0
chr17:32493367|32493500 hsa-miR-6873-5p 0 1 0
chr17:32493367|32493500 hsa-miR-6880-5p 0 1 0
chr17:32493367|32493500 hsa-miR-6875-3p 0 1 0
chr17:32493367|32493500 hsa-miR-4725-5p 1 0 0
chr17:32493367|32493500 hsa-miR-6805-5p 1 0 0
chr17:32493367|32493500 hsa-miR-6827-5p 1 0 0
chr17:32493367|32493500 hsa-miR-6760-5p 1 0 0
chr17:32493367|32493500 hsa-miR-2467-3p 0 1 0
chr17:32493367|32493500 hsa-miR-6765-3p 1 0 0
chr17:32493367|32493500 hsa-miR-1229-5p 0 1 0
chr17:32493367|32493500 hsa-miR-149-3p 1 0 0
chr17:32493367|32493500 hsa-miR-339-5p 1 0 0
chr17:32493367|32493500 hsa-miR-4732-3p 0 1 0
chr17:32493367|32493500 hsa-miR-6738-3p 0 1 0
chr17:32493367|32493500 hsa-miR-7152-5p 0 1 0
chr17:32493367|32493500 hsa-miR-3620-3p 0 1 0
chr17:32493367|32493500 hsa-miR-6734-3p 0 1 0
chr17:32493367|32493500 hsa-miR-1207-5p 1 0 0
chr17:32493367|32493500 hsa-miR-1343-5p 1 0 0
chr17:32493367|32493500 hsa-miR-6726-5p 1 0 0
chr17:32493367|32493500 hsa-miR-1249-5p 1 1 0
chr17:32493367|32493500 hsa-miR-6797-5p 1 0 0
chr17:32493367|32493500 hsa-miR-4685-3p 0 1 0
chr17:32493367|32493500 hsa-miR-4728-5p 1 0 0
chr17:32493367|32493500 hsa-miR-328-5p 1 0 0
chr17:32493367|32493500 hsa-miR-6795-5p 1 0 0
chr17:32493367|32493500 hsa-miR-6887-5p 1 0 0
chr17:32493367|32493500 hsa-miR-4723-5p 1 0 0
chr17:32493367|32493500 hsa-miR-939-5p 1 1 0
chr17:32493367|32493500 hsa-miR-6758-5p 0 1 0
chr17:32493367|32493500 hsa-miR-6856-5p 0 1 0
chr17:32493367|32493500 hsa-miR-4747-5p 1 0 0
chr17:32493367|32493500 hsa-miR-6785-5p 1 1 0
chr17:32493367|32493500 hsa-miR-5591-5p 1 1 0
chr17:32493367|32493500 hsa-miR-4722-3p 0 1 0
chr17:32493367|32493500 hsa-miR-6500-5p 0 1 0
chr17:32493367|32493500 hsa-miR-103a-1-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr17:32493367|32493500
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MPGQGGKAGEVSVAGREEASVHPSLAPLPTPPEALAPS
Nucleotide Sequence CTGCCGGGTCAGGGTGGGAAGGCAGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCTGCCCACTCCACCTGAGGCGTTGGCTCCCTCC
CircID chr17:32493367|32493500
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MWQDGKKLQYIPLLHLCPLHLRRWLPP
Nucleotide Sequence CTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCTGCCCACTCCACCTGAGGCGTTGGCTCCCTCCC
CircID chr17:32493367|32493500
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MVGSAGSGWEGRRSVCGRTGRSFSTSLSCTSAHST
Nucleotide Sequence TTGGTGGGTTCTGCCGGGTCAGGGTGGGAAGGCAGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCTGCCCACTCCACCTGA
CircID chr17:32493367|32493500
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MKLLPVLPQTLLLPSHPDPAEPTKCL
Nucleotide Sequence CTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCTGCCTTCCCACCCTGACCCGGCAGAACCCACCAAGTGCCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab