CircNet

General Information

circRNA Basic Information

CircID	chr17:35820332\|35834598
Strand	+
CircType	exon
Host Gene	ENSG00000270647.5;
Algorism	find_circ;CIRI2;CIRC
Sequence	GTTATTCACAGTCCTATGGTGGTTATGAGAATCAAAAGCAGAGCTCATATAGCCAGCAACCATATAATAACCAGGGACAGCAGCAAAACATGGAATCATCAGGAAGCCAAGGTGGAAGAGCACCTTCCTATGACCAGCCAGACTATGGTCAACAAGATTCATATGACCAGCAGTCAGGCTATGATCAACATCAAGGCTCATATGATGAGCAGTCAAATTATGATCAGCAGCATGATTCCTATAGTCAAAACCAGCAGTCCTATCATTCACAAAGGGAAAACTACAGCCACCACACACAAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAGCTTGCAGTGAGCCGAGATTGCATCAGTGCACTCCAGCCTGGGCTACAGAGCGAGACTCTTGTCTCCAAAAAAAATGACCGTCGTGATGTGAGTAGGTATGGAGAAGATAATAGAGGATATGGCGGGTCACAGGGAGGAGGTAGAGGGCGTGGGGGATATGACAAGGATGGAAGAGGTCCTATGACAGGATCAAGGTAAGTATGTAGATAAAGATGCGTACATTTCTTCTTCTTCCTCTTTTTTTTTTTTTTAAGGTGTTACTTGGCTGGATCAATTCCAGCATCTTCGGGAGGCTGACGTGAGAGAATCGCTTGAACCCGGGAGTTGGAGGTTGCAGTGAGCCGAGATTGCACCATTGCACTCCAGCTTGGGCAACAAGAGTGAAACTCTTGTCTCAGAAAAAAAAAAAAAAGTATGCAACTAGCTGGGGGCTGTGACGCGTACCTGTAGTCCCAGCTACTTAGGAGGCTGAGGTGGGAGGATCACTGATGCTCAGGAGTTCGTGACCAGACTAGGCAAAATAGCAAGACACCATCTCAAAAAACAAATAGTCTTTTTTCTTTTTCTCATATTTAGAAAATAACCGTTTGGAAAAAATACTTACTCTAGTTTAGTATTTTTCATGCTGTGCCTCCAGCTTTATGTTATGGTTTAATAGTATCCCTTTGGCTTGGGGTTGGGAAGATTTAGAAATAAGAGTATATTAGATATGTAATAAGCTTGAAAAGACATCTTGTGGAAATAGATCCTTGGGAAAACACTTAGATGGAAACAACATTTAGAACTCTGTGAAATGGAATTTACTGAAAACTTAGAGGTGCTACTGTTTTCCTAAGCACTCTACTTGTGACAGTTAAGTGTAGATTGAGCCCAGGGCTCAGCACATTAGAGACTTAAGGAAGAAATCATTTCTTCAATTTTTCCTCTGCAGTGGTGGTGACCGCGGTGGCTTCAAAAATTTTGGTGTAAATTATTAGGGTTGTCCAATCAGCCTTTACAACCAGAGCTTAACAAAAGTGATACTAGCATAATGCTAAAGTGGCAGGTGCTGTCTAGGACAAGTTAAAGGAAATGTTGACATTCATCTTGATTTCCTAAACTTTAAATAAAACATAATTTATATATTTACTTTGTAAATCTGTGATGGTTGACTTTCAAGGATTTTGGAAGTATTGACTTTTCATGCCTTGGTTTATTACTATTTTTTTTGTTAATGATTTTAAATAAATTGCCTTAAATAGCTCTTTTTTCTTTTCTTTTCCCTTAGGTCACAGGGATTATGGACCCAGAACAGATGCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr17:35820332\|35834598	hsa-miR-29b-1-5p	1	1
chr17:35820332\|35834598	hsa-miR-125b-2-3p	1	1
chr17:35820332\|35834598	hsa-miR-212-5p	1	1
chr17:35820332\|35834598	hsa-miR-215-3p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr17:35820332\|35834598
ORF Type	ORF1
Protein Length	109
Nucleotide Length	327
Protein Sequence	MVVMRIKSRAHIASNHIITRDSSKTWNHQEAKVEEHLPMTSQTMVNKIHMTSSQAMINIKAHMMSSQIMISSMIPIVKTSSPIIHKGKTTATTHKAGEWREPGRQSLQ*
Nucleotide Sequence	ATGGTGGTTATGAGAATCAAAAGCAGAGCTCATATAGCCAGCAACCATATAATAACCAGGGACAGCAGCAAAACATGGAATCATCAGGAAGCCAAGGTGGAAGAGCACCTTCCTATGACCAGCCAGACTATGGTCAACAAGATTCATATGACCAGCAGTCAGGCTATGATCAACATCAAGGCTCATATGATGAGCAGTCAAATTATGATCAGCAGCATGATTCCTATAGTCAAAACCAGCAGTCCTATCATTCACAAAGGGAAAACTACAGCCACCACACACAAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAGCTTGCAGTGA

CircID	chr17:35820332\|35834598
ORF Type	ORF2
Protein Length	76
Nucleotide Length	228
Protein Sequence	MESSGSQGGRAPSYDQPDYGQQDSYDQQSGYDQHQGSYDEQSNYDQQHDSYSQNQQSYHSQRENYSHHTQGRRMA*
Nucleotide Sequence	ATGGAATCATCAGGAAGCCAAGGTGGAAGAGCACCTTCCTATGACCAGCCAGACTATGGTCAACAAGATTCATATGACCAGCAGTCAGGCTATGATCAACATCAAGGCTCATATGATGAGCAGTCAAATTATGATCAGCAGCATGATTCCTATAGTCAAAACCAGCAGTCCTATCATTCACAAAGGGAAAACTACAGCCACCACACACAAGGCAGGAGAATGGCGTGA

CircID	chr17:35820332\|35834598
ORF Type	ORF3
Protein Length	67
Nucleotide Length	201
Protein Sequence	MSLDVDHSLTAGHMNLVDHSLAGHRKVLFHLGFLMIPCFAAVPGYYMVAGYMSSAFDSHNHHRTVNN
Nucleotide Sequence	ATGAGCCTTGATGTTGATCATAGCCTGACTGCTGGTCATATGAATCTTGTTGACCATAGTCTGGCTGGTCATAGGAAGGTGCTCTTCCACCTTGGCTTCCTGATGATTCCATGTTTTGCTGCTGTCCCTGGTTATTATATGGTTGCTGGCTATATGAGCTCTGCTTTTGATTCTCATAACCACCATAGGACTGTGAATAAC

CircID	chr17:35820332\|35834598
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MLELIQPSNTLKKKKRGRRRNVRIFIYILTLILS*
Nucleotide Sequence	ATGCTGGAATTGATCCAGCCAAGTAACACCTTAAAAAAAAAAAAAAGAGGAAGAAGAAGAAATGTACGCATCTTTATCTACATACTTACCTTGATCCTGTCATAG

CircID	chr17:35820332\|35834598
ORF Type	ORF5
Protein Length	33
Nucleotide Length	99
Protein Sequence	MVQSRLTATSNSRVQAILSRQPPEDAGIDPAK*
Nucleotide Sequence	ATGGTGCAATCTCGGCTCACTGCAACCTCCAACTCCCGGGTTCAAGCGATTCTCTCACGTCAGCCTCCCGAAGATGCTGGAATTGATCCAGCCAAGTAA

CircID	chr17:35820332\|35834598
ORF Type	ORF6
Protein Length	30
Nucleotide Length	90
Protein Sequence	MRTFLLLPLFFFFKVLLGWINSSIFGRLT*
Nucleotide Sequence	ATGCGTACATTTCTTCTTCTTCCTCTTTTTTTTTTTTTTAAGGTGTTACTTGGCTGGATCAATTCCAGCATCTTCGGGAGGCTGACGTGA

CircID	chr17:35820332\|35834598
ORF Type	ORF7
Protein Length	64
Nucleotide Length	192
Protein Sequence	VSRDCISALQPGLQSETLVSKKNDRRDVSRYGEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSR*
Nucleotide Sequence	GTGAGCCGAGATTGCATCAGTGCACTCCAGCCTGGGCTACAGAGCGAGACTCTTGTCTCCAAAAAAAATGACCGTCGTGATGTGAGTAGGTATGGAGAAGATAATAGAGGATATGGCGGGTCACAGGGAGGAGGTAGAGGGCGTGGGGGATATGACAAGGATGGAAGAGGTCCTATGACAGGATCAAGGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr17:35820332\|35834598	KHSRP	0	0	2
chr17:35820332\|35834598	MOV10	9	0	2
chr17:35820332\|35834598	FKBP4	0	0	1
chr17:35820332\|35834598	PRPF8	3	3	20
chr17:35820332\|35834598	TNRC6A	0	0	2
chr17:35820332\|35834598	TROVE2	0	0	1
chr17:35820332\|35834598	EIF3H	0	0	1
chr17:35820332\|35834598	DGCR8	3	0	4
chr17:35820332\|35834598	GRWD1	0	0	1
chr17:35820332\|35834598	PTBP1	4	0	4
chr17:35820332\|35834598	DHX9	0	0	7
chr17:35820332\|35834598	DDX3X	5	0	8
chr17:35820332\|35834598	LARP7	1	0	2
chr17:35820332\|35834598	ACIN1	12	0	19
chr17:35820332\|35834598	RANGAP1	1	0	2
chr17:35820332\|35834598	FXR1	2	0	2
chr17:35820332\|35834598	FXR2	3	0	3
chr17:35820332\|35834598	GTF2F1	2	0	4
chr17:35820332\|35834598	RBM47	0	0	1
chr17:35820332\|35834598	SLTM	1	0	4
chr17:35820332\|35834598	EIF4G2	1	0	2
chr17:35820332\|35834598	DDX42	0	0	2
chr17:35820332\|35834598	CSTF2T	3	0	8
chr17:35820332\|35834598	VIM	2	0	2
chr17:35820332\|35834598	RNF219	0	0	1
chr17:35820332\|35834598	XRN2	0	0	2
chr17:35820332\|35834598	UPF1	1	0	1
chr17:35820332\|35834598	YWHAG	1	0	0
chr17:35820332\|35834598	SLBP	1	0	2
chr17:35820332\|35834598	ELAVL1	8	7	12
chr17:35820332\|35834598	CELF2	0	1	4
chr17:35820332\|35834598	PUM2	0	0	1
chr17:35820332\|35834598	YTHDF2	0	0	1
chr17:35820332\|35834598	SRSF7	1	0	4
chr17:35820332\|35834598	SRSF1	8	2	29
chr17:35820332\|35834598	NONO	0	0	2
chr17:35820332\|35834598	ADAR	0	0	23
chr17:35820332\|35834598	U2AF2	19	16	146
chr17:35820332\|35834598	SRSF9	3	0	2
chr17:35820332\|35834598	DDX54	7	0	13
chr17:35820332\|35834598	EFTUD2	0	0	2
chr17:35820332\|35834598	PCBP2	0	0	2
chr17:35820332\|35834598	SF3A3	4	1	3
chr17:35820332\|35834598	ZNF184	4	0	5
chr17:35820332\|35834598	TIAL1	2	0	2
chr17:35820332\|35834598	LIN28B	6	1	19
chr17:35820332\|35834598	LIN28A	2	0	1
chr17:35820332\|35834598	BCCIP	0	0	3
chr17:35820332\|35834598	FTO	1	1	1
chr17:35820332\|35834598	RBFOX2	3	0	0
chr17:35820332\|35834598	SAFB2	0	0	3
chr17:35820332\|35834598	RBM27	0	0	1
chr17:35820332\|35834598	RBM22	2	0	3
chr17:35820332\|35834598	AIFM1	0	0	2
chr17:35820332\|35834598	ATXN2	0	0	1
chr17:35820332\|35834598	EIF4A3	9	1	11
chr17:35820332\|35834598	AGO2	5	0	16
chr17:35820332\|35834598	FAM120A	2	0	7
chr17:35820332\|35834598	CNBP	2	0	1
chr17:35820332\|35834598	RPS5	0	0	2
chr17:35820332\|35834598	RPS3	0	0	2
chr17:35820332\|35834598	TAF15	4	4	6
chr17:35820332\|35834598	GNL3	1	0	0
chr17:35820332\|35834598	FUS	1	1	1
chr17:35820332\|35834598	DROSHA	0	0	1
chr17:35820332\|35834598	NPM1	1	0	0
chr17:35820332\|35834598	HNRNPU	0	0	1
chr17:35820332\|35834598	IGF2BP1	10	0	15
chr17:35820332\|35834598	RBM10	7	4	1
chr17:35820332\|35834598	HNRNPL	0	0	2
chr17:35820332\|35834598	HNRNPM	1	0	3
chr17:35820332\|35834598	RBM15	0	0	1
chr17:35820332\|35834598	HNRNPC	1	0	38
chr17:35820332\|35834598	HNRNPD	1	0	1
chr17:35820332\|35834598	LARP4B	1	0	0
chr17:35820332\|35834598	SMNDC1	5	1	7
chr17:35820332\|35834598	AUH	1	0	4
chr17:35820332\|35834598	HNRNPA1	5	0	30
chr17:35820332\|35834598	SND1	1	0	2
chr17:35820332\|35834598	UCHL5	0	0	1
chr17:35820332\|35834598	IGF2BP3	6	0	10
chr17:35820332\|35834598	IGF2BP2	17	0	70
chr17:35820332\|35834598	HNRNPUL1	0	0	2
chr17:35820332\|35834598	TARDBP	5	0	8
chr17:35820332\|35834598	BUD13	3	1	8
chr17:35820332\|35834598	GEMIN5	0	0	1
chr17:35820332\|35834598	FBL	6	1	7
chr17:35820332\|35834598	NUMA1	0	0	2
chr17:35820332\|35834598	GRSF1	0	0	1
chr17:35820332\|35834598	SF3B4	3	0	3
chr17:35820332\|35834598	FMR1	9	1	15
chr17:35820332\|35834598	CPSF7	0	0	1
chr17:35820332\|35834598	CPSF6	2	0	4
chr17:35820332\|35834598	CSTF2	0	0	2
chr17:35820332\|35834598	QKI	0	0	1
chr17:35820332\|35834598	NOP58	8	2	15
chr17:35820332\|35834598	NOP56	3	0	6
chr17:35820332\|35834598	LSM11	0	0	1
chr17:35820332\|35834598	FIP1L1	0	0	1
chr17:35820332\|35834598	TRA2A	0	0	6
chr17:35820332\|35834598	ZC3H7B	0	0	2
chr17:35820332\|35834598	SBDS	1	0	1
chr17:35820332\|35834598	MSI2	1	1	6
chr17:35820332\|35834598	U2AF1	5	4	20
chr17:35820332\|35834598	AGO1	3	0	1
chr17:35820332\|35834598	SRRM4	0	0	1
chr17:35820332\|35834598	TIA1	2	0	4
chr17:35820332\|35834598	TARBP2	0	0	47
chr17:35820332\|35834598	EWSR1	0	0	2
chr17:35820332\|35834598	ILF3	0	0	1

CircRNA Information