CircRNA Information

General Information
circRNA Basic Information
CircID chr17:38322929|38323057
Strand -
CircType exon
Host Gene ENSG00000278845.3;
Algorism CIRI2;
Sequence AGGGCAGGGATCAGAGTTTGAAATGAAATGTTGTCAGGGTGTTGGAAAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGATGGCAGAAGTGGAAGATGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr17:38322929|38323057
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MLSGCWKNFGEFCTFPLVQAGHGPAFRWQKWKMS
Nucleotide Sequence ATGTTGTCAGGGTGTTGGAAAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGATGGCAGAAGTGGAAGATGAGC

CircID chr17:38322929|38323057
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MKCCQGVGKILVSSAHFPWFRLGMDQPSDGRSGR
Nucleotide Sequence ATGAAATGTTGTCAGGGTGTTGGAAAAATTTTGGTGAGTTCTGCACATTTCCCCTGGTTCAGGCTGGGCATGGACCAGCCTTCAGATGGCAGAAGTGGAAGATGA

CircID chr17:38322929|38323057
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MPSEGWSMPSLNQGKCAELTKIFPTP
Nucleotide Sequence CTGCCATCTGAAGGCTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTTCCAACACCCTGA

CircID chr17:38322929|38323057
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MVHAQPEPGEMCRTHQNFSNTLTTFHFKL
Nucleotide Sequence CTGGTCCATGCCCAGCCTGAACCAGGGGAAATGTGCAGAACTCACCAAAATTTTTCCAACACCCTGACAACATTTCATTTCAAACTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites