CircRNA Information

General Information
circRNA Basic Information
CircID chr17:32943934|32944130
Strand -
CircType exon
Host Gene ENSG00000006042.10;
Algorism CIRI2;
Sequence AGTAGGGAGAGTAGCCTTGTCCCTGCCCCACTACAAGTCTGTTCATATGAAGACATACAAAGCCGTCGCCTCTAATCAGTGTTCAAAGGGTCGATTGTGCAACTCACATTCCTCCAGAGAAATTCCCCCAGCTTGTGAGATCTCCAAGAGGGAACACGTATTCCTGGCATCCAACTTCCCCTGGTGCTCCCCCTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr17:32943934|32944130 hsa-miR-29a-5p 0 0 1
chr17:32943934|32944130 hsa-miR-29a-3p 0 0 1
chr17:32943934|32944130 hsa-miR-141-5p 0 0 1
chr17:32943934|32944130 hsa-miR-141-3p 0 0 1
chr17:32943934|32944130 hsa-miR-206 0 0 1
chr17:32943934|32944130 hsa-miR-29c-5p 0 0 1
chr17:32943934|32944130 hsa-miR-29c-3p 0 0 1
chr17:32943934|32944130 hsa-miR-200a-5p 0 0 1
chr17:32943934|32944130 hsa-miR-200a-3p 0 0 1
chr17:32943934|32944130 hsa-miR-326 0 0 1
chr17:32943934|32944130 hsa-miR-432-5p 0 0 1
chr17:32943934|32944130 hsa-miR-432-3p 0 0 1
chr17:32943934|32944130 hsa-miR-551a 0 0 1
chr17:32943934|32944130 hsa-miR-567 0 0 1
chr17:32943934|32944130 hsa-miR-551b-5p 0 0 1
chr17:32943934|32944130 hsa-miR-551b-3p 0 0 1
chr17:32943934|32944130 hsa-miR-571 0 0 1
chr17:32943934|32944130 hsa-miR-613 0 0 1
chr17:32943934|32944130 hsa-miR-620 0 0 1
chr17:32943934|32944130 hsa-miR-625-5p 0 0 1
chr17:32943934|32944130 hsa-miR-625-3p 0 0 1
chr17:32943934|32944130 hsa-miR-637 0 0 1
chr17:32943934|32944130 hsa-miR-765 0 0 1
chr17:32943934|32944130 hsa-miR-877-5p 0 0 1
chr17:32943934|32944130 hsa-miR-877-3p 0 0 1
chr17:32943934|32944130 hsa-miR-939-5p 0 0 1
chr17:32943934|32944130 hsa-miR-939-3p 0 0 1
chr17:32943934|32944130 hsa-miR-297 0 0 1
chr17:32943934|32944130 hsa-miR-1270 0 1 1
chr17:32943934|32944130 hsa-miR-1275 0 0 1
chr17:32943934|32944130 hsa-miR-513b-5p 0 0 1
chr17:32943934|32944130 hsa-miR-513b-3p 0 0 1
chr17:32943934|32944130 hsa-miR-486-3p 1 0 1
chr17:32943934|32944130 hsa-miR-654-3p 0 0 1
chr17:32943934|32944130 hsa-miR-1207-5p 0 0 1
chr17:32943934|32944130 hsa-miR-330-5p 0 0 1
chr17:32943934|32944130 hsa-miR-342-3p 0 0 1
chr17:32943934|32944130 hsa-miR-142-3p 0 0 1
chr17:32943934|32944130 hsa-miR-642 0 0 1
chr17:32943934|32944130 hsa-miR-1 0 0 1
chr17:32943934|32944130 hsa-miR-516b 0 0 1
chr17:32943934|32944130 hsa-miR-219-1-3p 0 0 1
chr17:32943934|32944130 hsa-miR-29b 0 0 1
chr17:32943934|32944130 hsa-miR-638 1 0 0
chr17:32943934|32944130 hsa-miR-663a 1 0 0
chr17:32943934|32944130 hsa-miR-3188 1 0 0
chr17:32943934|32944130 hsa-miR-3196 1 0 0
chr17:32943934|32944130 hsa-miR-3197 1 0 0
chr17:32943934|32944130 hsa-miR-3937 1 0 0
chr17:32943934|32944130 hsa-miR-4443 1 0 0
chr17:32943934|32944130 hsa-miR-4467 1 0 0
chr17:32943934|32944130 hsa-miR-4525 1 0 0
chr17:32943934|32944130 hsa-miR-3960 1 0 0
chr17:32943934|32944130 hsa-miR-4689 1 0 0
chr17:32943934|32944130 hsa-miR-4706 1 0 0
chr17:32943934|32944130 hsa-miR-5698 1 1 0
chr17:32943934|32944130 hsa-miR-5787 1 0 0
chr17:32943934|32944130 hsa-miR-6090 1 0 0
chr17:32943934|32944130 hsa-miR-6129 1 0 0
chr17:32943934|32944130 hsa-miR-8055 1 1 0
chr17:32943934|32944130 hsa-miR-8072 1 0 0
chr17:32943934|32944130 hsa-miR-12115 1 0 0
chr17:32943934|32944130 hsa-miR-12128 1 0 0
chr17:32943934|32944130 hsa-miR-4731-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6825-5p 1 1 0
chr17:32943934|32944130 hsa-miR-6894-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6721-5p 0 1 0
chr17:32943934|32944130 hsa-miR-7845-5p 0 1 0
chr17:32943934|32944130 hsa-miR-6742-5p 1 0 0
chr17:32943934|32944130 hsa-miR-3151-5p 1 1 0
chr17:32943934|32944130 hsa-miR-6805-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6827-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6798-5p 1 1 0
chr17:32943934|32944130 hsa-miR-6782-5p 1 0 0
chr17:32943934|32944130 hsa-miR-30b-3p 1 0 0
chr17:32943934|32944130 hsa-miR-6786-5p 1 0 0
chr17:32943934|32944130 hsa-miR-7109-5p 1 0 0
chr17:32943934|32944130 hsa-miR-4640-5p 1 0 0
chr17:32943934|32944130 hsa-miR-885-3p 1 0 0
chr17:32943934|32944130 hsa-miR-3127-5p 1 0 0
chr17:32943934|32944130 hsa-miR-1228-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6771-5p 1 0 0
chr17:32943934|32944130 hsa-miR-642b-5p 0 1 0
chr17:32943934|32944130 hsa-miR-6824-5p 1 1 0
chr17:32943934|32944130 hsa-miR-516b-5p 0 1 0
chr17:32943934|32944130 hsa-miR-3065-3p 1 0 0
chr17:32943934|32944130 hsa-miR-7112-5p 1 0 0
chr17:32943934|32944130 hsa-miR-4708-3p 0 1 0
chr17:32943934|32944130 hsa-miR-3191-3p 1 0 0
chr17:32943934|32944130 hsa-miR-4695-3p 0 1 0
chr17:32943934|32944130 hsa-miR-1296-3p 0 1 0
chr17:32943934|32944130 hsa-miR-518c-5p 1 1 0
chr17:32943934|32944130 hsa-miR-181d-3p 1 1 0
chr17:32943934|32944130 hsa-miR-514a-5p 1 0 0
chr17:32943934|32944130 hsa-miR-499b-5p 0 1 0
chr17:32943934|32944130 hsa-miR-10400-5p 1 0 0
chr17:32943934|32944130 hsa-miR-4763-3p 1 1 0
chr17:32943934|32944130 hsa-miR-6816-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6870-5p 1 1 0
chr17:32943934|32944130 hsa-miR-1343-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6726-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6743-5p 1 1 0
chr17:32943934|32944130 hsa-miR-6752-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6756-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6803-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6763-5p 1 0 0
chr17:32943934|32944130 hsa-miR-7111-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6780b-5p 1 1 0
chr17:32943934|32944130 hsa-miR-10396b-5p 1 0 0
chr17:32943934|32944130 hsa-miR-1237-5p 1 0 0
chr17:32943934|32944130 hsa-miR-1909-3p 1 1 0
chr17:32943934|32944130 hsa-miR-328-5p 1 0 0
chr17:32943934|32944130 hsa-miR-4685-5p 1 0 0
chr17:32943934|32944130 hsa-miR-4725-3p 1 0 0
chr17:32943934|32944130 hsa-miR-4745-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6729-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6794-5p 1 1 0
chr17:32943934|32944130 hsa-miR-6795-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6887-5p 1 0 0
chr17:32943934|32944130 hsa-miR-6889-5p 1 0 0
chr17:32943934|32944130 hsa-miR-4697-5p 1 0 0
chr17:32943934|32944130 hsa-miR-4723-5p 1 1 0
chr17:32943934|32944130 hsa-miR-6885-5p 1 0 0
chr17:32943934|32944130 hsa-miR-10394-3p 1 0 0
chr17:32943934|32944130 hsa-miR-6731-5p 1 0 0
chr17:32943934|32944130 hsa-miR-4716-3p 1 0 0
chr17:32943934|32944130 hsa-miR-6785-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr17:32943934|32944130
ORF Type ORF1
Protein Length 59
Nucleotide Length 180
Protein Sequence MSLPHYKSVHMKTYKAVASNQCSKGRLCNSHSSREIPPACEISKREHVFLASNFPWCSP
Nucleotide Sequence TTGTCCCTGCCCCACTACAAGTCTGTTCATATGAAGACATACAAAGCCGTCGCCTCTAATCAGTGTTCAAAGGGTCGATTGTGCAACTCACATTCCTCCAGAGAAATTCCCCCAGCTTGTGAGATCTCCAAGAGGGAACACGTATTCCTGGCATCCAACTTCCCCTGGTGCTCCCCCTGA
CircID chr17:32943934|32944130
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MPGIRVPSWRSHKLGEFLWRNVSCTIDPLNTD
Nucleotide Sequence ATGCCAGGAATACGTGTTCCCTCTTGGAGATCTCACAAGCTGGGGGAATTTCTCTGGAGGAATGTGAGTTGCACAATCGACCCTTTGAACACTGATTAG
CircID chr17:32943934|32944130
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MIRGDGFVCLHMNRLVVGQGQGYSPY
Nucleotide Sequence CTGATTAGAGGCGACGGCTTTGTATGTCTTCATATGAACAGACTTGTAGTGGGGCAGGGACAAGGCTACTCTCCCTAC
CircID chr17:32943934|32944130
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MDARNTCSLLEISQAGGISLEECELHNRPFEH
Nucleotide Sequence TTGGATGCCAGGAATACGTGTTCCCTCTTGGAGATCTCACAAGCTGGGGGAATTTCTCTGGAGGAATGTGAGTTGCACAATCGACCCTTTGAACACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab