CircNet

General Information

circRNA Basic Information

CircID	chr17:34942796\|34954599
Strand	-
CircType	exon
Host Gene	ENSG00000132141.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTGTGGTGGATTCTGTTTTGGCTGTTAGAAGACCAGGTTACCCTATTGATCTCTTCATGGTAGAAATAATGGAGATGAAGCATAAATTAGGAACAGATACAAAGTTGATCCAAGGATTAGTTTTGGATCATGGTGCCCGTCATCCAGATATGAAGAAGCGAGTAGAAGATGCATTTATCCTTATTTGCAACGTTTCACTGGAATATGAAAAAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr17:34942796\|34954599	hsa-miR-143-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:34942796\|34954599
ORF Type	ORF1
Protein Length	52
Nucleotide Length	156
Protein Sequence	MVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYEK
Nucleotide Sequence	ATGGTAGAAATAATGGAGATGAAGCATAAATTAGGAACAGATACAAAGTTGATCCAAGGATTAGTTTTGGATCATGGTGCCCGTCATCCAGATATGAAGAAGCGAGTAGAAGATGCATTTATCCTTATTTGCAACGTTTCACTGGAATATGAAAAA

CircID	chr17:34942796\|34954599
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MHLLLASSYLDDGHHDPKLILGSTLYLFLIYASSPLFLP*
Nucleotide Sequence	ATGCATCTTCTACTCGCTTCTTCATATCTGGATGACGGGCACCATGATCCAAAACTAATCCTTGGATCAACTTTGTATCTGTTCCTAATTTATGCTTCATCTCCATTATTTCTACCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:34942796\|34954599	RBFOX2	1	0	0
chr17:34942796\|34954599	NOP58	0	1	0
chr17:34942796\|34954599	U2AF2	0	4	0
chr17:34942796\|34954599	HNRNPC	0	1	0
chr17:34942796\|34954599	EIF4A3	0	1	2
chr17:34942796\|34954599	ELAVL1	2	1	0

CircRNA Information